Contig 013641:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF009P06Sequence759013641 (2)ref|XP_009049257.1|5e-23hypothetical protein LOTGIDRAFT_113213, partial [Lottia gigantea] gb|ESP00066.1|849013641 (2)ref|XP_010690245.1|1e-31PREDICTED: proteoglycan 4-like isoform X1 [Beta vulgaris subsp. vulgaris]

Alignment

This contig is upended


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JMFF009P06-                                                                   AAAA
                      ____________________________________________________________
consensus                                                                     AAAA
 
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JMFF009P06-           ACACAATCTAATTCAAGCTGAAATAGAAGCAGAATATATATATATATATATATCTTCTTC
                      ____________________________________________________________
consensus             ACACAATCTAATTCAAGCTGAAATAGAAGCAGAATATATATATATATATATATCTTCTTC
 
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JMFF009P06-           TGAAAACGTACATACGTCTTCATCACCAAGAATGGCGGCTCATCATCCCAACCCATCCTG
                      ____________________________________________________________
consensus             TGAAAACGTACATACGTCTTCATCACCAAGAATGGCGGCTCATCATCCCAACCCATCCTG
 
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JMFF009P06-           CTTTTTCTTGCTTTTCTTGATCACTCTGTCTGCGGTGGCGATCGGCACCATTCAAACGGA
                      ____________________________________________________________
consensus             CTTTTTCTTGCTTTTCTTGATCACTCTGTCTGCGGTGGCGATCGGCACCATTCAAACGGA
 
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JMFF009P06-           GGCCAGACACCTTCTGGAGACAACCTCGCCGGAACTTCCTAAGCCTCAAATCCCAACATT
                      ____________________________________________________________
consensus             GGCCAGACACCTTCTGGAGACAACCTCGCCGGAACTTCCTAAGCCTCAAATCCCAACATT
 
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JMFF009P06-           ACCAAAGCCCGAGGTCCCAGAAATTCCAAAACCCAAGCTGCCTGAAATCCCCAAACCTGA
                      ____________________________________________________________
consensus             ACCAAAGCCCGAGGTCCCAGAAATTCCAAAACCCAAGCTGCCTGAAATCCCCAAACCTGA
 
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JMFF009P06-           GCTGCCACAGTTCCCAAAACCTCAAATACCGGCGATTCCAAAACCTCAGGTGCCGGAAAT
rJMFF009P06+                          AAACCTCAAGTGCCGGAGATTCCAAAGCCTCAGGTGCCAGAAAT
                      ____________________________________________________________
consensus             GCTGCCACAGTTCCCAAAACCTCAAGTGCCGGCGATTCCAAAGCCTCAGGTGCCGGAAAT
 
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JMFF009P06-           TCCAAAGCCCAAGATGCCTGAAATTCCCAAACCTCAAGTACCAGAGGTTCCAAAGCCTCA
rJMFF009P06+          TCCACAGCCCAAGATGCCTGAACTTCCCAAACCTCAAGTACCGGAGATTCCAAAGCCTCA
                      ____________________________________________________________
consensus             TCCACAGCCCAAGATGCCTGAACTTCCCAAACCTCAAGTACCGGAGGTTCCAAAGCCTCA
 
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JMFF009P06-           GGTCCCAGAAATTCCAAAGCCTAAGCTGCCTGAAATCTCCAAACCTCAAGTACCAGATAT
rJMFF009P06+          TATGCCAGAAATTTTAAAGCCCAAGATGCCTGAAATCCCCAAACCTCAAGTACCAGAGGT
                      ____________________________________________________________
consensus             TGTGCCAGAAATTTTAAAGCCTAAGCTGCCTGAAATCTCCAAACCTCAAGTACCAGATGT
 
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JMFF009P06-           TCCAAAGCCTCAGGTGCCTGAAATTCCAAAGCCTAAGATGCTTGAAATCCCCAAACCTCA
rJMFF009P06+          TCCAAAGCCTAAGGTGCCTGAGATTCCAAAGCCCAAGATGCCTGAAATCCCCAAACCTCA
                      ____________________________________________________________
consensus             TCCAAAGCCTCAGGTGCCTGAGATTCCAAAGCCTAAGATGCTTGAAATCCCCAAACCTCA
 
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JMFF009P06-           AGTACCAGAGGTTCCAAAGCCTCAGGTNCCGGAAACTCCAAAGCCCAAAATGCCTGAAAT
rJMFF009P06+          AGTACCAGAGGTTCCAAAGCCACATGTGCCGGAAATTCCAAAGCCTAAGATGCCTGAAAT
                      ____________________________________________________________
consensus             AGTACCAGAGGTTCCAAAGCCTCATGTGCCGGAAATTCCAAAGCCTAAGATGCCTGAAAT
 
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JMFF009P06-           CTCTAAACCTCAAGTGCCGGATATTCCAAAGCCTCAGGNGCGAGAAATTCCAAAGCCCAA
rJMFF009P06+          TTCCAAACCTCAAGTACCAGAGATTCCAAAGCCTCAGGTGCCGGAAATTCCACAGCCCAA
                      ____________________________________________________________
consensus             TTCTAAACCTCAAGTGCCGGATATTCCAAAGCCTCAGGTGCGGGAAATTCCACAGCCCAA
 
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JMFF009P06-           GATGCCTGAATTTCCCAAACCTCAAGTACCAGAGGTTCCAAAGCCTC             
rJMFF009P06+          GATGCCTGAAATCCCCAAACCTCAAGTACCGGAGATTCCAAAGCCTCAGGTGCCTGAGAT
                      ____________________________________________________________
consensus             GATGCCTGAATTTCCCAAACCTCAAGTACCGGAGGTTCCAAAGCCTCAGGTGCCTGAGAT
 
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rJMFF009P06+          TCCAAAACCGGAGCTACCAACACTCCCAAAGCCTCGGGTGCCGGAGATTCCAAAACCTGA
                      ____________________________________________________________
consensus             TCCAAAACCGGAGCTACCAACACTCCCAAAGCCTCGGGTGCCGGAGATTCCAAAACCTGA
 
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rJMFF009P06+          GCAGCCAGCATTTCCCAAGCCAGAGCTCCCAAAGAAGCCATGATTTCTTAAACGCTTGCT
                      ____________________________________________________________
consensus             GCAGCCAGCATTTCCCAAGCCAGAGCTCCCAAAGAAGCCATGATTTCTTAAACGCTTGCT
 
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rJMFF009P06+          TACCATCATGCGTTTAGATTCTCCAGATTTCTCAGAATATTTACAGTTCATGATATACTA
                      ____________________________________________________________
consensus             TACCATCATGCGTTTAGATTCTCCAGATTTCTCAGAATATTTACAGTTCATGATATACTA
 
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rJMFF009P06+          TACATTCATCTTATACTATTTTACATTTCATTTATAGTCCCATTTTGAACCAATGGCATG
                      ____________________________________________________________
consensus             TACATTCATCTTATACTATTTTACATTTCATTTATAGTCCCATTTTGAACCAATGGCATG
 
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rJMFF009P06+          TTGTTTTTTAAGAGTCGCAGTTGTACTCGTATGTCAGTAGTGAATTGAATAATATTTACG
                      ____________________________________________________________
consensus             TTGTTTTTTAAGAGTCGCAGTTGTACTCGTATGTCAGTAGTGAATTGAATAATATTTACG