Contig 013654:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007A01Sequence597013654 (28)gb|KJB11972.1|2e-82hypothetical protein B456_002G143400 [Gossypium raimondii]696013654 (28)gb|KJB11972.1|2e-73hypothetical protein B456_002G143400 [Gossypium raimondii]
JMFF007F15Sequence599013654 (28)ref|XP_006436218.1|3e-107hypothetical protein CICLE_v10032923mg [Citrus clementina] ref|XP_006485926.1| P824013654 (28)ref|XP_006436218.1|5e-106hypothetical protein CICLE_v10032923mg [Citrus clementina] ref|XP_006485926.1| P
JMFF012C17Sequence599013654 (28)ref|XP_006436218.1|3e-107hypothetical protein CICLE_v10032923mg [Citrus clementina] ref|XP_006485926.1| P784013654 (28)ref|XP_006340395.1|2e-99PREDICTED: ATP synthase subunit d, mitochondrial-like [Solanum tuberosum] gb|AA
JMFF017J08Sequence709013654 (28)ref|XP_006436218.1|1e-106hypothetical protein CICLE_v10032923mg [Citrus clementina] ref|XP_006485926.1| P
JMFF024C15Sequence477013654 (28)gb|KJB11972.1|3e-81hypothetical protein B456_002G143400 [Gossypium raimondii]807013654 (28)ref|XP_006436218.1|4e-106hypothetical protein CICLE_v10032923mg [Citrus clementina] ref|XP_006485926.1| P
JMFF025L07Sequence585013654 (28)ref|XP_006436218.1|3e-107hypothetical protein CICLE_v10032923mg [Citrus clementina] ref|XP_006485926.1| P725013654 (28)ref|XP_006436218.1|2e-106hypothetical protein CICLE_v10032923mg [Citrus clementina] ref|XP_006485926.1| P
JMFF031N01Sequence597013654 (28)ref|XP_006436218.1|3e-107hypothetical protein CICLE_v10032923mg [Citrus clementina] ref|XP_006485926.1| P742013654 (28)ref|XP_006340395.1|8e-98PREDICTED: ATP synthase subunit d, mitochondrial-like [Solanum tuberosum] gb|AA
JMFF034B12Sequence536013654 (28)ref|XP_006436218.1|1e-93hypothetical protein CICLE_v10032923mg [Citrus clementina] ref|XP_006485926.1| P738013654 (28)ref|XP_006436218.1|2e-106hypothetical protein CICLE_v10032923mg [Citrus clementina] ref|XP_006485926.1| P
JMFF035H03Sequence577013654 (28)ref|XP_006436218.1|2e-107hypothetical protein CICLE_v10032923mg [Citrus clementina] ref|XP_006485926.1| P647013654 (28)ref|XP_002529702.1|5e-68ATP synthase D chain, mitochondrial, putative [Ricinus communis] gb|EEF32668.1|
JMFF037F04Sequence606013654 (28)ref|XP_002529702.1|5e-93ATP synthase D chain, mitochondrial, putative [Ricinus communis] gb|EEF32668.1| 704013654 (28)ref|XP_006436218.1|1e-106hypothetical protein CICLE_v10032923mg [Citrus clementina] ref|XP_006485926.1| P
JMFF040M21Sequence403013654 (28)ref|XP_006436217.1|4e-65hypothetical protein CICLE_v10032923mg [Citrus clementina] gb|ESR49457.1| hypoth750013654 (28)ref|XP_006436218.1|2e-106hypothetical protein CICLE_v10032923mg [Citrus clementina] ref|XP_006485926.1| P
JMFF041P07Sequence653013654 (28)ref|XP_006436218.1|6e-107hypothetical protein CICLE_v10032923mg [Citrus clementina] ref|XP_006485926.1| P594013654 (28)ref|XP_002529702.1|5e-82ATP synthase D chain, mitochondrial, putative [Ricinus communis] gb|EEF32668.1|
JMFF046B06Sequence511013654 (28)ref|XP_006436218.1|8e-85hypothetical protein CICLE_v10032923mg [Citrus clementina] ref|XP_006485926.1| P457013654 (28)ref|XP_006340395.1|5e-41PREDICTED: ATP synthase subunit d, mitochondrial-like [Solanum tuberosum] gb|AA
JMFN028A10Sequence490013654 (28)ref|XP_002529702.1|1e-48ATP synthase D chain, mitochondrial, putative [Ricinus communis] gb|EEF32668.1|
JMSF002G23Sequence215013654 (28)ref|XP_006436217.1|7e-19hypothetical protein CICLE_v10032923mg [Citrus clementina] gb|ESR49457.1| hypoth701013654 (28)ref|XP_002529702.1|6e-90ATP synthase D chain, mitochondrial, putative [Ricinus communis] gb|EEF32668.1|

Alignment

This contig is upended


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JMFF037F04-           ATCTTGTAATCGTATCATCTGGTATTGCAATATCGGCGAGCCCTTACATTTCAATACAGA
JMFF041P07-                GTAATCGTATCATCTGGTATTGCAATATCGGCGAGCCCTTACATTT-AATACAGA
JMFF007F15-                GTAATCGTATCATCTGGTATTGCAATATCGGCGAGCCCTTACATTTCAATACAGA
JMFF031N01-                  AATCGTATCATCTGGTATTGCAATATCGGCGAGCCCTTACATTTCAATACAGA
JMFF035H03-                               GGTATTGCAATATCGGCGAGCCCTTACATTTCAATACAGA
JMFF012C17-                  AATCATATCATCTGGTATTGCAATATCGGCGAGCCCTTACATTTCAATACAGA
JMFF025L07-                GTAATCGTATCATCTGGTATTGCAATATCGGCGAGCCCTTACATTTCAATACAGA
JMFF007A01-                                     GCAATATCGGCGAGCCCTTACATTTCAATACAGA
JMFF034B12-                GTAATCGTCTCATCTGGTATTGCAATATCGGCGAGCCCTTACATTTCAATACAGA
JMFF046B06-               TGTAATCGTATCATCTGGTATTGCAATATCGGCGAGCCCTTACATTTCAATACAGA
JMSF002G23-                   ATCGTATCATCTGGTATTGCNATATCGGCGAGCCCTTACNTTTCAATACNGA
JMFF024C15-                GTAATCGTATCATCTGGTATTGCAATATCGGCGAGCCCTTACATTTCAATACAGA
JMFF040M21-               TGTAATCGTATCATCTGGTATTGCAATATCGGCGAGCCCTTACATTTCAATACAGA
rJMFF040M21+              TGTAATCGTATCATCTGGTATTGCAATATCGGCGAGCCCTTACATTTCAATACAGA
rJMFF025L07+                                     CAATATCGGCGAGCCCTTACATTTCAATACAGA
rJMFF017J08+                                                      TACATTTCAATACAGA
rJMFF037F04+                                                           TTCAATACAGA
rJMFF034B12+                                                     TTACATTTCAATACAGA
rJMFF024C15+                                                            TCAATACAGA
                      ____________________________________________________________
consensus             ATCTTGTAATCGTATCATCTGGTATTGCAATATCGGCGAGCCCTTACATTTCAATACAGA
 
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JMFF037F04-           TTCCGGCGTAGAGACAGAAAGAGAGAATGAGCGGAGCAGGGAAGAAGATTGCCGACGTCG
JMFF041P07-           TTCCGGCGTAGAGACAGAAAGAGAGAATGAGCGGAGCAGGGAAGAAGATTGCCGACGTCG
JMFF007F15-           TTCCGGCGTAGAGACAGAAAGAGAGAATGAGCGGAGCAGGGAAGAAGATTGCCGACGTCG
JMFF031N01-           TTCCGGCGTAGAGACAGAAAGAGAGAATGAGCGGAGCAGGGAAGAAGATTGCCGACGTCG
JMFF035H03-           TTCCGGCGTAGAGACAGAAAGAGAGAATGAGCGGAGCAGGGAAGAAGATTGCCGACGTCG
JMFF012C17-           TTCCGGCGTAGAGACAGAAAGAGAGAATGAGCGGAGCAGGGAAGAAGATTGCCGACGTCG
JMFF025L07-           TTCCGGCGTAGAGACAGAAAGAGAGAATGAGCGGAGCAGGGAAGAAGATTGCCGACGTCG
JMFF007A01-           TTCCGGCGTAGAGACAGAAAGAGAGAATGAGCGGAGCAGGGAAGAAGATTGCCGACGTCG
JMFF034B12-           TTCCGGCGTAGAGACAGAAAGAGAGAATGAGCGGAGCAGGGAAGAAGATTGCCGACGTCG
JMFF046B06-           TTCCGGCGTAGAGACAGAAAGAGAGAATGAGCGGAGCAGGGAAGAAGATTGCCGACGTCG
JMSF002G23-           TTCCGGCGTAGAGACGGAAAGANAGAATGANCGGANCAGGGAAGAANATTGCCGACGTCG
JMFF024C15-           TTCCGGCGTAGAGACAGAAAGAGAGAATGAGCGGAGCAGGGAAGAAGATTGCCGACGTCG
JMFF040M21-           TTCCGGCGTAGAGACAGAAAGAGAGAATGAGCGGAGCAGGGAAGAAGATTGCCGACGTCG
rJMFF040M21+          TTCCGGCGTAGAGACAGAAAGAGAGAATGAGCGGAGCAGGGAAGAAGATTGCCGACGTCG
rJMFF025L07+          TTCCGGCGTAGAGACAGAAAGAGAGAATGAGCGGAGCAGGGAAGAAGATTGCCGACGTCG
rJMFF017J08+          TTCCGGCGTAGAGACAGAAAGAGAGAATGAGCGGAGCAGGGAAGAAGATTGCCGACGTCG
rJMFF037F04+          TTCCGGCGTAGAGACAGAAAGAGAGAATGAGCGGAGCAGGGAAGAAGATTGCCGACGTCG
rJMFF034B12+          TTCCGGCGTAGAGACAGAAAGAGAGAATGAGCGGAGCAGGGAAGAAGATTGCCGACGTCG
rJMFF024C15+          TTCCGGCGTAGAGACAGAAAGAGAGAATGAGCGGAGCAGGGAAGAAGATTGCCGACGTCG
rJMFF007F15+              GGCGTAGAGNCAGAAAGAGAGAATGAGCGGAGCAGGGAAGAAGATTGCCGACGTCG
rJMFF012C17+                                                                ACGTCG
                      ____________________________________________________________
consensus             TTCCGGCGTAGAGACAGAAAGAGAGAATGAGCGGAGCAGGGAAGAAGATTGCCGACGTCG
 
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JMFF037F04-           CGTTCAAGGCCGGCAGGACAATCGACTGGGGAAGGGATGGCGAAGCTTCTCGTGTCCGAT
JMFF041P07-           CGTTCAAGGCCGGCAGGACAATCGACT-GGGAAGGGATGGCGAAGCTTCTCGTGTCCGAT
JMFF007F15-           CGTTCAAGGCCGGCAGGACAATCGACT-GGGAAGGGATGGCGAAGCTTCTCGTGTCCGAT
JMFF031N01-           CGTTCAAGGCCGGCAGGACAATCGACT-GGGAAGGGATGGCGAAGCTTCTCGTGTCCGAT
JMFF035H03-           CGTTCAAGGCCGGCAGGACAATCGACT-GGGAAGGGATGGCGAAGCTTCTCGTGTCCGAT
JMFF012C17-           CGTTCAAGGCCGGCAGGACAATCGACT-GGGAAGGGATGGCGAAGCTTCTCGTGTCCGAT
JMFF025L07-           CGTTCAAGGCCGGCAGGACAATCGACT-GGGAAGGGATGGCGAAGCTTCTCGTGTCCGAT
JMFF007A01-           CGTTCAAGGCCGGCAGGACAATCGACT-GGGAAGGGATGGCGAAGCTTCTCGTGTCCGAT
JMFF034B12-           CGTTCAAGGCCGGCAGGACAATCGACT-GGGAAGGGATGGCGAAGCTTCTCGTGTCCGAT
JMFF046B06-           CGTTCAAGGCCGGCAGGACAATCGACT-GGGAAGGGATGGCGAAGCTTCTCGTGTCCGAT
JMSF002G23-           CGTTCAAGGCCGGCAGGACAATCGACT-GGGAAGGGATGGCGAAGCTTCTCGTGTCCGAT
JMFF024C15-           CGTTCAAGGCCGGCAGGACAATCGACT-GGGAAGGGATGGCGAAGCTTCTCGTGTCCGAT
JMFF040M21-           CGTTCAAGGCCGGCAGGACAATCGACT-GGGAAGGGATGGCGAAGCTTCTCGTGTCCGAT
rJMFF040M21+          CGTTCAAGGCCGGCAGGACAATCGACT-GGGAAGGGATGGCGAAGCTTCTCGTGTCCGAT
rJMFF025L07+          CGTTCAAGGCCGGCAGGACAATCGACT-GGGAAGGGATGGCGAAGCTTCTCGTGTCCGAT
rJMFF017J08+          CGTTCAAGGCCGGCAGGACAATCGACT-GGGAAGGGATGGCGAAGCTTCTCGTGTCCGAT
rJMFF037F04+          CGTTCAAGGCCGGCAGGACAATCGACT-GGGAAGGGATGGCGAAGCTTCTCGTGTCCGAT
rJMFF034B12+          CGTTCAAGGCCGGCAGGACAATCGACT-GGGAAGGGATGGCGAAGCTTCTCGTGTCCGAT
rJMFF024C15+          CGTTCAAGGCCGGCAGGACAATCGACT-GGGAAGGGATGGCGAAGCTTCTCGTGTCCGAT
rJMFF031N01+          CGTTCAAGGCCGNCAGGACAATCGACT-GGGAAGGGATGGCGAAGCTTCTCGTGTCCGAT
rJMSF002G23+                                                GGCGAAGCTTCTCGTGTCCGAT
rJMFF007A01+           GTTCAAGGCCGGCAGGACAATCGACT-GGGAAGGGATGGCGAAGCTTCTCGTGTCCGAT
rJMFF007F15+          CGTTCAAGGCCGGCAGGACAATCGACT-GGGAAGGGATGGCGAAGCTTCTCGTGTCCGAT
rJMFF012C17+          CGTTCAAGGCCGGCAGGACAATCGACT-GGGAAGGGATGGCGAAGCTTCTCGTGTCCGAT
                      ____________________________________________________________
consensus             CGTTCAAGGCCGGCAGGACAATCGACT-GGGAAGGGATGGCGAAGCTTCTCGTGTCCGAT
 
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JMFF037F04-           GAGGCTCGCAAGGAGTTCGCTACGCTTCGCCGTGCATTCGATGAGGTCAACTCCCAGCTC
JMFF041P07-           GAGGCTCGCAAGGAGTTCGCTACGCTTCGCCGTGCATTCGATGAGGTCAACTCCCAGCTC
JMFF007F15-           GAGGCTCGCAAGGAGTTCGCTACGCTTCGCCGTGCATTCGATGAGGTCAACTCCCAGCTC
JMFF031N01-           GAGGCTCGCAAGGAGTTCGCTACGCTTCGCCGTGCATTCGATGAGGTCAACTCCCAGCTC
JMFF035H03-           GAGGCTCGCAAGGAGTTCGCTACGCTTCGCCGTGCATTCGATGAGGTCAACTCCCAGCTC
JMFF012C17-           GAGGCTCGCAAGGAGTTCGCTACGCTTCGCCGTGCATTCGATGAGGTCAACTCCCAGCTC
JMFF025L07-           GAGGCTCGCAAGGAGTTCGCTACGCTTCGCCGTGCATTCGATGAGGTCAACTCCCAGCTC
JMFF007A01-           GAGGCTCGCAAGGAGTTCGCTACGCTTCGCCGTGCATTCGATGAGGTCAACTCCCAGCTC
JMFF034B12-           GAGGCTCGCAAGGAGTTCGCTACGCTTCGCCGTGCATTCGATGAGGTCAACTCCCAGCTC
JMFF046B06-           GAGGCTCGCAAGGAGTTCGCTACGCTTCGCCGTGCATTCGATGAGGTCAACTCCCAGCTC
JMSF002G23-           GAGGCTCGCAAGGAGTTCGCTACGCTTCGCCGTGCATTCGAT                  
JMFF024C15-           GAGGCTCGCAAGGAGTTCGCTACGCTTCGCCGTGCATTCGATGAGGTCAACTCCCAGCTC
JMFF040M21-           GAGGCTCGCAAGGAGTTCGCTACGCTTCGCCGTGCATTCGATGAGGTCAACTCCCAGCTC
rJMFF040M21+          GAGGCTCGCAAGGAGTTCGCTACGCTTCGCCGTGCATTCGATGAGGTCAACTCCCAGCTC
rJMFF025L07+          GAGGCTCGCAAGGAGTTCGCTACGCTTCGCCGTGCATTCGATGAGGTCAACTCCCAGCTC
rJMFF017J08+          GAGGCTCGCAAGGAGTTCGCTACGCTTCGCCGTGCATTCGATGAGGTCAACTCCCAGCTC
rJMFF037F04+          GAGGCTCGCAAGGAGTTCGCTACGCTTCGCCGTGCATTCGATGAGGTCAACTCCCAGCTC
rJMFF034B12+          GAGGCTCGCAAGGAGTTCGCTACGCTTCGCCGTGCATTCGATGAGGTCAACTCCCAGCTC
rJMFF024C15+          GAGGCTCGCAAGGAGTTCGCTACGCTTCGCCGTGCATTCGATGAGGTCAACTCCCAGCTC
rJMFF031N01+          GAGGCTCGCAAGGAGTTCGCTACGCTTCGCCGTGCATTCGATGAGGTCAACTCCCAGCTC
rJMSF002G23+          GAGGCTCGCAAGGAGTTCGCTACGCTTCGCCGTGCATTCGATGAGGTCAACTCCCAGCTC
rJMFF007A01+          GAGGCTCGCAAGGAGTTCGCTACGCTTCGCCGTGCATTCGATGAGGTCAACTCCCAGCTC
rJMFF041P07+                       AGTTCGCTACGCTTCGCCGTGCATTCGATGAGGTCAACTCCCAGCTC
rJMFF007F15+          GAGGCTCGCAAGGAGTTCGCTACGCTTCGCCGTGCATTCGATGAGGTCAACTCCCAGCTC
rJMFF012C17+          GAGGCTCGCAAGGAGTTCGCTACGCTTCGCCGTGCATTCGATGAGGTCAACTCCCAGCTC
                      ____________________________________________________________
consensus             GAGGCTCGCAAGGAGTTCGCTACGCTTCGCCGTGCATTCGATGAGGTCAACTCCCAGCTC
 
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JMFF037F04-           CAAACCAAGTTCAGTCAGGAACCAGAACCCATAGACTGGGAGTATTATAGAAAAGGATTA
JMFF041P07-           CAAACCAAGTTCAGTCAGGAACCAGAACCCATAGACTGGGAGTATTATAGAAAAGGATTA
JMFF007F15-           CAAACCAAGTTCAGTCAGGAACCAGAACCCATAGACTGGGAGTATTATAGAAAAGGATTA
JMFF031N01-           CAAACCAAGTTCAGTCAGGAACCAGAACCCATAGACTGGGAGTATTATAGAAAAGGATTA
JMFF035H03-           CAAACCAAGTTCAGTCAGGAACCAGAACCCATAGACTGGGAGTATTATAGAAAAGGATTA
JMFF012C17-           CAAACCAAGTTCAGTCAGGAACCAGAACCCATAGACTGGGAGTATTATAGAAAAGGATTA
JMFF025L07-           CAAACCAAGTTCAGTCAGGAACCAGAACCCATAGACTGGGAGTATTATAGAAAAGGATTA
JMFF007A01-           CAAACCAAGTTCAGTCAGGAACCAGAACCCATAGACTGGGAGTATTATAGAAAAGGATTA
JMFF034B12-           CAAACCAAGTTCAGTCAGGAACCAGAACCCATAGACTGGGAGTATTATAGAAAAGGATTA
JMFF046B06-           CAAACCAAGTTCAGTCAGGAACCAGAACCCATAGACTGGGAGTATTATAGAAAAGGATTA
JMFF024C15-           CAAACCAAGTTCAGTCAGGAACCAGAACCCATAGACTGGGAGTATTATAGAAAAGGATTA
JMFF040M21-           CAAACCAAGTTCAGTCAGGAACCAGAACCCATAGACTGGGAGTATTATAGAAAAGGATTA
rJMFF040M21+          CAAACCAAGTTCAGTCAGGAACCAGAACCCATAGACTGGGAGTATTATAGAAAAGGATTA
rJMFF025L07+          CAAACCAAGTTCAGTCAGGAACCAGAACCCATAGACTGGGAGTATTATAGAAAAGGATTA
rJMFF017J08+          CAAACCAAGTTCAGTCAGGAACCAGAACCCATAGACTGGGAGTATTATAGAAAAGGATTA
rJMFF037F04+          CAAACCAAGTTCAGTCAGGAACCAGAACCCATAGACTGGGAGTATTATAGAAAAGGATTA
rJMFF034B12+          CAAACCAAGTTCAGTCAGGAACCAGAACCCATAGACTGGGAGTATTATAGAAAAGGATTA
rJMFF024C15+          CAAACCAAGTTCAGTCAGGAACCAGAACCCATAGACTGGGAGTATTATAGAAAAGGATTA
rJMFF031N01+          CAAACCAAGTTCAGTCAGGAACCAGAACCCATAGACTGGGAGTATTATAGAAAAGGATTA
rJMSF002G23+          CAAACCAAGTTCAGTCAGGAACCAGAACCCATAGACTGGGAGTATTATAGAAAAGGATTA
rJMFF007A01+          CAAACCAAGTTCAGTCAGGAACCAGAACCCATAGACTGGGAGTATTATAGAAAAGGATTA
rJMFF041P07+          CAAACCAAGTTCAGTCAGGAACCAGAACCCATAGACTGGGAGTATTATAGAAAAGGATTA
rJMFF007F15+          CAAACCAAGTTCAGTCAGGAACCAGAACCCATAGACTGGGAGTATTATAGAAAAGGATTA
rJMFF035H03+               CAAGTTCAGTCAGGANCCAGACCCCATAGACTGGGAGTATTATAGAAAAGGATTA
rJMFF012C17+          CAAACCAAGTTCAGTCAGGAACCAGAACCCATAGACTGGGAGTATTATAGAAAAGGATTA
                      ____________________________________________________________
consensus             CAAACCAAGTTCAGTCAGGAACCAGAACCCATAGACTGGGAGTATTATAGAAAAGGATTA
 
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JMFF037F04-           GGTTCTCGCTTGGTGGATATGTACAAGGAAGCATATGAAAGCATTGAAATCCCTAAATAT
JMFF041P07-           GGTTCTCGCTTGGTGGATATGTACAAGGAAGCATATGAAAGCATTGAAATCCCTAAATAT
JMFF007F15-           GGTTCTCGCTTGGTGGATATGTACAAGGAAGCATATGAAAGCATTGAAATCCCTAAATAT
JMFF031N01-           GGTTCTCGCTTGGTGGATATGTACAAGGAAGCATATGAAAGCATTGAAATCCCTAAATAT
JMFF035H03-           GGTTCTCGCTTGGTGGATATGTACAAGGAAGCATATGAAAGCATTGAAATCCCTAAATAT
JMFF012C17-           GGTTCTCGCTTGGTGGATATGTACAAGGAAGCATATGAAAGCATTGAAATCCCTAAATAT
JMFF025L07-           GGTTCTCGCTTGGTGGATATGTACAAGGAAGCATATGAAAGCATTGAAATCCCTAAATAT
JMFF007A01-           GGTTCTCGCTTGGTGGATATGTACAAGGAGGCATATGAAAGCATTGAAATCCCTAAATAT
JMFF034B12-           GGTTCTCGCTTGGTGGATATGTACAAGGAAGCATATGAAAGCATTGAAATCCCTAAATAT
JMFF046B06-           GGTTCTCGCTTGGTGGATATGTACAAGGAAGCATATGAAAGCATTGAAATCCCTAAATAT
JMFF024C15-           GGTTCTCGCTTGGTGGATATGTACAAGGAAGCATATGAAAGCATTGAAATCCCTAAATAT
JMFF040M21-           GGTTCTCGCTTGGTGGATATGTACAAGGAAGCATATGAAAGCATTGAAATCCCTAAATAT
rJMFF040M21+          GGTTCTCGCTTGGTGGATATGTACAAGGAAGCATATGAAAGCATTGAAATCCCTAAATAT
rJMFF025L07+          GGTTCTCGCTTGGTGGATATGTACAAGGAAGCATATGAAAGCATTGAAATCCCTAAATAT
rJMFF017J08+          GGTTCTCGCTTGGTGGATATGTACAAGGAAGCATATGAAAGCATTGAAATCCCTAAATAT
rJMFF037F04+          GGTTCTCGCTTGGTGGATATGTACAAGGAAGCATATGAAAGCATTGAAATCCCTAAATAT
rJMFF034B12+          GGTTCTCGCTTGGTGGATATGTACAAGGAAGCATATGAAAGCATTGAAATCCCTAAATAT
rJMFF024C15+          GGTTCTCGCTTGGTGGATATGTACAAGGAAGCATATGAAAGCATTGAAATCCCTAAATAT
rJMFF031N01+          GGTTCTCGCTTGGTGGATATGTACAAGGAAGCATATGAAAGCATTGAAATCCCTAAATAT
rJMSF002G23+          GGTTCTCGCTTGGTGGATATGTACAAGGAAGCATATGAAAGCATTGAAATCCCTAAATAT
rJMFF007A01+          GGTTCTCGCTTGGTGGATATGTACAAGGAGGCATATGAAAGCATTGAAATCCCTAAATAT
rJMFF041P07+          GGTTCTCGCTTGGTGGATATGTACAAGGAAGCATATGAAAGCATTGAAATCCCTAAATAT
JMFN028A10-             TTCTCGCTTGGTGGATATGT-CAAGGAAGCATATGAAAGCATTGAAATCCCTAAATAT
rJMFF007F15+          GGTTCTCGCTTGGTGGATATGTACAAGGAAGCATATGAAAGCATTGAAATCCCTAAATAT
rJMFF035H03+          GGTTCTCGCTTGGTGGATATGTACAAGGAAGCATATGAAAGCATTGAAATCCCTAAATAT
rJMFF012C17+          GGTTCTCGCTTGGTGGATATGTACAAGGAAGCATATGAAAGCATTGAAATCCCTAAATAT
                      ____________________________________________________________
consensus             GGTTCTCGCTTGGTGGATATGTACAAGGAAGCATATGAAAGCATTGAAATCCCTAAATAT
 
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JMFF037F04-           GTGGACAAAGTCACACCCCAATATAAACCCAAGTTTGATGCCTTGTTGGTTGAGCTGAAA
JMFF041P07-           GTGGACAAAGTCACACCCCAATATAAACCCAAGTTTGATGCCTTGTTGGTTGAGCTGAAA
JMFF007F15-           GTGGACAAAGTCACACCCCAATATAAACCCAAGTTTGATGCCTTGTTGGTTGAGCTGAAA
JMFF031N01-           GTGGACAAAGTCACACCCCAATATAAACCCAAGTTTGATGCCTTGTTGGTTGAGCTGAAA
JMFF035H03-           GTGGACAAAGTCACACCCCAATATAAACCCAAGTTTGATGCCTTGTTGGTTGAGCTGAAA
JMFF012C17-           GTGGACAAAGTCACACCCCAATATAAACCCAAGTTTGATGCCTTGTTGGTTGAGCTGAAA
JMFF025L07-           GTGGACAAAGTCACACCCCAATATAAACCCAAGTTTGATGCCTTGTTGGTTGAGCTGAAA
JMFF007A01-           GTGGACAAAGTCACACCCCAATATAAACCCAAGTTTGATGCCTTGTTGGTTGTGCTGAAA
JMFF034B12-           GTGGACAAAGTCACACCCCAATATAAACCCAAGTTTGATGCCTTGTTGGTTGAGCTGAAA
JMFF046B06-           GTGGACAAAGTCACACCCCAATATAAACCCAAGTTTGATGCCTTGTTGGTTGAGCTGAAA
JMFF024C15-           GTGGACAAAGTCACACCCCAATATAAACCCAAGTTTGATGCCTTGTTGGTTGAGCTGAAA
JMFF040M21-           GTGGACAAAGTCACACCCCAATATAAACCCAAGTTTGATGCCTT                
rJMFF040M21+          GTGGACAAAGTCACACCCCAATATAAACCCAAGTTTGATGCCTTGTTGGTTGAGCTGAAA
rJMFF025L07+          GTGGACAAAGTCACACCCCAATATAAACCCAAGTTTGATGCCTTGTTGGTTGAGCTGAAA
rJMFF017J08+          GTGGACAAAGTCACACCCCAATATAAACCCAAGTTTGATGCCTTGTTGGTTGAGCTGAAA
rJMFF037F04+          GTGGACAAAGTCACACCCCAATATAAACCCAAGTTTGATGCCTTGTTGGTTGAGCTGAAA
rJMFF034B12+          GTGGACAAAGTCACACCCCAATATAAACCCAAGTTTGATGCCTTGTTGGTTGAGCTGAAA
rJMFF046B06+             GACAAAGTCACACCNCAATATAAACCCAAGTTTGATGCCTTGTTGGTTGAGCTGAAA
rJMFF024C15+          GTGGACAAAGTCACACCCCAATATAAACCCAAGTTTGATGCCTTGTTGGTTGAGCTGAAA
rJMFF031N01+          GTGGACAAAGTCACACCCCAATATAAACCCAAGTTTGATGCCTTGTTGGTTGAGCTGAAA
rJMSF002G23+          GTGGACAAAGTCACACCCCAATATAAACCCAAGTTTGATGCCTTGTTGGTTGAGCTGAAA
rJMFF007A01+          GTGGACAAAGTCACACCCCAATATAAACCCAAGTTTGATGCCTTGTTGGTTGTGCTGAAA
rJMFF041P07+          GTGGACAAAGTCACACCCCAATATAAACCCAAGTTTGATGCCTTGTTGGTTGAGCTGAAA
JMFN028A10-           GTGGACAAAGTCACACCCCAATATAAACCCAAGTTTGATGCCTTGTTGGTTGAGCTGAAA
rJMFF007F15+          GTGGACAAAGTCACACCCCAATATAAACCCAAGTTTGATGCCTTGTTGGTTGAGCTGAAA
rJMFF035H03+          GTGGACAAAGTCACACCCCAATATAAACCCAAGTTTGATGCCTTGTTGGTTGAGCTGAAA
rJMFF012C17+          GTGGACAAAGTCACACCCCAATATAAACCCAAGTTTGATGCCTTGTTGGTTGAGCTGAAA
                      ____________________________________________________________
consensus             GTGGACAAAGTCACACCCCAATATAAACCCAAGTTTGATGCCTTGTTGGTTGAGCTGAAA
 
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JMFF037F04-           GACGCTGAGAAGCAATCACTGAAGGAGTCTGAAAGATTGGAAAAAGAAATTGCAGATGTC
JMFF041P07-           GACGCTGAGAAGCAATCACTGAAGGAGTCTGAAAGATTGGAAAAAGAAATTGCAGATGTC
JMFF007F15-           GACGCTGAGAAGCAATCACTGAAGGAGTCTGAAAGATTGGAAAAAGAAATTGCAGATGTC
JMFF031N01-           GACGCTGAGAAGCAATCACTGAAGGAGTCTGAAAGATTGGAAAAAGAAATTGCAGATGTC
JMFF035H03-           GACGCTGAGAAGCAATCACTGAAGGAGTCTGAAAGATTGGAAAAAGAAATTGCAGATGTC
JMFF012C17-           GACGCTGAGAAGCAATCACTGAAGGAGTCTGAAAGATTGGAAAAAGAAATTGCAGATGTC
JMFF025L07-           GACGCTGAGAAGCAATCACTGAAGGAGTCTGAAAGATTGGAAAAAGAAATTGCAGATGTC
JMFF007A01-           GACGCTGAGAAGCAATCACTGAAGGAGTCTGAAAGATTGGAAAAAGAAATTGCAGATGTC
JMFF034B12-           GACGCTGAGAAGCAATCACTGAAGGAGTCTGAAAGATTGGAAAAAGAAATTGCAGATGTC
JMFF046B06-           GACGCTGAGAAGCAATCACTGAAGGAGTCTGANAGATTGGGAAAAGAAATTGCAGATGTC
JMFF024C15-           GACGCTGAGAAGCAATCACTGAAGGAGTCTGAAAGATTGGAAAAAGAAATTGCAGATGTC
rJMFF040M21+          GACGCTGAGAAGCAATCACTGAAGGAGTCTGAAAGATTGGAAAAAGAAATTGCAGATGTC
rJMFF025L07+          GACGCTGAGAAGCAATCACTGAAGGAGTCTGAAAGATTGGAAAAAGAAATTGCAGATGTC
rJMFF017J08+          GACGCTGAGAAGCAATCACTGAAGGAGTCTGAAAGATTGGAAAAAGAAATTGCAGATGTC
rJMFF037F04+          GACGCTGAGAAGCAATCACTGAAGGAGTCTGAAAGATTGGAAAAAGAAATTGCAGATGTC
rJMFF034B12+          GACGCTGAGAAGCAATCACTGAAGGAGTCTGAAAGATTGGAAAAAGAAATTGCAGATGTC
rJMFF046B06+          GACGCTGAGAAGCAATCACTGAAGGAGTCTGAAAGATTGGAAAAAGAAATTGCAGATGTC
rJMFF024C15+          GACGCTGAGAAGCAATCACTGAAGGAGTCTGAAAGATTGGAAAAAGAAATTGCAGATGTC
rJMFF031N01+          GACGCTGAGAAGCAATCACTGAAGGAGTCTGAAAGATTGGAAAAAGAAATTGCAGATGTC
rJMSF002G23+          GACGCTGAGAAGCAATCACTGAAGGAGTCTGAAAGATTGGAAAAAGAAATTGCAGATGTC
rJMFF007A01+          GACGCTGAGAAGCAATCACTGAAGGAGTCTGAAAGATTGGAAAAAGAAATTGCAGATGTC
rJMFF041P07+          GACGCTGAGAAGCAATCACTGAAGGAGTCTGAAAGATTGGAAAAAGAAATTGCAGATGTC
JMFN028A10-           GACGCTGAGAAGCAATCACTGAAGGAGTCTGAAAGATTGGAAAAAGAAATTGCAGATGTC
rJMFF007F15+          GACGCTGAGAAGCAATCACTGAAGGAGTCTGAAAGATTGGAAAAAGAAATTGCAGATGTC
rJMFF035H03+          GACGCTGAGAAGCAATCACTGAAGGAGTCTGAAAGATTGGAAAAAGAAATTGCAGATGTC
rJMFF012C17+          GACGCTGAGAAGCAATCACTGAAGGAGTCTGAAAGATTGGAAAAAGAAATTGCAGATGTC
                      ____________________________________________________________
consensus             GACGCTGAGAAGCAATCACTGAAGGAGTCTGAAAGATTGGAAAAAGAAATTGCAGATGTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF037F04-           CAAGAGCTAAAG-AAAAAACTCAGCACGATGACAGCAGAGGAATACTTTGCTAAGCACCC
JMFF041P07-           CAAGAGCTAAAG-AAAAAACTCAGCACGATGACAGCAGAGGAATACTTTGCTAAGCACCC
JMFF007F15-           CAAGAGCTAAAG-AAAAAACTCAGCACGATGACAGCAGAGGAATACTTTGCTAAGCACCC
JMFF031N01-           CAAGAGCTAAAG-AAAAAACTCAGCACGATGACAGCAGAGGAATACTTTGCTAAGCACCC
JMFF035H03-           CAAGAGCTAAAG-AAAAAACTCAGCACGATGACAGCAGAGGAATACTTTGCTAAGCACCC
JMFF012C17-           CAAGAGCTAAAG-AAAAAACTCAGCACGATGACAGCAGAGGAATACTTTGCTAAGCACCC
JMFF025L07-           CAAGAGCTAAAG-AAAAAACTCAGCACGATGACAGCAGAGGAATACTTTGCTAAGCACCC
JMFF007A01-           CAAGAGCTAAAGAAAAAAACTCAGCACGATGACAGCAGAGGAATACTTTGCTAAGCACCC
JMFF034B12-           CAAGAGCTAAAG-AAAAAACTCAGCACGATGACAGCAGAGGAATACTTTGCTAAGCACCC
JMFF046B06-           CNAGAGCTAAAG-AAAAAACTCAGCACGATGACAGCA                       
JMFF024C15-           CAA                                                         
rJMFF040M21+          CAAGAGCTAAAG-AAAAAACTCAGCACGATGACAGCAGAGGAATACTTTGCTAAGCACCC
rJMFF025L07+          CAAGAGCTAAAG-AAAAAACTCAGCACGATGACAGCAGAGGAATACTTTGCTAAGCACCC
rJMFF017J08+          CAAGAGCTAAAG-AAAAAACTCAGCACGATGACAGCAGAGGAATACTTTGCTAAGCACCC
rJMFF037F04+          CAAGAGCTAAAG-AAAAAACTCAGCACGATGACAGCAGAGGAATACTTTGCTAAGCACCC
rJMFF034B12+          CAAGAGCTAAAG-AAAAAACTCAGCACGATGACAGCAGAGGAATACTTTGCTAAGCACCC
rJMFF046B06+          CAAGAGCTAAAG-AAAAAACTCAGCACGATGACAGCAGAGGAATACTTTGCTAAGCACCC
rJMFF024C15+          CAAGAGCTAAAG-AAAAAACTCAGCACGATGACAGCAGAGGAATACTTTGCTAAGCACCC
rJMFF031N01+          CAAGAGCTAAAG-AAAAAACTCAGCACGATGACAGCAGAGGAATACTTTGCTAAGCACCC
rJMSF002G23+          CAAGAGCTAAAG-AAAAAACTCAGCACGATGACAGCAGAGGAATACTTTGCTAAGCACCC
rJMFF007A01+          CAAGAGCTAAAGAAAAAAACTCAGCACGATGACAGCAGAGGAATACTTTGCTAAGCACCC
rJMFF041P07+          CAAGAGCTAAAG-AAAAAACTCAGCACGATGACAGCAGAGGAATACTTTGCTAAGCACCC
JMFN028A10-           CAAGAGCTAAAG-AAAAAACTCAGCACGATGACAGCAGAGGAATACTTTGCTAAGCACCC
rJMFF007F15+          CAAGAGCTAAAG-AAAAAACTCAGCACGATGACAGCAGAGGAATACTTTGCTAAGCACCC
rJMFF035H03+          CAAGAGCTAAAG-AAAAAACTCAGCACGATGACAGCAGAGGAATACTTTGCTAAGCACCC
rJMFF012C17+          CAAGAGCTAAAG-AAAAAACTCAGCACGATGACAGCAGAGGAATACTTTGCTAAGCACCC
                      ____________________________________________________________
consensus             CAAGAGCTAAAG-AAAAAACTCAGCACGATGACAGCAGAGGAATACTTTGCTAAGCACCC
 
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JMFF037F04-           CGAACTAAAGAAGAAGTTCGATGATGAAATTCGAAATGATTACTGGGGTTACTAGTCAAG
JMFF041P07-           CGAACTAAAGAAGAAGTTCGATGATGAAATTCGAAATGATTACTGGGGTTACTAGTCAAG
JMFF007F15-           CGAACTAAAGAAGAAGTTCGATGATGAAATTCGAAATGATTACTGGGGTTACTAGTCAAG
JMFF031N01-           CGAACTAAAGAAGAAGTTCGATGATGAAATTCGAAATGATTACTGGGGTTACTAGTCAAG
JMFF035H03-           CGAACTAAAGAAGAAGTTCGATGATGAAATTCGAAATGATTACTGGGGTTACTAGTCAA 
JMFF012C17-           CGAACTAAAGAAGAAGTTCGATGATGAAATTCGAAATGATTACTGGGGTTACTAGTCAAG
JMFF025L07-           CGAACTAAAGAAGAAGTTCGATGATGAAATTCGAAATGATTACTGGGGTTAC        
JMFF007A01-           CGAACTAAAGAAGAAGTTCGATGATGAAATTCGAAATGATTACTGGGGTTACTAGTCAAG
JMFF034B12-           CGA                                                         
rJMFF040M21+          CGAACTAAAGAAGAAGTTCGATGATGAAATTCGAAATGATTACTGGGGTTACTAGTCAAG
rJMFF025L07+          CGAACTAAAGAAGAAGTTCGATGATGAAATTCGAAATGATTACTGGGGTTACTAGTCAAG
rJMFF017J08+          CGAACTAAAGAAGAAGTTCGATGATGAAATTCGAAATGATTACTGGGGTTACTAGTCAAG
rJMFF037F04+          CGAACTAAAGAAGAAGTTCGATGATGAAATTCGAAATGATTACTGGGGTTACTAGTCAAG
rJMFF034B12+          CGAACTAAAGAAGAAGTTCGATGATGAAATTCGAAATGATTACTGGGGTTACTAGTCAAG
rJMFF046B06+          CGAACTAAAGAAGAAGTTCGATGATGAAATTCGAAATGATTACTGGGGTTACTAGTCAAG
rJMFF024C15+          CGAACTAAAGAAGAAGTTCGATGATGAAATTCGAAATGATTACTGGGGTTACTAGTCAAG
rJMFF031N01+          CGAACTAAAGAAGAAGTTCGATGATGAAATTCGAAATGATTACTGGGGTTACTAGTCAAG
rJMSF002G23+          CGAACTAAAGAAGAAGTTCGATGATGAAATTCGAAATGATTACTGGGGTTACTAGTCAAG
rJMFF007A01+          CGAACTAAAGAAGAAGTTCGATGATGAAATTCGAAATGATTACTGGGGTTACTAGTCAAG
rJMFF041P07+          CGAACTAAAGAAGAAGTTCGATGATGAAATTCGAAATGATTACTGGGGTTACTAGTCAAG
JMFN028A10-           CGAACTAAAGAAGAAGTTCGATGATGAAATTCGAAATGATTACTGGGGTTACTAGTCAAG
rJMFF007F15+          CGAACTAAAGAAGAAGTTCGATGATGAAATTCGAAATGATTACTGGGGTTACTAGTCAAG
rJMFF035H03+          CGAACTAAAGAAGAAGTTCGATGATGAAATTCGAAATGATTACTGGGGTTACTAGTCAAG
rJMFF012C17+          CGAACTAAAGAAGAAGTTCGATGATGAAATTCGAAATGATTACTGGGGTTACTAGTCAAG
                      ____________________________________________________________
consensus             CGAACTAAAGAAGAAGTTCGATGATGAAATTCGAAATGATTACTGGGGTTACTAGTCAAG
 
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JMFF037F04-           TCATTGT                                                     
JMFF041P07-           TCATTGTCACCAAGAAGTCTAGCTTCACTTGTTGGTGAACCATTNTGAGTTCATCCTTGG
JMFF007F15-           TCATTG                                                      
JMFF031N01-           TCATTG                                                      
JMFF012C17-           TCATTGTC                                                    
JMFF007A01-           TCATTGTCACCAAGAAGTCTAGCT                                    
rJMFF040M21+          TCATTGTCACCAAGAAGTCTAGCTTCACTTGTTGGTGAACCATTTTGAGTTCATCCTTGG
rJMFF025L07+          TCATTGTCACCAAGAAGTCTAGCTTCACTTGTTGGTGAACCATTTTGAGTTCATCCTTGG
rJMFF017J08+          TCATTGTCACCAAGAAGTCTAGCTTCACTTGTTGGTGAACCATTTTGAGTTCATCCTTGG
rJMFF037F04+          TCATTGTCACCAAGAAGTCTAGCTTCACTTGTTGGTGAACCATTTTGAGTTCATCCTTGG
rJMFF034B12+          TCATTGTCACCAAGAAGTCTAGCTTCACTTGTTGGTGAACCATTTTGAGTTCATCCTTGG
rJMFF046B06+          TCATTGTCACCAAGAAGTCTAGCTTCACTTGTTGGTGAACCATTTTGAGTTCATCCTTGG
rJMFF024C15+          TCATTGTCACCAAGAAGTCTAGCTTCACTTGTTGGTGAACCATTTTGAGTTCATCCTTGG
rJMFF031N01+          TCATTGTCACCAAGAAGTCTAGCTTCACTTGTTGGTGAACCATTTTGAGTTCATCCTTGG
rJMSF002G23+          TCATTGTCACCAAGAAGTCTAGCTTCACTTGTTGGTGAACCATTTTGAGTTCATCCTTGG
rJMFF007A01+          TCATTGTCACCAAGAAGTCTAGCTTCACTTGTTGGTGAACCATTTTGAGTTCATCCTTGG
rJMFF041P07+          TCATTGTCACCAAGAAGTCTAGCTTCACTTGTTGGTGAACCATTTTGAGTTCATCCTTGG
JMFN028A10-           TCATTGTCACCAAGAAGTCTAGCTTCACTTGTTGGTGAACCATTTTGAGTTCATCCTTGG
rJMFF007F15+          TCATTGTCACCAAGAAGTCTAGCTTCACTTGTTGGTGAACCATTTTGAGTTCATCCTTGG
rJMFF035H03+          TCATTGTCACCAAGAAGTCTAGCTTCACTTGTTGGTGAACCATTTTGAGTTCATCCTTGG
rJMFF012C17+          TCATTGTCACCAAGAAGTCTAGCTTCACTTGTTGGTGAACCATTTTGAGTTCATCCTTGG
                      ____________________________________________________________
consensus             TCATTGTCACCAAGAAGTCTAGCTTCACTTGTTGGTGAACCATTTTGAGTTCATCCTTGG
 
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JMFF041P07-           T                                                           
rJMFF040M21+          TTTAGAAATAAAAGAGGATTATATGTGTGCCGTTTCATTTCATCAGTTACTTGGAGAACT
rJMFF025L07+          TTTAGAAATAAAAGAGGATTATATGTGTGCCGTTTCATTTCATCAGTTACTTGGAGAACT
rJMFF017J08+          TTTAGAAATAAAAGAGGATTATATGTGTGCCGTTTCATTTCATCAGTTACTTGGAGAACT
rJMFF037F04+          TTTAGAAATAAAAGAGGATTATATGTGTGCCGTTTCATTTCATCAGTTACTTGGAGAACT
rJMFF034B12+          TTTAGAAATAAAAGAGGATTATATGTGTGCCGTTTCATTTCATCAGTTACTTGGAGAACT
rJMFF046B06+          TTTAGAAATAAAAGAGGATTATATGTGTGCCGTTTCATTTCATCAGTTACTTGGAGAACT
rJMFF024C15+          TTTAGAAATAAAAGAGGATTATATGTGTGCCGTTTCATTTCATCAGTTACTTGGAGAACT
rJMFF031N01+          TTTAGAAATAAAAGAGGATTATATGTGTGCCGTTTCATTTCATCAGTTACTTGGAGAACT
rJMSF002G23+          TTTAGAAATAAAAGAGGATTATATGTGTGCCGTTTCATTTCATCAGTTACTTGGAGAACT
rJMFF007A01+          TTTAGAAATAAAAGAGGATTATATGTGTGCCGTTTCATTTCATCAGTTACTTGGAGAACT
rJMFF041P07+          TTTAGAAATAAAAGAGGATTATATGTGTGCCGTTTCATTTCATCAGTTACTTGGAGAACT
JMFN028A10-           TTTAAAAATAAAAGAGGATTATATGTGTGCCGTTTCATTTCATCAGTTACTTGGAGAACT
rJMFF007F15+          TTTAGAAATAAAAGAGGATTATATGTGTGCCGTTTCATTTCATCAGTTACTTGGAGAACT
rJMFF035H03+          TTTAGAAATAAAAGAGGATTATATGTGTGCCGTTTCATTTCATCAGTTACTTGGAGAACT
rJMFF012C17+          TTTAGAAATAAAAGAGGATTATATGTGTGCCGTTTCATTTCATCAGTTACTTGGAGAACT
                      ____________________________________________________________
consensus             TTTAGAAATAAAAGAGGATTATATGTGTGCCGTTTCATTTCATCAGTTACTTGGAGAACT
 
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rJMFF040M21+          TGTTTTTCGGTATGCCCTGCTT                                      
rJMFF025L07+          TGTTTTTCGGTATGCCCTGCTT                                      
rJMFF017J08+          TGTTTTTCGGTATGCCCTGCTTTGGAGATAAATCA                         
rJMFF037F04+          TGTTTTTCGGTATGCCCTGCTTTGGAGATAAATCA                         
rJMFF034B12+          TGTTTTTCGGTATGCCCTGCTTTGGAGATAAATCATTCAGGGTCTCTGATCATCCCTAAC
rJMFF046B06+          TGTTTTTCGGTATGCCCTGCTTTGGAGATAAATCATTCAGGGTCTCTGATCATCCCTAAC
rJMFF024C15+          TGTTTTTCGGTATGCCCTGCTTTGGAGATAAATCATTCAGGGTCTCTGATCATCCCTAAC
rJMFF031N01+          TGTTTTTCGGTATGCCCTGCTTTGGAGATAAATCATTCAGGGTCTCTGATCATCCCTAAC
rJMSF002G23+          TGTTTTTCGGTATGCCCTGCTTTGGAGATAAATCATTCAGGGTCTCTGATCATCCCTAAC
rJMFF007A01+          TGTTTTTCGGTATGCCCTGCTTTGGAGATAAATCATTCAGGGTCTCTGATCATCCCTAAC
rJMFF041P07+          TGTTTTTCGGTATGCCCTGCTTTGGAGATAAATCATTCAGGGTCTCTGATCATCCCTAAC
JMFN028A10-           TGTTTTTCGGTATGCCCTGCTTTGGAGA-AAATCATTCAGGGTCTCTGATCATCCCTAAC
rJMFF007F15+          TGTTTTTCGGTATGCCCTGCTTTGGAGATAAATCATTCAGGGTCTCTGATCATCCCTAAC
rJMFF035H03+          TGTTTTTCGGTATGCCCTGCTTTGGAGATAAATCATTCAGGGTCTCTGATCATCCCTAAC
rJMFF012C17+          TGTTTTTCGGTATGCCCTGCTTTGGAGATAAATCATTCAGGGTCTCTGATCATCCCTAAC
                      ____________________________________________________________
consensus             TGTTTTTCGGTATGCCCTGCTTTGGAGATAAATCATTCAGGGTCTCTGATCATCCCTAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF034B12+          A                                                           
rJMFF046B06+          A                                                           
rJMFF024C15+          ATTTCTTGATTCTGAAATTCTCTATTTCTTCTGTTTTATGTTCCAACCGGGATGGATGCC
rJMFF031N01+          ATTTCTTGATTCTGAGATTCTCTATTTCTTCTGTTTTATGTTCCAACCGGGATGGATGCC
rJMSF002G23+          ATTTCTTGATTCTGAGATTCTCTATTTCTTCTGTTTTATGTTCCAACCGGGATGGATGCC
rJMFF007A01+          ATTTCTTGATTCTGAGATTCTCTATTTCTTCTGTTTTA                      
rJMFF041P07+          ATTTCT                                                      
JMFN028A10-           ATTTCTTGATTCTGA                                             
rJMFF007F15+          ATTTCTTGATTCTGAGATTCTCTATTTCTTCTGTTTTATGTTCCAACCGGGATGGATGCC
rJMFF035H03+          ATTTCTTGATTCTGAGATTCTCTATTTCTTCTGTTTTATGTTCCAACCGGGATGGATGCC
rJMFF012C17+          ATTTCTTGATTCTGAGATTCTCTATTTCTTCTGTTTTATGTTCCAACCGGGATGGATGCC
                      ____________________________________________________________
consensus             ATTTCTTGATTCTGAGATTCTCTATTTCTTCTGTTTTATGTTCCAACCGGGATGGATGCC
 
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rJMFF024C15+          TTGTATATCTCTTCTCTTT                                         
rJMFF031N01+          TTGTATATCTCTTCTCTTTTGATT                                    
rJMFF007F15+          TTGTATATCTCTTCTCTTTTGA-TTTGAAATTGAAGTATGCAAATAAACAA         
rJMFF035H03+          TTGTATATCTCTTCTCTTTTGATTTTGAAATTGGAGTATGCAAATAAACAA         
rJMFF012C17+          TTGTATATCTCTTCTCTTTTGATTTTGAAATTGAAGTATGCAAATAAACAAATCCTTTCG
                      ____________________________________________________________
consensus             TTGTATATCTCTTCTCTTTTGATTTTGAAATTGAAGTATGCAAATAAACAAATCCTTTCG