Contig 013618:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF006A02Sequence493013618 (8)ref|XP_009598273.1|2e-34PREDICTED: uncharacterized protein LOC104094115 isoform X2 [Nicotiana tomentosi776013618 (8)ref|XP_009598273.1|5e-35PREDICTED: uncharacterized protein LOC104094115 isoform X2 [Nicotiana tomentosi
JMSF007M23Sequence371013618 (8)ref|XP_009772445.1|2e-28PREDICTED: uncharacterized protein LOC104222826 isoform X2 [Nicotiana sylvestri757013618 (8)ref|XP_009598273.1|4e-37PREDICTED: uncharacterized protein LOC104094115 isoform X2 [Nicotiana tomentosi
JMSF043L08Sequence748013618 (8)ref|XP_009598273.1|5e-37PREDICTED: uncharacterized protein LOC104094115 isoform X2 [Nicotiana tomentosi690013618 (8)ref|XP_009598273.1|5e-34PREDICTED: uncharacterized protein LOC104094115 isoform X2 [Nicotiana tomentosi
JMSF049L24Sequence662013618 (8)ref|XP_009598273.1|3e-37PREDICTED: uncharacterized protein LOC104094115 isoform X2 [Nicotiana tomentosi692013618 (8)ref|XP_009598273.1|2e-37PREDICTED: uncharacterized protein LOC104094115 isoform X2 [Nicotiana tomentosi

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF007M23-                                                            GGGTAGGCAAA
JMSF049L24-                                                                 GGCAAA
                      ____________________________________________________________
consensus                                                              GGGTAGGCAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF007M23-           TCAGTACGGAGTACTCCGTCATTCTCAACTCCTTCTGCCTTTTAACTAAACCTCTCTTAT
JMSF049L24-           TCAGTACGGAGTACTCCGTCATTCTCAACTCCTTCTGCCTTTTAACTAAACCTCTCTTAT
JMSF043L08-                  GGAGTACTCCGTCATTCTCAACTCCTTCTGCCTTTTAACTAAACCTCTCTTAT
                      ____________________________________________________________
consensus             TCAGTACGGAGTACTCCGTCATTCTCAACTCCTTCTGCCTTTTAACTAAACCTCTCTTAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF007M23-           CTCCCATGGCAGAGCACGAAGAGGATCGCAAAGCTTCTACCATTTCAAAGCGCAAAAAGG
JMFF006A02-                ATGGCAGAGCACGAAGAGGATCGCAAAGCTTCTACCATTTCAAAGCGCAAAAAGG
JMSF049L24-           CTCCCATGGCAGAGCACGAAGAGGATCGCAAAGCTTCTACCATTTCAAAGCGCAAAAAGG
JMSF043L08-           CTCCCATGGCAGAGCACGAAGAGGATCGCAAAGCTTCTACCATTTCAAAGCGCAAAAAGG
rJMSF049L24+               ATGGCAGAGCACGAAGAGGATCGCAAAGCTTCTACCATTTCAAAGCGCAAAAAGG
rJMSF007M23+              CATGGCAGAGCACGAAGAGGATCGCAAAGCTTCTACCATTTCAAAGCGCAAAAAGG
rJMFF006A02+               ATGGCAGAGCACGAAGAGGATCGCAAAGCTTCTACCATTTCAAAGCGCAAAAAGG
                      ____________________________________________________________
consensus             CTCCCATGGCAGAGCACGAAGAGGATCGCAAAGCTTCTACCATTTCAAAGCGCAAAAAGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF007M23-           AATCTCCTCCG-TTTGTGGAGGTGATCTGCGACCGCACAAAAAAGACATGGAGGTTTGCA
JMFF006A02-           AATCTCCTCCG-TTTGTGGAGGTGATCTGCGACCGCACAAAAAAGACATGGAGGTTTGCA
JMSF049L24-           AATCTCCTCCG-TTTGTGGAGGTGATCTGCGACCGCACAAAAAAGACATGGAGGTTTGCA
JMSF043L08-           AATCTCCTCCG-TTTGTGGAGGTGATCTGCGACCGCACAAAAAAGACATGGAGGTTTGCA
rJMSF049L24+          AATCTCCTCCG-TTTGTGGAGGTGATCTGCGACCGCACAAAAAAGACATGGAGGTTTGCA
rJMSF007M23+          AATCTCCTCCG-TTTGTGGAGGTGATCTGCGACCGCACAAAAAAGACATGGAGGTTTGCA
rJMSF043L08+                           GGAGGTGATCTGCGACCGCACAAAAAAGACATGGAGGTTTGCA
rJMFF006A02+          AATCTCCTCCGTTTTGTGGAGGTGATCTGCGACCGCACAAAAAAGACATGGAGGTTTGCA
                      ____________________________________________________________
consensus             AATCTCCTCCG-TTTGTGGAGGTGATCTGCGACCGCACAAAAAAGACATGGAGGTTTGCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF007M23-           GCCGGGACGGAGGCCAAATTTGCCGTCAAAATGATAAACAGCAAGCTCGATTCCAAATAT
JMFF006A02-           GCCGGGACGGAGGCCAAATTTGCCGTCAAAATGATAAACAGCAAGCTCGATTCCAAATAT
JMSF049L24-           GCCGGGACGGAGGCCAAATTTGCCGTCAAAATGATAAACAGCAAGCTCGATTCCAAATAT
JMSF043L08-           GCCGGGACGGAGGCCAAATTTGCCGTCAAAATGATAAACAGCAAGCTCGATTCCAAATAT
rJMSF049L24+          GCCGGGACGGAGGCCAAATTTGCCGTCAAAATGATAAACAGCAAGCTCGATTCCAAATAT
rJMSF007M23+          GCCGGGACGGAGGCCAAATTTGCCGTCAAAATGATAAACAGCAAGCTCGATTCCAAATAT
rJMSF043L08+          GCCGGGACGGAGGCCAAATTTGCCGTCAAAATGATAAACAGCAAGCTCGATTCCAAATAT
rJMFF006A02+          GCCGGGACGGAGGCCAAATTTGCCGTCAAAATGATAAACAGCAAGCTCGATTCCAAATAT
                      ____________________________________________________________
consensus             GCCGGGACGGAGGCCAAATTTGCCGTCAAAATGATAAACAGCAAGCTCGATTCCAAATAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF007M23-           CAGCTGCCCCCTGGAACGCTTATAGAAGCGGTCAAAGACGGCGAAGAGTCCGTAATGTTC
JMFF006A02-           CAGCTGCCCCCTGGAACGCTTATAGAAGCGGTCAAAGACGGCGAAGAGTCCGTAATGTTC
JMSF049L24-           CAGCTGCCCCCTGGAACGCTTATAGAAGCGGTCAAAGACGGCGAAGAGTCCGTAATGTTC
JMSF043L08-           CAGCTGCCCCCTGGAACGCTTATAGAAGCGGTCAAAGACGGCGAAGAGTCCGTAATGTTC
rJMSF049L24+          CAGCTGCCCCCTGGAACGCTTATAGAAGCGGTCAAAGACGGCGAAGAGTCCGTAATGTTC
rJMSF007M23+          CAGCTGCCCCCTGGAACGCTTATAGAAGCGGTCAAAGACGGCGAAGAGTCCGTAATGTTC
rJMSF043L08+          CAGCTGCCCCCTGGAACGCTTATAGAAGCGGTCAAAGACGGCGAAGAGTCCGTAATGTTC
rJMFF006A02+          CAGCTGCCCCCTGGAACGCTTATAGAAGCGGTCAAAGACGGCGAAGAGTCCGTAATGTTC
                      ____________________________________________________________
consensus             CAGCTGCCCCCTGGAACGCTTATAGAAGCGGTCAAAGACGGCGAAGAGTCCGTAATGTTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF007M23-           GGCCCCAATGCGGTGCTCGTCAATTACGGCGACGGTTGGAGTCTGCGGACTGCTACTGAT
JMFF006A02-           GGCCCCAATGCGGTGCTCGTCAATTACGGCGACGGTTGGAGTCTGCGGACTGCTACTGAT
JMSF049L24-           GGCCCCAATGCGGTGCTCGTCAATTACGGCGACGGTTGGAGTCTGCGGACTGCTACTGAT
JMSF043L08-           GGCCCCAATGCGGTGCTCGTCAATTACGGCGACGGTTGGAGTCTGCGGACTGCTACTGAT
rJMSF049L24+          GGCCCCAATGCGGTGCTCGTCAATTACGGCGACGGTTGGAGTCTGCGGACTGCTACTGAT
rJMSF007M23+          GGCCCCAATGCGGTGCTCGTCAATTACGGCGACGGTTGGAGTCTGCGGACTGCTACTGAT
rJMSF043L08+          GGCCCCAATGCGGTGCTCGTCAATTACGGCGACGGTTGGAGTCTGCGGACTGCTACTGAT
rJMFF006A02+          GGCCCCAATGCGGTGCTCGTCAATTACGGCGACGGTTGGAGTCTGCGGACTGCTACTGAT
                      ____________________________________________________________
consensus             GGCCCCAATGCGGTGCTCGTCAATTACGGCGACGGTTGGAGTCTGCGGACTGCTACTGAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF007M23-           C                                                           
JMFF006A02-           CCCGCCGGTTTTGGGAGGGCTAAGCAGGACAACACCGTGGTGATGGGACAAGCATATCAT
JMSF049L24-           CCCGCCGGTTTTGGGAGGGCTAAGCAGGACAACACCGTGGTGATGGGACAAGCATATCAT
JMSF043L08-           CCCGCCGGTTTTGGGAGGGCTAAGCAGGACAACACCGTGGTGATGGGACAAGCATATCAT
rJMSF049L24+          CCCGCCGGTTTTGGGAGGGCTAAGCAGGACAACACCGTGGTGATGGGACAAGCATATCAT
rJMSF007M23+          CCCGCCGGTTTTGGGAGGGCTAAGCAGGACAACACCGTGGTGATGGGACAAGCATATCAT
rJMSF043L08+          CCCGCCGGTTTTGGGAGGGCTAAGCAGGACAACACCGTGGTGATGGGACAAGCATATCAT
rJMFF006A02+          CCCGCCGGTTTTGGGAGGGCTAAGCAGGACAACACCGTGGTGATGGGACAAGCATATCAT
                      ____________________________________________________________
consensus             CCCGCCGGTTTTGGGAGGGCTAAGCAGGACAACACCGTGGTGATGGGACAAGCATATCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF006A02-           CCCCCCACCATGGGATTGGATTACCAACTTACAAAGAGGACATCANAAGGGGCTTCCAAG
JMSF049L24-           CCCCCCACCATGGGATTGGATTACCAACTTACAAAGAGGACATCAGAAGGGGCTTCCAAG
JMSF043L08-           CCCCCCACCATGGGATTGGATTACCAACTTACAAAGAGGACATCAGAAGGGGCTTCCAAG
rJMSF049L24+          CCCCCCACCATGGGATTGGATTACCAACTTACAAAGAGGACATCAGAAGGGGCTTCCAAG
rJMSF007M23+          CCCCCCACCATGGGATTGGATTACCAACTTACAAAGAGGACATCAGAAGGGGCTTCCAAG
rJMSF043L08+          CCCCCCACCATGGGATTGGATTACCAACTTACAAAGAGGACATCAGAAGGGGCTTCCAAG
rJMFF006A02+          CCCCCCACCATGGGATTGGATTACCAACTTACAAAGAGGACATCAGAAGGGGCTTCCAAG
                      ____________________________________________________________
consensus             CCCCCCACCATGGGATTGGATTACCAACTTACAAAGAGGACATCAGAAGGGGCTTCCAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF006A02-           GCCTTATACATCGGAAAGATATTGCTTGCATTTATATTTATATTTTTGTTAGGTGCAATA
JMSF049L24-           GCCTTATACATCGGAAAGATATTGCTTGCATTTATATTTATATTTTTGTTAGGTGCAATA
JMSF043L08-           GCCTTATACATCGGAAAGATATTGCTTGCATTTATATTTATATTTTTGTTAGGTGCAATA
rJMSF049L24+          GCCTTATACATCGGAAAGATATTGCTTGCATTTATATTTATATTTTTGTTAGGTGCAATA
rJMSF007M23+          GCCTTATACATCGGAAAGATATTGCTTGCATTTATATTTATATTTTTGTTAGGTGCAATA
rJMSF043L08+          GCCTTATACATCGGAAAGATATTGCTTGCATTTATATTTATATTTTTGTTAGGTGCAATA
rJMFF006A02+          GCCTTATACATCGGAAAGATATTGCTTGCATTTATATTTATATTTTTGTTAGGTGCAATA
                      ____________________________________________________________
consensus             GCCTTATACATCGGAAAGATATTGCTTGCATTTATATTTATATTTTTGTTAGGTGCAATA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFF006A02-           TTCACCTTGATGCTGGAAA                                         
JMSF049L24-           TTCACCTTGATGCTGGAAAGCCTTCCGAAGCTAGTTGAGTATCGTCAACATAGTAATGAA
JMSF043L08-           TTCACCTTGATGCTGGAAAGCCTTCCGAAGCTAGTTGAGTATCGTCAACATAGTAATGAA
rJMSF049L24+          TTCACCTTGATGCTGGAAAGCCTTCCGAAGCTAGTTGAGTATCGTCAACATAGTAATGAA
rJMSF007M23+          TTCACCTTGATGCTGGAAAGCCTTCCGAAGCTAGTTGAGTATCGTCAACATAGTAATGAA
rJMSF043L08+          TTCACCTTGATGCTGGAAAGCCTTCCGAAGCTAGTTGAGTATCGTCAACATAGTAATGAA
rJMFF006A02+          TTCACCTTGATGCTGGAAAGCCTTCCGAAGCTAGTTGAGTATCGTCAACATAGTAATGAA
                      ____________________________________________________________
consensus             TTCACCTTGATGCTGGAAAGCCTTCCGAAGCTAGTTGAGTATCGTCAACATAGTAATGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF049L24-           ACCGGGTTCCGAAGCTAGTTGAGTATCGTCAACATAGTAATGGAACCGGGTAAAA     
JMSF043L08-           ACCGGGTTCCGAAGCTAGTTGAGTATCGTCAACATAGTAATGGAACCGGGTAAAATGCCG
rJMSF049L24+          ACCGGGTTCCGAAGCTAGTTGAGTATCGTCAACATAGTAATGGAACCGGGTAAAATGCCG
rJMSF007M23+          ACCGGGTTCCGAAGCTAGTTGAGTATCGTCAACATAGTAATGGAACCGGGTAAAATGCCG
rJMSF043L08+          ACCGGGTTCCGAAGCTAGTTGAGTATCGTCAACATAGTAATGGAACCGGGTAAAATGCCG
rJMFF006A02+          ACCGGGTTCCGAAGCTAGTTGAGTATCGTCAACATAGTAATGGAACCGGGTAAAATGCCG
                      ____________________________________________________________
consensus             ACCGGGTTCCGAAGCTAGTTGAGTATCGTCAACATAGTAATGGAACCGGGTAAAATGCCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF043L08-           ATTTCCTTACCTTCATGTGTTATTTATCTCACACTCAAAACCATAGTATAANAGTTTGTC
rJMSF049L24+          ATTTCCTTACCTTCATGTGTTATTTATCTCACACTCAAAACCATAGTATAAGAGTTTGTC
rJMSF007M23+          ATTTCCTTACCTTCATGTGTTATTTATCTCACACTCAAAACCATAGTATAAGAGTTTGTC
rJMSF043L08+          ATTTCCTTACCTTCATGTGTTATTTATCTCACACTCAAAACCATAGTATAAGAGTTTGTC
rJMFF006A02+          ATTTCCTTACCTTCATGTGTTATTTATCTCACACTCAAAACCATAGTATAAGAGTTTGTC
                      ____________________________________________________________
consensus             ATTTCCTTACCTTCATGTGTTATTTATCTCACACTCAAAACCATAGTATAAGAGTTTGTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMSF043L08-           AGGTATGAGTTAATTATTGGTCAATCGATAGTGAA                         
rJMSF049L24+          AGGTATGAGTTAATTATTGGTCAATCGATAGTGAATCC                      
rJMSF007M23+          AGGTATGAGTTAATTATTGGTCAATCGATAGTGAATCCTTGTTGATTGTATAAATTCTCA
rJMSF043L08+          AGGTATGAGTTAATTATTGGTCAATCGATAGTGAATCCTTGTTGATTGTATAAATTCTCA
rJMFF006A02+          AGGTATGAGTTAATTATTGGTCAATCGATAGTGAATCCTTGTTGATTGTATAAATTCTCA
                      ____________________________________________________________
consensus             AGGTATGAGTTAATTATTGGTCAATCGATAGTGAATCCTTGTTGATTGTATAAATTCTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF007M23+          TGTGTGAATATAAGTGTTTTGTAATAATCCTATCT                         
rJMSF043L08+          TGTGTGAATATAAGTGTTTTGTAATAATCCTATCT                         
rJMFF006A02+          TGTGTGAATATAAGTGTTTTGTAATAATCCTATCTTGTTGATTGCTATTATTAGTAATAA
                      ____________________________________________________________
consensus             TGTGTGAATATAAGTGTTTTGTAATAATCCTATCTTGTTGATTGCTATTATTAGTAATAA