Contig 013622:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF007B11Sequence548005900 (3)ref|XP_009617988.1|81.6PREDICTED: uncharacterized protein LOC104110244 [Nicotiana tomentosiformis]814013622 (2)ref|XP_006341344.1|287PREDICTED: uncharacterized protein LOC102594169 [Solanum tuberosum]
JMSF047L22Sequence647005900 (3)ref|XP_009617988.1|130PREDICTED: uncharacterized protein LOC104110244 [Nicotiana tomentosiformis]709013622 (2)ref|XP_006341344.1|297PREDICTED: uncharacterized protein LOC102594169 [Solanum tuberosum]

Alignment

This contig is upended


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rJMFF007B11+                                    TATATGCTGCTTTTCATGATGAGGAATGGGGAGT
                      ____________________________________________________________
consensus                                       TATATGCTGCTTTTCATGATGAGGAATGGGGAGT
 
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rJMSF047L22+              GTCCATGATGATAGGAATCTTTTCGAACTACTTAGTTTATCCACAGCATTAGCAGA
rJMFF007B11+          TCCTGTCCATGATGATAGGAATCTTTTCGAACTACTTAGTTTATCCACAGCATTAGCAGA
                      ____________________________________________________________
consensus             TCCTGTCCATGATGATAGGAATCTTTTCGAACTACTTAGTTTATCCACAGCATTAGCAGA
 
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rJMSF047L22+          ACTTTCATGG-CCGACCATTCTGAGTAGACGACAGGCATTCAAAGAAGTGTTCCAAAATT
rJMFF007B11+          ACTTTCATGGCCCGACCATTCTGAGTAGACGACAGGCATTCAAAGAAGTGTTCCAAAATT
                      ____________________________________________________________
consensus             ACTTTCATGGCCCGACCATTCTGAGTAGACGACAGGCATTCAAAGAAGTGTTCCAAAATT
 
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rJMSF047L22+          TTGATCCTGTTGCTGTCTCAAAACTGAATGAAAAGAAGATAACGGTTCCAGGAAATCCCG
rJMFF007B11+          TTGATCCTGTTGCTGTCTCAAAACTGAATGAAAAGAAGATAACGGTTCCAGGAAATCCCG
                      ____________________________________________________________
consensus             TTGATCCTGTTGCTGTCTCAAAACTGAATGAAAAGAAGATAACGGTTCCAGGAAATCCCG
 
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rJMSF047L22+          CCAGCTCTCTTTTGTCAGAGTTAAAGCTGCGGGCAATTATTGAAAATGCCCGCCATGTAT
rJMFF007B11+          CCAGCTCTCTTTTGTCAGAGTTAAAGCTGCGGGCAATTATTGAAAATGCCCGCCATGTAT
                      ____________________________________________________________
consensus             CCAGCTCTCTTTTGTCAGAGTTAAAGCTGCGGGCAATTATTGAAAATGCCCGCCATGTAT
 
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rJMSF047L22+          GTAAGATAATTGATGAGATTGGGTCCTTCGACAAATATGTTTGGGGTTTTGTAAACCACA
rJMFF007B11+          GTAAGATAATTGATGAGATTGGGTCCTTCGACAAACATGTTTGGGGTTTTGTAAACCACA
                      ____________________________________________________________
consensus             GTAAGATAATTGATGAGATTGGGTCCTTCGACAAATATGTTTGGGGTTTTGTAAACCACA
 
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rJMSF047L22+          GGCCTATAGTTGGTCAGTTCCGATACCCAAGACAAGTTCCAATCAAGACATCAAAAGCTG
rJMFF007B11+          GGCCTATAGTTGGTCAGTTCCGATACCCAAGACAAGTTCCAATCAAGACATCAAAAGCTG
                      ____________________________________________________________
consensus             GGCCTATAGTTGGTCAGTTCCGATACCCAAGACAAGTTCCAATCAAGACATCAAAAGCTG
 
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rJMSF047L22+          AAGCGATAAGCAAAGACCTAGTCAGAAGAGGTTTCCGAGGAGTAGGACCCACGGTCATTT
rJMFF007B11+          AAGCGATAAGCAAAGACCTAGTCAGAAGAGGTTTCCGAGGAGTAGGACCCACGGTCATTT
                      ____________________________________________________________
consensus             AAGCGATAAGCAAAGACCTAGTCAGAAGAGGTTTCCGAGGAGTAGGACCCACGGTCATTT
 
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rJMSF047L22+          ACTCCTTCATGCAGGTTTCTGGAATCACAAATGACCATCTCATCAGTTGCTTTAGATTCC
rJMFF007B11+          ACTCCTTCATGCAGGTTTCTGGAATCACAAATGACCATCTCATCAGTTGCTTTAGATTCC
                      ____________________________________________________________
consensus             ACTCCTTCATGCAGGTTTCTGGAATCACAAATGACCATCTCATCAGTTGCTTTAGATTCC
 
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rJMSF047L22+          A                                                           
rJMFF007B11+          ATGAATGTATGGCGTGGGGCAATGCAAGGAACAAAGGCGATAGCCTCAGTGCTGCCAAGC
                      ____________________________________________________________
consensus             ATGAATGTATGGCGTGGGGCAATGCAAGGAACAAAGGCGATAGCCTCAGTGCTGCCAAGC
 
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rJMFF007B11+          TCAAGGTAAAACAACCTGAGGATGACGACGCTGAACTTGGACTAGTAAGAGCTATTGACA
                      ____________________________________________________________
consensus             TCAAGGTAAAACAACCTGAGGATGACGACGCTGAACTTGGACTAGTAAGAGCTATTGACA
 
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rJMFF007B11+          ACTCGAGCTTATCCACATAGATTTCTTTTTTATTCCATGCATCGAAATATATACATACAT
                      ____________________________________________________________
consensus             ACTCGAGCTTATCCACATAGATTTCTTTTTTATTCCATGCATCGAAATATATACATACAT
 
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rJMFF007B11+          GAGTAGTTTCCTGCTGTCCTGCCCTTCTGTACTATAATATTCCTTGTACAAATCACTGTG
                      ____________________________________________________________
consensus             GAGTAGTTTCCTGCTGTCCTGCCCTTCTGTACTATAATATTCCTTGTACAAATCACTGTG
 
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rJMFF007B11+          AACCTATAATGTTCATTGCTTTTTAGATCATAAACCGATTTGCAAGTTAAGAAGTCATGA
                      ____________________________________________________________
consensus             AACCTATAATGTTCATTGCTTTTTAGATCATAAACCGATTTGCAAGTTAAGAAGTCATGA