Contig 013621:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF006K12-                                        ACCTAAATAATATCATCAGATCTAATTCACC
                      ____________________________________________________________
consensus                                          ACCTAAATAATATCATCAGATCTAATTCACC
 
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JMFF006K12-           CCCACCCCACCCTTTTAAATCTCTCATTTACATCTTCGATCTTCACCAAAAACTGTACAA
                      ____________________________________________________________
consensus             CCCACCCCACCCTTTTAAATCTCTCATTTACATCTTCGATCTTCACCAAAAACTGTACAA
 
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JMFF006K12-           ATGGCTCCACCATCTTCTCCAACCAGTAGTTGCAGAGCCCTCTTTAAGCTACTGTCAGTA
                      ____________________________________________________________
consensus             ATGGCTCCACCATCTTCTCCAACCAGTAGTTGCAGAGCCCTCTTTAAGCTACTGTCAGTA
 
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JMFF006K12-           CTTCTTCTCCTTCTGCTCTCATTCCTTTCCCAGGTCCATTGTTATAGCACCAATGAATTC
JMSF052N05-                         GCTCTCATTCCTTTCCCAGGTCCATTGTTATAGCACCAATGAATTC
                      ____________________________________________________________
consensus             CTTCTTCTCCTTCTGCTCTCATTCCTTTCCCAGGTCCATTGTTATAGCACCAATGAATTC
 
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JMFF006K12-           AGTACTGTAANAANAATGTTGGAGGTTGATGAGGACGATGAANATCACCACCCTGCAGCA
JMSF052N05-           AGTACTGTAAGAAGAATGTTGGAGGTTGATGAGGACGATGAAGATCACCACCCTGCAGCA
                      ____________________________________________________________
consensus             AGTACTGTAAGAAGAATGTTGGAGGTTGATGAGGACGATGAAGATCACCACCCTGCAGCA
 
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JMFF006K12-           GCTTTCAAGATCAAGAAAACCACTACTGCTAAATCACTTTCTTCCAANAACAAAACCAAN
JMSF052N05-           GCTTTCAAGATCAAGAAAACCACTACTGCTAAATCACTTTCTTCCAAGAACAAAACCAAG
                      ____________________________________________________________
consensus             GCTTTCAAGATCAAGAAAACCACTACTGCTAAATCACTTTCTTCCAAGAACAAAACCAAG
 
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JMFF006K12-           ATCCTTAAACCTAGTACTACTGCTGCCTCTTCCAANAACCAAACTAAGGTTCTCAANACT
JMSF052N05-           ATCCTTAAACCTAGTACTACTGCTGCCTCTTCCAAGAACCAAACTAAGGTTCTCAAGACT
                      ____________________________________________________________
consensus             ATCCTTAAACCTAGTACTACTGCTGCCTCTTCCAAGAACCAAACTAAGGTTCTCAAGACT
 
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JMFF006K12-           GGGT                                                        
JMSF052N05-           GGGTCTGGGTTTGGATCAGCCAAGAACCAGACAAAACTCAAGCTTTCTTCTTCTTCTCTT
                      ____________________________________________________________
consensus             GGGTCTGGGTTTGGATCAGCCAAGAACCAGACAAAACTCAAGCTTTCTTCTTCTTCTCTT
 
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JMSF052N05-           TCTTCACTCTCCATTAAGAACAAAACCAAGCTTCTCAAACCCACTTCAGATTCTTCTAAG
                      ____________________________________________________________
consensus             TCTTCACTCTCCATTAAGAACAAAACCAAGCTTCTCAAACCCACTTCAGATTCTTCTAAG
 
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JMSF052N05-           GTTTCCCTTAAGAATCAGTTCAAGAAGCTGAATTCTACTACTTCATTGAAATCCTCATCA
                      ____________________________________________________________
consensus             GTTTCCCTTAAGAATCAGTTCAAGAAGCTGAATTCTACTACTTCATTGAAATCCTCATCA
 
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JMSF052N05-           AATTCAACCAAAACCACCAAGAAATCCTCAGATCTAACCAAGATTAGCTCTTTTTCCAAG
                      ____________________________________________________________
consensus             AATTCAACCAAAACCACCAAGAAATCCTCAGATCTAACCAAGATTAGCTCTTTTTCCAAG
 
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JMSF052N05-           AACAAAACCAGCAATGCTGCTGCTCAAGCAAAAGAACAGGTCAAATCCCAGGTAGAAAAG
                      ____________________________________________________________
consensus             AACAAAACCAGCAATGCTGCTGCTCAAGCAAAAGAACAGGTCAAATCCCAGGTAGAAAAG
 
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JMSF052N05-           AAGGTCCAAGAACCCAAATCACAATCCACCAAGAAGAGCTCCGGGGGAACCAAACCATTC
rJMSF052N05+                                                         AACCAAACCATTC
                      ____________________________________________________________
consensus             AAGGTCCAAGAACCCAAATCACAATCCACCAAGAAGAGCTCCGGGGGAACCAAACCATTC
 
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JMSF052N05-           TGGATTGACGATGAACAAGACGACTTGATTTCCGAGTTCAGAGACATGCCGTCGAAATTC
rJMSF052N05+          TGGATTGACGATGAACAAGACGACTTGATTTCCGAGTTCAGAGACATGCCGTCGAAATTC
                      ____________________________________________________________
consensus             TGGATTGACGATGAACAAGACGACTTGATTTCCGAGTTCAGAGACATGCCGTCGAAATTC
 
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JMSF052N05-           CAGGAAACCCTTTTCC                                            
rJMSF052N05+          CAGGAAACCCTTTTCCCGGATTTGGAGAGAATCTCGAAAACCTCGAAAGTTTATCTCAAC
                      ____________________________________________________________
consensus             CAGGAAACCCTTTTCCCGGATTTGGAGAGAATCTCGAAAACCTCGAAAGTTTATCTCAAC
 
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rJMSF052N05+          AGAGCCAACAAACAAATCACCAATAACTTCAAACCCATCGTGGGCAACAAGTACGCCCCC
                      ____________________________________________________________
consensus             AGAGCCAACAAACAAATCACCAATAACTTCAAACCCATCGTGGGCAACAAGTACGCCCCC
 
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rJMSF052N05+          ACCGTCGCCTCTTTCATCTCCTTCGCCTTCATCTTCATCCCTCTCATCCTCGTCTCCCTC
rJMFF006K12+                           CTCCTTCGCCTTCATCTTCATCCCTCTCATCCTCGTCTCCCTC
                      ____________________________________________________________
consensus             ACCGTCGCCTCTTTCATCTCCTTCGCCTTCATCTTCATCCCTCTCATCCTCGTCTCCCTC
 
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rJMSF052N05+          ATCTTCAACCGCTTCAAAGCCTATTTCTCCCTCCAAAAACTCCTCATTTTCGTCCAGATT
rJMFF006K12+          ATCTTCAACCGCTTCAAAGCCTATTTCTCCCTCCAAAAACTCCTCATTTTCGTCCAGATT
                      ____________________________________________________________
consensus             ATCTTCAACCGCTTCAAAGCCTATTTCTCCCTCCAAAAACTCCTCATTTTCGTCCAGATT
 
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rJMSF052N05+          TACCTCTCCATCTACTTCTCCATTCTCTGCCTCTCCTCGCTCGTCACCGGGCTCGAGCCG
rJMFF006K12+          TACCTCTCCATCTACTTCTCCATTCTCTGCCTCTCCTCGCTCGTCACCGGGCTCGAGCCG
                      ____________________________________________________________
consensus             TACCTCTCCATCTACTTCTCCATTCTCTGCCTCTCCTCGCTCGTCACCGGGCTCGAGCCG
 
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rJMSF052N05+          CTCAAGTTTTTCTACGCTACGTCGCAGTCCACCTACGTTTGCATACAGCTCCTCCAAACC
rJMFF006K12+          CTCAAGTTTTTCTACGCTACGTCGCAGTCGACCTACGTTTGCATACAGCTCCTCCAAACC
                      ____________________________________________________________
consensus             CTCAAGTTTTTCTACGCTACGTCGCAGTCGACCTACGTTTGCATACAGCTCCTCCAAACC
 
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rJMSF052N05+          CTCGCTTACGTCTTGTACCTTCTGATGCTCCTCATGTACCTCGTGCTAGTCTTCTCCACC
rJMFF006K12+          CTCGCTTACGTCTTGTACCTTCTGATGCTCCTCATGTACCTCGTGCTAGTCTTCTCCACC
                      ____________________________________________________________
consensus             CTCGCTTACGTCTTGTACCTTCTGATGCTCCTCATGTACCTCGTGCTAGTCTTCTCCACC
 
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rJMSF052N05+          GAAACTGGGCCGACCACGAAGATGATTGGGCTGGCCCAGACCATCGTGGGCTTTGCAGTT
rJMFF006K12+          GAAACTGGGCCGACCACGAAGATGATTGGGCTGGCCCAGACCATCGTGGGCTTTGCAGTT
                      ____________________________________________________________
consensus             GAAACTGGGCCGACCACGAAGATGATTGGGCTGGCCCAGACCATCGTGGGCTTTGCAGTT
 
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rJMSF052N05+          GGGCTGCATTACTACATGGCGGTGTTCCATAGGGCGGTGTTGCGCCAACCGCCCAAGACC
rJMFF006K12+          GGGCTGCATTACTACATGGCGGTGTTCCATAGGGCGGTGTTGCGCCAACCGCCCAAGACC
                      ____________________________________________________________
consensus             GGGCTGCATTACTACATGGCGGTGTTCCATAGGGCGGTGTTGCGCCAACCGCCCAAGACC
 
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rJMSF052N05+          AGCTGGAGGGTCCACGCGCTTTACGCCGCGTGTTTTCTCCTCATTTGTCTGTTAACTCAG
rJMFF006K12+          AGCTGGAGGGTCCACGCGCTTTACGCCGCGTGTTTTCTCCTCATTTGTCTGTTAACTCAG
                      ____________________________________________________________
consensus             AGCTGGAGGGTCCACGCGCTTTACGCCGCGTGTTTTCTCCTCATTTGTCTGTTAACTCAG
 
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rJMSF052N05+          GCTGAAAGGAGGAAGAAAGCTTATTTGGTTGAAGGTGGCGAGGAGGGCAAAAAGAATTAA
rJMFF006K12+          GCTGAAAGGAGGAAGAAAGCTTATTTGGTTGAAGGTGGCGAGGAGGGCAAAAAGAATTAA
                      ____________________________________________________________
consensus             GCTGAAAGGAGGAAGAAAGCTTATTTGGTTGAAGGTGGCGAGGAGGGCAAAAAGAATTAA
 
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rJMSF052N05+          ATATATATATATTTTTTTTGTGATATTCTTTTTACTTGAAGGGCCATAAAGAAATGTAAG
rJMFF006K12+          ATATATATATATTTTTTTTGTGATATTCTTTTTACTTGAAGGGCCATAAAGAAATGTAAG
                      ____________________________________________________________
consensus             ATATATATATATTTTTTTTGTGATATTCTTTTTACTTGAAGGGCCATAAAGAAATGTAAG
 
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rJMSF052N05+          CTCAAGTTATTATATTTTTGTTTATTATCTTTTTAGCAAATTGTAATTTATTATTATTAT
rJMFF006K12+          CTCAAGTTATTATATTTTTGTTTATTATCTTTTTAGCAAATTGTAATTTATTATTATTAT
                      ____________________________________________________________
consensus             CTCAAGTTATTATATTTTTGTTTATTATCTTTTTAGCAAATTGTAATTTATTATTATTAT
 
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rJMSF052N05+          CATTATATTATAAATGCTAT                                        
rJMFF006K12+          CATTATATTATAAATGCTATTAATAAAGGGTGCAAAGGAAACTGGAGTTTCGACCACTCA
                      ____________________________________________________________
consensus             CATTATATTATAAATGCTATTAATAAAGGGTGCAAAGGAAACTGGAGTTTCGACCACTCA