Contig 013634:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF008N06Sequence730013634 (7)gb|AAC49564.1|5e-61lectin [Calystegia sepium]
JMFF023J16Sequence467013634 (7)gb|AAC49564.1|1e-47lectin [Calystegia sepium]717013634 (7)gb|AAC49564.1|4e-61lectin [Calystegia sepium]
JMFN010A20Sequence619013634 (7)gb|AAG10403.1|AF233284_12e-73mannose-binding lectin [Convolvulus arvensis]
JMFN036A21Sequence554013634 (7)gb|AAG10403.1|AF233284_11e-72mannose-binding lectin [Convolvulus arvensis]
JMSF015O02Sequence381013634 (7)gb|AAC49564.1|8e-38lectin [Calystegia sepium]718013634 (7)gb|AAC49564.1|1e-61lectin [Calystegia sepium]

Alignment

This contig is upended


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rJMSF015O02-                                                        ATTTTTTTCAATAA
                      ____________________________________________________________
consensus                                                           ATTTTTTTCAATAA
 
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rJMSF015O02-          AAATATTGATTGAAGACACATATATTATTAAAGAGCAAAGTATAAAAACAACTTTATTTA
rJMFF023J16-                                                            ACTTTATTTA
rJMFF008N06-                                                            ACTTTATTTA
                      ____________________________________________________________
consensus             AAATATTGATTGAAGACACATATATTATTAAAGAGCAAAGTATAAAAACAACTTTATTTA
 
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rJMSF015O02-          TTAATATGCTCATACATGAGAGCACATTTGACAAACATAAAACAAGCAAAGCATAAATAC
rJMFF023J16-          TTAATATGCTCATACATGAGAGCACATTTGACAAACATAAAACAAGCAAAGCATAAATAC
rJMFF008N06-          TTAATATGCTCATACATGAGAGCACATTTGACAAACATAAAACAAGCAAAGCATAAATAC
                      ____________________________________________________________
consensus             TTAATATGCTCATACATGAGAGCACATTTGACAAACATAAAACAAGCAAAGCATAAATAC
 
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rJMSF015O02-          AACATTATTCAAACCATTTGGAACTTATTCAACAAACAACACACATAGACATGTTCCAAT
rJMFF023J16-          AACATTATTCAAACCATTTGGAACTTATTCAACAAACAACACACATAGACATGTTCCAAT
JMFN036A21+                 ATTCATACCATTTGGAACTTATTCAACAAACAACACACATAGACATGTTCCAAT
JMFN010A20+             CATTATTCATACCATTTGGAACTTATTCAACAAACAACACACATAGACATGTTCCAAT
rJMFF008N06-          AACATTATTCANACCATTTGGAACTTATTCAACAAACAACACACATAGACATGTTCCAAT
                      ____________________________________________________________
consensus             AACATTATTCATACCATTTGGAACTTATTCAACAAACAACACACATAGACATGTTCCAAT
 
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rJMSF015O02-          GGAGCATTACTTAAGCTTGAGAGTGCCGATAGATCGATAATATAATCACTTATCAGAATT
rJMFF023J16-          GGAGCATTACTTAAGCTTGAGAGTGCCGATAGATCGATAATATAATCACTTATCAGAATT
JMFN036A21+           GGAGCAATACTTCAGCTTGAGAGTGACAATAGATCAATAATATAATCACTTATTAGAATT
JMFN010A20+           GGAGCAATACTTCAGCTTGAGAGTGACAATAGATCAATAATATAATCACTTATTAGAATT
rJMFF008N06-          GGAGCATTACTTAAGCTTGAGAGTGCCGATAGATCGATAATATAATCACTTATCAGAATT
                      ____________________________________________________________
consensus             GGAGCATTACTTAAGCTTGAGAGTGCCGATAGATCGATAATATAATCACTTATCAGAATT
 
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rJMSF015O02-          ATAAGTACCAATAGCATCAATATAGAATCCAGAGCGACCAAGGAATCCAACAATCTTATT
JMFF023J16+                                                                      T
rJMFF023J16-          ATAAGTACCAATAGCATCAATATAGAATCCAGAGCGACCAAGGAATCCAACAATCTTATT
JMFN036A21+           ATAAGTACCAATAGCATCAATATAGAATCCAGAGCGACCAAGGAATCCAACAATCTTATT
JMFN010A20+           ATAAGTACCAATAGCATCAATATAGAATCCAGAGCGACCAAGGAATCCAACAATCTTATT
rJMFF008N06-          ATAAGTACCAATAGCATCAATATAGAATCCAGAGCGACCAAGGAATCCAACAATCTTATT
                      ____________________________________________________________
consensus             ATAAGTACCAATAGCATCAATATAGAATCCAGAGCGACCAAGGAATCCAACAATCTTATT
 
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rJMSF015O02-          GGGAACGACATGCACGGGATGGAATGTCTCTCCATCAGTGTGGCCAAAAGGCCCGTAGTC
JMFF023J16+           GGGAACGACATGCACGGGATGGAATGTCTCTACATCAGTGTGGCCAAAAGGCCCGTAGTC
rJMFF023J16-          GGGAACGACATGCACGGGATGGAATGTCTCTACATCAGTGTGGCCAAAAGGCCCGTAGTC
JMFN036A21+           GGGAACGACACGCACAGGACTGAACGGCTCTCCAACATTGGGGCCAAAAGGCCCGTAGTC
JMFN010A20+           GGGAACGACACGCACAGGACTGAACGGCTCTCCAACATTGGGGCCAAAAGGCCCGTAGTC
rJMFF008N06-          GGGAACGACATGCACGGGATGGAATGTCTCTACATCAGTGTGGCCAAAAGGCCCGTAGTC
                      ____________________________________________________________
consensus             GGGAACGACATGCACGGGATGGAATGTCTCTCCATCAGTGTGGCCAAAAGGCCCGTAGTC
 
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rJMSF015O02-          TTTCAAATTGGTAGTGAACTTTATTGAACGTAGGACTTTGACGTCCAAGTGAATTCCAAA
JMFF023J16+           TTTCAAATTGGTAGTGAACTTTATTGAACGTAGGACTTTGACGTCCAAGTGAATTCCAAA
JMSF015O02+                                     AACGTAGGACTTTGACGTCCAAGTGAATTCCAAA
rJMFF023J16-          TTTCAAATTGGTAGTGAACTTTATTGAACGTAGGACTTTGACGTCCAAGTGAATTCCAAA
JMFN036A21+           TTTCAAATTGGTAGTGAACTTTATTGAACGTAAGACATTGTTATCCAGGTAAATTCCAAA
JMFN010A20+           TTTCAAATTGGTAGTGAACTTTATTGAACGTAAGACATTGTTATCCAGGTAAATTCCAAA
rJMFF008N06-          TTTCAAATTGGTAGTGAACTTTATTGAACGTAGGACTTTGACGTCCAAGTGAATTCCAAA
                      ____________________________________________________________
consensus             TTTCAAATTGGTAGTGAACTTTATTGAACGTAGGACTTTGACGTCCAAGTGAATTCCAAA
 
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rJMSF015O02-          TGTTCCACTTATATGTTCCAAGCGTTCATCCGCGTTATCAATATTCACCATGTCAGTCTT
JMFF023J16+           TGTTCCACTTATATGTTCCAAGTGTTCATCCGCGTTATCAATATTCACCATGTCAGTCTT
JMSF015O02+           TGTTCCACTTATATGTTCCAAGCGTTCATCCGCGTTATCAATATTCACCATGTCAGTCTT
rJMFF023J16-          TGTTCCACTTATATGTTCCAAGTGTTCATCCGCGTTATCAATATTCACCATGTCAGTCTT
JMFN036A21+           CGTTCCACTTATATCAACTAAGTATTCATCCGCGTTATCAATATTCACCGTGTCAGTGTT
JMFN010A20+           CGTTCCACTTATATCAACTAAGTATTCATCCGCGTTATCAATATTCACCGTGTCAGTGTT
rJMFF008N06-          TGTTCCACTTATATGTTCCAAGTGTTCATCCGCGTTATCAATATTCACCATGTCAGTCTT
                      ____________________________________________________________
consensus             TGTTCCACTTATATGTTCCAAGTGTTCATCCGCGTTATCAATATTCACCATGTCAGTCTT
 
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rJMSF015O02-          AATGATGCGTTCTGGTCCTGCTCCTCCTACTTTGATTGTATCCTTTGAACCATCATCTCT
JMFF023J16+           AATGATGCGTTCTGGTCCTGCTCCTCCTACTTTGATTGTATCCTTTGAACCATCATCTCT
JMSF015O02+           AATGATGCGTTCTGGTCCTGCTCCTCCTACTTTGATTGTATCCTTTGAACCATCATCTCT
rJMFF023J16-          AATGATGCGTTCTGGTCCTGCTCCTCCTACTTTGATTGTATCCTTTGAACCATCATCTCT
JMFN036A21+           AACGATGCGGTCTGGTCCTGCTCCTCCTACTGTGATTGTATCCTTTGAACCATCATCTTT
JMFN010A20+           AACGATGCGGTCTGGTCCTGCTCCTCCTACTGTGATTGTATCCTTTGAACCATCATCTTT
rJMFF008N06-          AATGATGCGTTCTGGTCCTGCTCCTCCTACTTTGATTGTATCCTTTGAACCATCATCTCT
                      ____________________________________________________________
consensus             AATGATGCGTTCTGGTCCTGCTCCTCCTACTTTGATTGTATCCTTTGAACCATCATCTCT
 
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rJMSF015O02-          AGTGCTAGAAAAAGTTAGGGCAATGGGGTTGTCACCAGAGTCTCCAGAATAATGAATGAG
JMFF023J16+           AGTGCTAGAAAAAGTTAGGGCAATGGGGTTGTCACCAGAGTCTCCAGAATAATGAATGAG
JMSF015O02+           AGTGCTAGAAAAAGTTAGGGCAATGGGGTTGTCACCAGAGTCTCCAGAATAATGAATGAG
rJMFF023J16-          AGTGCTAGAAAAAGTTAGGGCAATGGGGTTGTCACCAGAGTCTCCAGAATAATGAATGAG
JMFN036A21+           AGTGCTAGAAAAAGTTAGGGCAATGGGGTTGTTACCAGAG------GCATAGTGAATGAC
JMFN010A20+           AGTGCTAGAAAAAGTTAGGGCAATGGGGTTGTTACCAGAG------GCATAGTGAATGAC
rJMFF008N06-          AGTGCTAGAAAAAGTTAGGGCAATGGGGTTGTCACCAGAGTCTCCAGAATAATGAATGAG
                      ____________________________________________________________
consensus             AGTGCTAGAAAAAGTTAGGGCAATGGGGTTGTCACCAGAGTCTCCAGAATAATGAATGAG
 
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rJMSF015O02-          TATCTGGTTTATCTTGTTTACAGGTCGGAAACTCCAAAAATCTCCACCGCTGAATCCAAA
JMFF023J16+           TATCTGGTTTATCTTGTTTACAGGTCGGAAACTCCAAAAATCTCCACCGCTGAATCCAAA
JMSF015O02+           TATCTGGTTTATCTTGTTTACAGGTCGGAAACTCCAAAAATCTCCACCGCTGAATCCAAA
rJMFF023J16-          TATCTGGTTTATCTTGTTTACAGGTCGGAAACTCCAAAAATCTCCACCGCTGAATCCAAA
JMFN036A21+           TATCTGGTTTATCTTGTTTACTGGTCGGAAACTCCAAAAATCTCCACCGCTGAATCCAAA
JMFN010A20+           TATCTGGTTTATCTTGTTTACTGGTCGGAAACTCCAAAAATCTCCACCGCTGAATCCAAA
rJMFF008N06-          TATCTGGTTTATCTTGTTTACAGGTCGGAAACTCCAAAAATCTCCACCGCTGAATCCAAA
                      ____________________________________________________________
consensus             TATCTGGTTTATCTTGTTTACAGGTCGGAAACTCCAAAAATCTCCACCGCTGAATCCAAA
 
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rJMSF015O02-          TGGTCCAGCTATCTTATCCATAGGAATTGCAGCTGCCATGATTT                
JMFF023J16+           TGGTCCAGCTATCTTATCCATAGGAATTGCAGCTGCCATGATTTCTTGGATGATAGTTCA
JMSF015O02+           TGGTCCAGCTATCTTATCCATAGGAATTGCAGCTGCCATGATTTCTTGGATGATAGTTCA
rJMFF023J16-          TGGTCCAGCTATCTTATCCATAGGAATTGCAGCTGCCATGATTTCTTGGATGATAGTTCA
JMFN036A21+           CGGTCCAGCTATCGTGTCCATAGGAA                                  
JMFN010A20+           CGGTCCAGCTATCGTGTCCATAGGAA---CTGCGGCCATGATTTCTTGGATGATAATTGA
rJMFF008N06-          TGGTCCAGCTATCTTATCCATAGGAATTGCAGCTGCCATGATTTCTTGGATGATAGTTCA
                      ____________________________________________________________
consensus             TGGTCCAGCTATCTTATCCATAGGAATTGCAGCTGCCATGATTTCTTGGATGATAGTTCA
 
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JMFF023J16+           GAAGGAAAGCAAAAGGCAGATTGAAAATGAGCAATTTTG                     
JMSF015O02+           GAAGGAAAGCAAAAGGCAGATTGAAAATGAGCAATTTTG                     
rJMFF023J16-          GAAGGAAAGCAAAAGGCAGATTGAAAATGAGCAATTTTG                     
JMFN010A20+           GAAGGAAAGCAAAAGGCAGATTGAAAATGA                              
rJMFF008N06-          GAAGGAAAGCAAAAGGCAGATTGAAAATGAGCAATTTTGGATTTGGTCGGTTCTCGACGA
                      ____________________________________________________________
consensus             GAAGGAAAGCAAAAGGCAGATTGAAAATGAGCAATTTTGGATTTGGTCGGTTCTCGACGA