Contig 013626:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007N20Sequence502020563ref|XP_006341564.1|3e-72PREDICTED: 66 kDa stress protein-like [Solanum tuberosum]681013626 (2)emb|CDO98377.1|2e-61unnamed protein product [Coffea canephora]
JMFN038F24Sequence509013626 (2)ref|XP_006490743.1|7e-18PREDICTED: 66 kDa stress protein-like [Citrus sinensis] gb|KDO62888.1| hypotheti

Alignment

This contig is upended


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JMFN038F24+                      GTAAAAAACAAACCTTTTTAAGGGAACATAAAAAATGTCTACATGAAAA
rJMFF007N20-                                                 TAAAAAATGTCTACATGAAAA
                      ____________________________________________________________
consensus                        GTAAAAAACAAACCTTTTTAAGGGAACATAAAAAATGTCTACATGAAAA
 
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JMFN038F24+           CTATACATAGAAAGCAAATGTTGAAACATAATTTCCAGTGGATTGACAGAAATTATAACG
rJMFF007N20-          CTATACATAGAAAGCAAATGTTGAAACATAATTTCCAGTGGATTGACAGAAATTATAACG
                      ____________________________________________________________
consensus             CTATACATAGAAAGCAAATGTTGAAACATAATTTCCAGTGGATTGACAGAAATTATAACG
 
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JMFN038F24+           TTTCCTGTGATGCCACAGGACAGCTAACTTCAAATACCCCCAACATCTCCAGCAACACAT
rJMFF007N20-          TTTCCTGTGATGCCACAGGACAGCTAACTTCAAATACCCCCAACATCTCCAGCAACACAT
                      ____________________________________________________________
consensus             TTTCCTGTGATGCCACAGGACAGCTAACTTCAAATACCCCCAACATCTCCAGCAACACAT
 
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JMFN038F24+           TAATTCACTACTTCATTGATCAACAAAAAAACAAAAACAAAAAAAACAAAAAACAAAAAA
rJMFF007N20-          TAATTCACTACTTCATTGATCAACAAAAAAACAAAAACAAAAAAAACAAAAAACAAAAAA
                      ____________________________________________________________
consensus             TAATTCACTACTTCATTGATCAACAAAAAAACAAAAACAAAAAAAACAAAAAACAAAAAA
 
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JMFN038F24+           CAAAAAACAAAAAAACTAGGATGTGTTCTTGGGACCAACCGGTTTCATGCTCACCATTGA
rJMFF007N20-          CAAAAAACAAAAAAACTAGGATGTGTTCTTGGGACCAACCGGTTTCATGCTCACCATTGA
                      ____________________________________________________________
consensus             CAAAAAACAAAAAAACTAGGATGTGTTCTTGGGACCAACCGGTTTCATGCTCACCATTGA
 
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JMFN038F24+           TCACATCAGAAACAACAAAAACAAAAGTAATGTGCAAAGAACTGCACTTATCACCTGAGA
rJMFF007N20-          TCACATCAGAAACAACAAAAACAAAAGTAATGTGCAAAGAACTGCACTTATCACCTGAGA
                      ____________________________________________________________
consensus             TCACATCAGAAACAACAAAAACAAAAGTAATGTGCAAAGAACTGCACTTATCACCTGAGA
 
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JMFN038F24+           AATCTTGATTATGGCGGGGTTAGAGTCCAAACGCGAACACAAGCATCCTCCCCAGAGCTC
rJMFF007N20-          AATCTTGATTATGGCGGGGTTAGAGTCCAAACGCGAACACAAGCATCCTCCCCAGAGCTC
                      ____________________________________________________________
consensus             AATCTTGATTATGGCGGGGTTAGAGTCCAAACGCGAACACAAGCATCCTCCCCAGAGCTC
 
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JMFN038F24+           ACAACACTATGCTCATCAGTAAAAGCAAGTCCATACACCCCACCTAGATGAGCTCCCTTG
rJMFF007N20-          ACAACACTATGCTCATCAGTAAAAGCAAGTCCATACACCCCACCTAGATGAGCTCCCTTG
                      ____________________________________________________________
consensus             ACAACACTATGCTCATCAGTAAAAGCAAGTCCATACACCCCACCTAGATGAGCTCCCTTG
 
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JMFN038F24+           ATAGTAGTTCGATCAGACGGGGGCTTGCTCAATTCGTAAA                    
rJMFF007N20-          ATAGTAGTTCGATCAGACGGGGGCTTGCTCAATTCGTAAACGATGACATGTGTGTCTAGT
                      ____________________________________________________________
consensus             ATAGTAGTTCGATCAGACGGGGGCTTGCTCAATTCGTAAACGATGACATGTGTGTCTAGT
 
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rJMFF007N20-          CCGCCAGTTGCTACCTTAGTGTTGTCAGGGGACCATGCCAAGCAGTTTATTCTTGCAGTG
                      ____________________________________________________________
consensus             CCGCCAGTTGCTACCTTAGTGTTGTCAGGGGACCATGCCAAGCAGTTTATTCTTGCAGTG
 
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rJMFF007N20-          TGGTATAACATATCCTTAAGCTTCATCTCTCGAGTGGCACGATCCCAGACAACAGCCTCT
                      ____________________________________________________________
consensus             TGGTATAACATATCCTTAAGCTTCATCTCTCGAGTGGCACGATCCCAGACAACAGCCTCT
 
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rJMFF007N20-          CGGTTTGCATCTGCTGAGGCGAACATGGAAACATCTGGGGAGTACCGGATCACAGTAATA
                      ____________________________________________________________
consensus             CGGTTTGCATCTGCTGAGGCGAACATGGAAACATCTGGGGAGTACCGGATCACAGTAATA