clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF009M23 | Sequence | 588 | 005276 (4) | gb|AAS79591.1| | 1e-107 | putative dihydroflavonol reductase [Ipomoea trifida] dbj|BAF36324.1| hypothetica | 749 | 013640 (4) | gb|KJB09011.1| | 5e-100 | hypothetical protein B456_001G118900 [Gossypium raimondii] |
JMSF024C14 | Sequence | 686 | 005276 (4) | gb|AAS79591.1| | 7e-134 | putative dihydroflavonol reductase [Ipomoea trifida] dbj|BAF36324.1| hypothetica | 738 | 013640 (4) | gb|KJB09011.1| | 4e-108 | hypothetical protein B456_001G118900 [Gossypium raimondii] |
JMSF037A11 | Sequence | 666 | 005276 (4) | gb|AAS79591.1| | 5e-109 | putative dihydroflavonol reductase [Ipomoea trifida] dbj|BAF36324.1| hypothetica | 727 | 013640 (4) | gb|KJB09011.1| | 7e-105 | hypothetical protein B456_001G118900 [Gossypium raimondii] |
JMSF045K20 | Sequence | 788 | 005276 (4) | gb|AAS79591.1| | 3e-134 | putative dihydroflavonol reductase [Ipomoea trifida] dbj|BAF36324.1| hypothetica | 739 | 013640 (4) | gb|KJB09011.1| | 8e-93 | hypothetical protein B456_001G118900 [Gossypium raimondii] |
This contig is upended
. : . : . : . : . : . :
rJMSF024C14+ TGGTATTGATGGTCCCAGTGAGGGTGTTCCAAGAGTTTTGGCATGCTTCAGTAAT-
rJMSF045K20+ CCAAGAGTTTTGGCATGCTTCAGTAATA
rJMSF037A11+ GTCCCAGTGAGGGTGTTCCAAGAGTTTTGGCATGCTTCAGTAAT-
rJMFF009M23+ TTCCAAGAGTTTTGGCATGCTTCAGTAAT-
____________________________________________________________
consensus TGGTATTGATGGTCCCAGTGAGGGTGTTCCAAGAGTTTTGGCATGCTTCAGTAAT-
. : . : . : . : . : . :
rJMSF024C14+ AACCTTTTGAGACGTGAACCATTGAAGCTTGTTGATGGAGGCCAATCTCAGAGAACCTTT
rJMSF045K20+ ACCCTTTTGAGACGTGAACCATTGAAGCTTGTTGATGGAGGCCAATCTCAGAGAACCTTT
rJMSF037A11+ AACCTTTTGAGACGTGAACCATTGAAGCTTGTTGATGGAGGCCAATCTCAGAGAACCTTT
rJMFF009M23+ ACCCTTTTGAGACGTGAACCATTGAAGCTTGTTGATGGAGGCCAATCTCAGAGAACCTTT
____________________________________________________________
consensus ACCCTTTTGAGACGTGAACCATTGAAGCTTGTTGATGGAGGCCAATCTCAGAGAACCTTT
. : . : . : . : . : . :
rJMSF024C14+ GTATATATCAAGGATGCCATTGAAGCTGTTGTTTTGATGATTGAAAATCCTTCAAGGGCA
rJMSF045K20+ GTATATATCAAGGATGCCATTGAAGCTGTTGTTTTGATGATTGAAAATCCTTCAAGGGCA
rJMSF037A11+ GTATATATCAAGGATGCCATTGAAGCTGTTGTTTTGATGATTGAAAATCCTTCAAGGGCA
rJMFF009M23+ GTATATATCAAGGATGCCATTGAAGCTGTTGTTTTGATGATTGAAAATCCTTCAAGGGCA
____________________________________________________________
consensus GTATATATCAAGGATGCCATTGAAGCTGTTGTTTTGATGATTGAAAATCCTTCAAGGGCA
. : . : . : . : . : . :
rJMSF024C14+ AACGGCCATATTTTTAATGTGGGCAATCCTAACAATGAAGTTACTGTGAGGCAGCTTGCT
rJMSF045K20+ AACGGCCATATTTTTAATGTGGGCAATCCTAACAATGAAGTTACTGTGAGGCAGCTTGCT
rJMSF037A11+ AACGGCCATATTTTTAATGTGGGCAATCCTAACAATGAAGTTACTGTGAGGCAGCTTGCT
rJMFF009M23+ AACGGCCATATTTTTAATGTGGGCAATCCTAACAATGAAGTTACTGTGAGGCAGCTTGCT
____________________________________________________________
consensus AACGGCCATATTTTTAATGTGGGCAATCCTAACAATGAAGTTACTGTGAGGCAGCTTGCT
. : . : . : . : . : . :
rJMSF024C14+ GAAATGATGACGAAGGTATATTCGAAGGTCAGTGGGGAATCTGCAATTGACAGTCCAACC
rJMSF045K20+ GAAATGATGACGAAGGTATATTCGAAGGTCAGTGGGGAATCTGCAATTGACAGTCCAACC
rJMSF037A11+ GAAATGATGACGAAGGTATATTCGAAGGTCAGTGGGGAATCTGCAATTGACAGTCCAACC
rJMFF009M23+ GAAATGATGACGAAGGTATATTCGAAGGTCAGTGGGGAATCTGCAATTGACAGTCCAACC
____________________________________________________________
consensus GAAATGATGACGAAGGTATATTCGAAGGTCAGTGGGGAATCTGCAATTGACAGTCCAACC
. : . : . : . : . : . :
rJMSF024C14+ TTAGATGTAAGCTCAAAAGAATTCTATGGTGAGGGGTATGATGATAGTGACAAGAGAATT
rJMSF045K20+ TTAGATGTAAGCTCAAAAGAATTCTATGGTGAGGGGTATGATGATAGTGACAAGAGAATT
rJMSF037A11+ TTAGATGTAAGCTCAAAAGAATTCTATGGTGAGGGGTATGATGATAGTGACAAGAGAATT
rJMFF009M23+ TTAGATGTAAGCTCAAAAGAATTCTATGGTGAGGGGTATGATGATAGTGACAAGAGAATT
____________________________________________________________
consensus TTAGATGTAAGCTCAAAAGAATTCTATGGTGAGGGGTATGATGATAGTGACAAGAGAATT
. : . : . : . : . : . :
rJMSF024C14+ CCAGACATGACAATAATCAACAAGCAACTCGGCTGGAATCCTAAGACATCGTTATGGGAC
rJMSF045K20+ CCAGACATGACAATAATCAACAAGCAACTCGGCTGGAATCCTAAGACATCGTTATGGGAC
rJMSF037A11+ CCAGACATGACAATAATCAACAAGCAACTCGGCTGGAATCCTAAGACATCGTTATGGGAC
rJMFF009M23+ CCAGACATGACAATAATCAACAAGCAACTCGGCTGGAATCCTAAGACATCGTTATGGGAC
____________________________________________________________
consensus CCAGACATGACAATAATCAACAAGCAACTCGGCTGGAATCCTAAGACATCGTTATGGGAC
. : . : . : . : . : . :
rJMSF024C14+ TTGCTTGAATCCACACTCACATACCAACATAGAACATATGCTGAGGCTATCAAGAAGGCA
rJMSF045K20+ TTGCTTGAATCCACACTCACATACCAACATAGAACATATGCTGAGGCTATCAAGAAGGCA
rJMSF037A11+ TTGCTTGAATCCACACTCACATACCAACATAGAACATATGCTGAGGCTATCAAGAAGGCA
rJMFF009M23+ TTGCTTGAATCCACACTCACATACCAACATAGAACATATGCTGAGGCTATCAAGAAGGCA
____________________________________________________________
consensus TTGCTTGAATCCACACTCACATACCAACATAGAACATATGCTGAGGCTATCAAGAAGGCA
. : . : . : . : . : . :
rJMSF024C14+ ATTTCAAAGCCAACTGCAAGTTGAAGGAAAAACAGGGCGGATTTAAAGATGTTAAGTAAA
rJMSF045K20+ ATTTCAAAGCCAACTGCAAGTTGAAGGAAAAACAGGGCGGATTTAAAGATGTTAAGTAAA
rJMSF037A11+ ATTTCAAAGCCAACTGCAAGTTGAAGGAAAAACAGGGCGGATTTAAAGATGTTAAGTAAA
rJMFF009M23+ ATTTCAAAGCCAACTGCAAGTTGAAGGAAAAACAGGGCGGATTTAAAGATGTTAAGTAAA
____________________________________________________________
consensus ATTTCAAAGCCAACTGCAAGTTGAAGGAAAAACAGGGCGGATTTAAAGATGTTAAGTAAA
. : . : . : . : . : . :
rJMSF024C14+ ACAATGTTGTCCAGATGATACGGAGTGGAGTAGAATTTTTTCTTGTGTTTTTTCCAATCG
rJMSF045K20+ ACAATGTTGTCCAGATGATACGGAGTGGAGTAGAATTTTTTCTTGTGTTTTTTCCAATCG
rJMSF037A11+ ACAATGTTGTCCAGATGATACGGAGTGGAGTAGAATTTTTTCTTGTGTTTTTTCCAATCG
rJMFF009M23+ ACAATGTTGTCCAGATGATACGGAGTGGAGTAGAATTTTTTCTTGTGTTTTTTCCAATCG
____________________________________________________________
consensus ACAATGTTGTCCAGATGATACGGAGTGGAGTAGAATTTTTTCTTGTGTTTTTTCCAATCG
. : . : . : . : . : . :
rJMSF024C14+ TACAATAGTAAGCAACCATGTATCAATGTCTTTAGACAGTAGATTTAGTTCAGAATTGTG
rJMSF045K20+ TACAATAGTAAGCAACCATGTATCAATGTCTTTAGACAGTAGATTTAGTTCAGAATTGTG
rJMSF037A11+ TACAATAGTAAGCAACCATGTATCAATGTCTTTAGACAGTAGATTTAGTTCAGAATTGTG
rJMFF009M23+ TACAATAGTAAGCAACCATGTATCAATGTCTTTAGACAGTAGATTTAGTTCAGAATTGTG
____________________________________________________________
consensus TACAATAGTAAGCAACCATGTATCAATGTCTTTAGACAGTAGATTTAGTTCAGAATTGTG
. : . : . : . : . : . :
rJMSF024C14+ GTGTAGTATGCTACTAGAGCTTTAGCTACTTTTTCAGGGCATCCTAGTACTGAAAGCATA
rJMSF045K20+ GTGTAGTATGCTACTAGAGCTTTAGCTACTTTTTCAGGGCATCCTAGTACTGAAAGCATA
rJMSF037A11+ GTGTAGTATGCTACTAGAGCTTTAGCTACTTTTTCAGGGCATCCTAGTACTGAAAGCATA
rJMFF009M23+ GTGTAGTATGCTACTAGAGCTTTAGCTACTTTTTCAGGGCATCCTAGTACTGAAAGCATA
____________________________________________________________
consensus GTGTAGTATGCTACTAGAGCTTTAGCTACTTTTTCAGGGCATCCTAGTACTGAAAGCATA
. : . : . : . : . : . :
rJMSF024C14+ ATGTTCTTTTGTTGTCATAATAT
rJMSF045K20+ ATGTTCTTTTGTTGTCATAATAT
rJMSF037A11+ ATGTTCTTTTGTTGTCATAATAT
rJMFF009M23+ ATGTTCTTTTGTTGTCATAATATTGTCAATGTCAATGCTGCTGCTCATACGAGGAGGAGC
____________________________________________________________
consensus ATGTTCTTTTGTTGTCATAATATTGTCAATGTCAATGCTGCTGCTCATACGAGGAGGAGC