Contig 013653:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012B21Sequence532007325 (4)ref|XP_006356916.1|1e-28PREDICTED: glutamate receptor 3.4-like isoform X1 [Solanum tuberosum] ref|XP_006736013653 (2)ref|XP_006367285.1|2e-29PREDICTED: glutamate receptor 3.4-like isoform X1 [Solanum tuberosum] ref|XP_006
JMFF013A05Sequence488007325 (4)ref|XP_006356916.1|7e-21PREDICTED: glutamate receptor 3.4-like isoform X1 [Solanum tuberosum] ref|XP_006799013653 (2)ref|XP_006367285.1|2e-45PREDICTED: glutamate receptor 3.4-like isoform X1 [Solanum tuberosum] ref|XP_006

Alignment

This contig is upended


. : . : . : . : . : . :
rJMFF013A05+ AAGAGTGGATGGGGCTTTGCATTTCAAAGAGAC
                      ____________________________________________________________
consensus AAGAGTGGATGGGGCTTTGCATTTCAAAGAGAC
 
. : . : . : . : . : . :
rJMFF013A05+ TCCCCTCTGGCTGTAGATATGTCAACTGCAATCCTGCAACTCTTTGAGAAAAGAGAACTC
rJMFF012B21+ TGAGAAAAGAGAACTC
                      ____________________________________________________________
consensus TCCCCTCTGGCTGTAGATATGTCAACTGCAATCCTGCAACTCTTTGAGAAAAGAGAACTC
 
. : . : . : . : . : . :
rJMFF013A05+ CAAAAAATCCACGACAAATGGCTCCCCAGAGATGATTGCGCGATCCAAGACAACCAAATT
rJMFF012B21+ CAAAAAATCCACGACAAATGGCTCCCCAGAGATGATTGCGCGATCCAAGACAACCAAATT
                      ____________________________________________________________
consensus CAAAAAATCCACGACAAATGGCTCCCCAGAGATGATTGCGCGATCCAAGACAACCAAATT
 
. : . : . : . : . : . :
rJMFF013A05+ GATGACAACCGGCTTTCCCTCAAGAGTTTCTGGGGCCTGTTTCTGATCTGCGGTGTGGCT
rJMFF012B21+ GATGACAACCGGCTTTCCCTCAAGAGTTTCTGGGGCCTGTTTCTGATCTGCGGTGTGGCT
                      ____________________________________________________________
consensus GATGACAACCGGCTTTCCCTCAAGAGTTTCTGGGGCCTGTTTCTGATCTGCGGTGTGGCT
 
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rJMFF013A05+ TGCTTCATTGCTCTTCTGTTGTTTTCCTGCAGGGTGTGCTGGCAGTATCGCAGGTATACA
rJMFF012B21+ TGCTTCATTGCTCTTCTGTTGTTTTCCTGCAGGGTGTGCTGGCAGTATCGCAGGTATACA
                      ____________________________________________________________
consensus TGCTTCATTGCTCTTCTGTTGTTTTCCTGCAGGGTGTGCTGGCAGTATCGCAGGTATACA
 
. : . : . : . : . : . :
rJMFF013A05+ CCCGAGGCTAGGGAACAGGAGATCCCTGCTACGCCTGAGCCCGGGCCATCCGACAGCTGC
rJMFF012B21+ CCCGAGGCTAGGGAACAGGAGATCCCTGCTACGCCTGAGCCCGGGCCATCCGACAGCTGC
                      ____________________________________________________________
consensus CCCGAGGCTAGGGAACAGGAGATCCCTGCTACGCCTGAGCCCGGGCCATCCGACAGCTGC
 
. : . : . : . : . : . :
rJMFF013A05+ AGCCTTCAAGGCCTGATCAAATTTGTTGATCAAAAAGAAGCTGAAATTAAAGAAATCCTG
rJMFF012B21+ AGCCTTCAAGGCCTGATCAAATTTGTTGATCAAAAAGAAGCTGAAATTAAAGAAATCCTG
                      ____________________________________________________________
consensus AGCCTTCAAGGCCTGATCAAATTTGTTGATCAAAAAGAAGCTGAAATTAAAGAAATCCTG
 
. : . : . : . : . : . :
rJMFF013A05+ AAAAAGAAGGCCACTAGTGAAAACAAGCCACAACTTACTCAAAGCTCAGATGTGCAGGAA
rJMFF012B21+ AAAAAGAAGGCCACTAGTGAAAACAAGCCACAACTTACTCAAAGCTCAGATGTGCAGGAA
                      ____________________________________________________________
consensus AAAAAGAAGGCCACTAGTGAAAACAAGCCACAACTTACTCAAAGCTCAGATGTGCAGGAA
 
. : . : . : . : . : . :
rJMFF013A05+ AGCGCACCCTGAGAATGACATTCAGCAGGCTTTGTCACACTTGTTTTTGTACATGATCCA
rJMFF012B21+ AGCGCACCCTGAGAATGACATTCAGCAGGCTTTGTCACACTTGTTTTTGTACATGATCCA
                      ____________________________________________________________
consensus AGCGCACCCTGAGAATGACATTCAGCAGGCTTTGTCACACTTGTTTTTGTACATGATCCA
 
. : . : . : . : . : . :
rJMFF013A05+ TACAATTCCTTGCACTCATCTAATCACTGCCCCATGTCACATCAGATTTGTTCTGTAGGG
rJMFF012B21+ TACAATTCCTTGCACTCATCTAATCACTGCCCCATGTCACATCAGATTTGTTCTGTAGGG
                      ____________________________________________________________
consensus TACAATTCCTTGCACTCATCTAATCACTGCCCCATGTCACATCAGATTTGTTCTGTAGGG
 
. : . : . : . : . : . :
rJMFF013A05+ ATAGCAGAATGTGTTTACACCTTTGTAGGAAAATATAGATGAAACTGGCAAAAAGATTTG
rJMFF012B21+ ATAGCAGAATGTGTTTACACCTTTGTAGGAAAATATAGATGAAACTGGCAAAAAGATTTG
                      ____________________________________________________________
consensus ATAGCAGAATGTGTTTACACCTTTGTAGGAAAATATAGATGAAACTGGCAAAAAGATTTG
 
. : . : . : . : . : . :
rJMFF013A05+ TAATTTTGGTTGGCAAGGTGCACAAGATTCCTGCATCAGACAAGTCAAAACTGGGAAGAA
rJMFF012B21+ TAATTTTGGTTGGCAAGGTGCACAAGATTCCTGCATCAGACAAGTCAAAACTGGGAAGAA
                      ____________________________________________________________
consensus TAATTTTGGTTGGCAAGGTGCACAAGATTCCTGCATCAGACAAGTCAAAACTGGGAAGAA
 
. : . : . : . : . : . :
rJMFF013A05+ CTGCCTTGATGTTTCACAGGGAATGGTTTCTGTTTCTTCTTGGGAAGAGAATGATTTGTA
rJMFF012B21+ CTGCCTTGATGTTTCACAGGGAATGGTTTCTGTTTCTTCTTGGGAAGAGAATGATTTGTA
                      ____________________________________________________________
consensus CTGCCTTGATGTTTCACAGGGAATGGTTTCTGTTTCTTCTTGGGAAGAGAATGATTTGTA
 
. : . : . : . : . : . :
rJMFF013A05+ CATTGTAGATTCAATCAAACATGAA
rJMFF012B21+ CATTGTAGATTCAATCAAACATGAATGTTCAACAACAAAATGAAATCAGAATAAGAGTCA
                      ____________________________________________________________
consensus CATTGTAGATTCAATCAAACATGAATGTTCAACAACAAAATGAAATCAGAATAAGAGTCA