Contig 013643:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF010C18Sequence247019500758013643 (5)ref|XP_011079944.1|4e-81PREDICTED: V-type proton ATPase subunit F [Sesamum indicum] ref|XP_011079945.1|
JMFN037A19Sequence603013643 (5)ref|XP_011079944.1|5e-81PREDICTED: V-type proton ATPase subunit F [Sesamum indicum] ref|XP_011079945.1|
JMFN040J12Sequence479013643 (5)ref|XP_009776811.1|5e-40PREDICTED: V-type proton ATPase subunit F-like isoform X1 [Nicotiana sylvestris
JMFN040J14Sequence421013643 (5)ref|XP_009776811.1|6e-08PREDICTED: V-type proton ATPase subunit F-like isoform X1 [Nicotiana sylvestris
JMSF043E03Sequence774013643 (5)ref|XP_011079944.1|4e-80PREDICTED: V-type proton ATPase subunit F [Sesamum indicum] ref|XP_011079945.1| 552010795 (2)ref|XP_009802714.1|1e-49PREDICTED: methyltransferase-like protein 25 isoform X2 [Nicotiana sylvestris]

Alignment

This contig is upended


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JMFN040J14+                                                TCATTTTATCGCATCAGGTGAGT
JMFN040J12+                       TTCTCTACCCTTTCTGGGGTATAAATCATTTTATTGCATCCTGTGAGT
JMSF043E03+               TTTTTTTTTTCTCTACCCTTTCTGGGGTATAAATCATTTTATTGCATCCTGTGAGT
rJMFF010C18-                              CCTTTCTGGGGTATAAATCATTTTATTGCATCCTGTGAGT
                      ____________________________________________________________
consensus                 TTTTTTTTTTCTCTACCCTTTCTGGGGTATAAATCATTTTATTGCATCCTGTGAGT
 
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JMFN040J14+           GTAAGCCACAAGGAAAATGTCAAGCAGGTGGCGTGGGTACTCAGATGTCCATGCTACAAA
JMFN040J12+           GTAAACCACAAGGAAAATGTCAAGCAGGTGACCTAGGTACTCAGATCTCCATGCTACAAA
JMSF043E03+           GTAAACCACAAGGAAAATGTCAAGCAGGTGACCTAGGTACTCTGATCTCCATGCTACAAA
rJMFF010C18-          GTAAACCACAAGGAAAATGTCAAGCAGGTGACCTAGGTACTCAGATCTCCATGCTACAAA
                      ____________________________________________________________
consensus             GTAAACCACAAGGAAAATGTCAAGCAGGTGACCTAGGTACTCAGATCTCCATGCTACAAA
 
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JMFN037A19+                                                 AGTAACAACCAGCACAAGGAAT
JMFN040J14+           TTGTCATTCAGTTGGCAATACATATAGATATAGTACCAAGTATCATCCAGCTCAAGGAAT
JMFN040J12+           TTTTCAGTTTGCTGGCAAAACATATAGATATAGTAACAAGTAACAACCAGCACAAGGAAT
JMSF043E03+           TTTTCAGTTTGCTGGCAAAACATATAGATAT-------AGTAACAACCAGCACAAGGAAT
rJMFF010C18-          TTTTCAGTTTGCTGGCAAAACATATAGATATAGTAACAAGTAACAACCAGCACAAGGAAT
                      ____________________________________________________________
consensus             TTTTCAGTTTGCTGGCAAAACATATAGATATAGTAACAAGTAACAACCAGCACAAGGAAT
 
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JMFN037A19+           TATTACTCAAAAATGAATTTAAATAAATGCAGGTGCAGATGAGTAGAGTCTAAACTCTAA
JMFN040J14+           TACTACTCAAAAATGAATTGAAATAAATCCAGGTGCAGATGAGTAGAGTATAAGCTATTA
JMFN040J12+           TATTACTCAAAAATGAATTTAAATAAATGCAGGTGCAGATGAGTAGAGTCTAAACTCTAA
JMSF043E03+           TATTACTCAAAAATGAATTTAAATAAATGCAGGTGCAGATGAGTAGAGTCTAAACTCTAA
rJMFF010C18-          TATTACTCAAAAATGAATTTAAATAAATGCAGGTGCAGATGAGTAGAGTCTAAACTCTAA
                      ____________________________________________________________
consensus             TATTACTCAAAAATGAATTTAAATAAATGCAGGTGCAGATGAGTAGAGTCTAAACTCTAA
 
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JMFN037A19+           AAGGGCAGTTTA--GAAACAAGAATCATCAAGTTCAACGTCGTCCAGATGCCACAGATTC
JMFN040J14+           AGGGGGGGTTTGAGAAATCAAGAATCATCAAGTTCAGCGTTGTCCAGAAGCCACAGATCC
JMFN040J12+           AAGGGCGGTTTA--GAAACAAGAATCATCAAGTTCAGCGTCGTCCAGATGCCACAGATTC
JMSF043E03+           AAGGGCAGTTTA--GAAACAAGAATCATCAAGTTCAACGTCGTCCAGATGCCACAGATTC
rJMFF010C18-          AAGGGCGGTTTA--GAAACAAGAATCATCAAGTTCAGCGTCGTCCAGATGCCACAGATTC
                      ____________________________________________________________
consensus             AAGGGCGGTTTA--GAAACAAGAATCATCAAGTTCAGCGTCGTCCAGATGCCACAGATTC
 
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JMFN037A19+           GGTAGAGAAGAGGTACTTCACTCGTGAAAGAATAGAATCCTGTGCAGGATCGTAGGGATG
JMFN040J14+           GGTAGAGAAGAGGTACTTC                                         
JMFN040J12+           GGTAGAGAAGAGGTACTTCACTCGTGAAAGAATGGAATCCTGTGCAGGATCGTAGGGATG
JMSF043E03+           GGTAGAGAAGAGGTACTTCACTCGTGAAAGAATAGAATCCTGTGCAGGATCGTAGGGATG
rJMFF010C18-          GGTAGAGAAGAGGTACTTCACTCGTGAAAGAATGGAATCCTGTGCAGGATCGTAGGGATG
                      ____________________________________________________________
consensus             GGTAGAGAAGAGGTACTTCACTCGTGAAAGAATGGAATCCTGTGCAGGATCGTAGGGATG
 
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JMFN037A19+           GTCCTTTGAAGGAATCTCCAGGATGGCTGGTATCGGCGTGTTATAACCATCAACCAAAAA
JMFN040J12+           GTCCTTTGAAGGAATCTCCAGGATGGCTGGTATCGGCGTGTTATAACCATCAACCAAAAA
JMSF043E03+           GTCCTTTGAAGGAATCTCCAGGATGGCTGGTATCGGCGTGTTATAACCATCAACCAAAAA
rJMFF010C18-          GTCCTTTGAAGGAATCTCCAGGATGGCTGGTATCGGCGTGTTATAACCATCAACCAAAAA
                      ____________________________________________________________
consensus             GTCCTTTGAAGGAATCTCCAGGATGGCTGGTATCGGCGTGTTATAACCATCAACCAAAAA
 
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JMFN037A19+           CCTTATCATGTTCGCAACATATTGGCTGATCAACACTATTGCAATGTCCTCTCTCGTAGT
JMFN040J12+           CCTTATCATGTTTGCAACATATTGGCTGATCAACACTATTGCAATGTCCTCTCTTGTAGT
JMSF043E03+           CCTTATCATGTTCGCAACATATTGGCTGATCAACACTATTGCAATGTCCTCTCTCGTAGT
rJMFF010C18-          CCTTATCATGTTTGCAACATATTGGCTGATCAACACTATTGCAATGTCCTCTCTTGTAGT
                      ____________________________________________________________
consensus             CCTTATCATGTTTGCAACATATTGGCTGATCAACACTATTGCAATGTCCTCTCTTGTAGT
 
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JMFN037A19+           GAACTCTTTAAAAGCATCTTCAATCTGTTTCACCGTAGTTTTTGAATCCACAATAAGGTA
JMFN040J12+           GAACTCTTTAAAA                                               
JMSF043E03+           GAACTCTTTAAAAGCATCTTCAATCTGTTTCACCGTAGTTTTTGAATCCACAATAAGGTA
rJMFF010C18-          GAACTCTTTAAAAGCATCTTCAATCTGTTTCACCGTAGTTTTTGAATCCACAATAAGGTA
                      ____________________________________________________________
consensus             GAACTCTTTAAAAGCATCTTCAATCTGTTTCACCGTAGTTTTTGAATCCACAATAAGGTA
 
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JMFN037A19+           GTTTGTTTTTCTCCTCAAGTCCACGTTGCCAACTCCAGCCATTAAAAATCCAGTAACCGT
JMSF043E03+           GTTTGTTTTTCTCCTCAAGTCCACGTTGCCAACTCCAGCCATTAAAAATCCAGTAACCGT
rJMFF010C18-          GTTTGTTTTTCTCCTCAAGTCCACATTGCCAACTCCAGCCATTAAAAATCCAGTGATTGT
                      ____________________________________________________________
consensus             GTTTGTTTTTCTCCTCAAGTCCACGTTGCCAACTCCAGCCATTAAAAATCCAGTAACCGT
 
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JMFN037A19+           ATCCTCATCACCAATCATAGCAATGAGTGCTGAGTTGTTAGTGCGGATCTGAGGTCGGTT
JMSF043E03+           ATCCTCATCACCAATCATAGCAATGAGTGCTGAGTTGTTAGTGCGGATCTGAGGTCGGTT
rJMFF010C18-          ATCCTCATCACCAATCATAGCAATGAGTGCCGAGTTGCTGGTGCGGATCTGANGTCGGTT
                      ____________________________________________________________
consensus             ATCCTCATCACCAATCATAGCAATGAGTGCTGAGTTGTTAGTGCGGATCTGAGGTCGGTT
 
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JMFN037A19+           TGCCATCCT                                                   
JMSF043E03+           TGCCATCCT                                                   
rJMFF010C18-          TGCCATCCTAAACAAATTTGCTTATGCAGCTGAAAATTCACCGTTAAACAGACACCTTGT
                      ____________________________________________________________
consensus             TGCCATCCTAAACAAATTTGCTTATGCAGCTGAAAATTCACCGTTAAACAGACACCTTGT
 
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rJMFF010C18-          TCCTGGTGGTGTTTGGACTTCAATTGGTGTAAATCAGTAAATCCAGCGAAAACTCTGCAG
                      ____________________________________________________________
consensus             TCCTGGTGGTGTTTGGACTTCAATTGGTGTAAATCAGTAAATCCAGCGAAAACTCTGCAG