Contig 013616:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF005L04Sequence501013616 (2)ref|XP_010316318.1|107PREDICTED: uncharacterized protein LOC104645727 [Solanum lycopersicum]654013616 (2)ref|XP_009626017.1|174PREDICTED: uncharacterized protein LOC104116785 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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JMFF005L04-                                          GCTCTTTTTCTCTGTCTCTTCTATCCTCC
                      ____________________________________________________________
consensus                                            GCTCTTTTTCTCTGTCTCTTCTATCCTCC
 
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JMFF005L04-           TCTCTGCATTTTAGGCATTTCCACTTTATTTTTCGCTCCATAATCATACACTTCTCGAGT
                      ____________________________________________________________
consensus             TCTCTGCATTTTAGGCATTTCCACTTTATTTTTCGCTCCATAATCATACACTTCTCGAGT
 
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JMFF005L04-           CTGGAAAAAGGGGAACTCAGAAAATCCATGGCGGAAGACAAACCGGCCTAGATCTCAATT
                      ____________________________________________________________
consensus             CTGGAAAAAGGGGAACTCAGAAAATCCATGGCGGAAGACAAACCGGCCTAGATCTCAATT
 
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JMFF005L04-           CTCCACTTCTTAAGCTCTTGTGGGGGTTCAGGAATCGTACGCTTTACTGATTTGTAGAGA
rJMFF005L04+                TTCTTAAGCTCTTGTGGGGGTTCAGGAATCGTACGCTTTACTGATTTGTAGAGA
                      ____________________________________________________________
consensus             CTCCACTTCTTAAGCTCTTGTGGGGGTTCAGGAATCGTACGCTTTACTGATTTGTAGAGA
 
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JMFF005L04-           CGGTTAAGTTTGGATCCGAGAAATGGCGACTCTGCAAAAATTCAAGCTCTTAGCGACGCA
rJMFF005L04+          CGGTTAAGTTTGGATCCGAGAAATGGCGACTCTGCAAAAATTCAAGCTCTTAGCGACGCA
                      ____________________________________________________________
consensus             CGGTTAAGTTTGGATCCGAGAAATGGCGACTCTGCAAAAATTCAAGCTCTTAGCGACGCA
 
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JMFF005L04-           GTGTGCCGTAGCGGGAAGCCCGACCCGGAGCCCATCTGCGAGCCCGGTAATCCACCTCCG
rJMFF005L04+          GTGTGCCGTAGCGGGAAGCCCGACCCGGAGCCCATCTGCGAGCCCGGTAATCCACCTCCG
                      ____________________________________________________________
consensus             GTGTGCCGTAGCGGGAAGCCCGACCCGGAGCCCATCTGCGAGCCCGGTAATCCACCTCCG
 
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JMFF005L04-           TCGCCGGAAGACTCTTCGTATGCTGCTCAGCCGCGGCGGAGGGAGCGGTAGCGGACGGAG
rJMFF005L04+          TCGCCGGAAGACTCTTCGTATGCTGCTCAGCCGCGGCGGAGGGAGCGGTAGCGGACGGAG
                      ____________________________________________________________
consensus             TCGCCGGAAGACTCTTCGTATGCTGCTCAGCCGCGGCGGAGGGAGCGGTAGCGGACGGAG
 
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JMFF005L04-           GCTTCCGCCGCGGGATAATTGCTCGCCGGATCAGCTCGCGGAACGCCGAGATTCTCCGGA
rJMFF005L04+          GCTTCCGCCGCGGGATAATTGCTCGCCGGATCAGCTCGCGGAACGCCGAGATTCTCCGGA
                      ____________________________________________________________
consensus             GCTTCCGCCGCGGGATAATTGCTCGCCGGATCAGCTCGCGGAACGCCGAGATTCTCCGGA
 
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JMFF005L04-           GAAGCGGGCGAGCCACAAGCATAAGCTCANGGACTTGTTCGTGTCGTCGCCT        
rJMFF005L04+          GAAGCGGGCGAGCCACAAGCATAAGCTCAGGGACTTGTTCGTGTCGTCGCCTCCGTCGTT
                      ____________________________________________________________
consensus             GAAGCGGGCGAGCCACAAGCATAAGCTCAGGGACTTGTTCGTGTCGTCGCCTCCGTCGTT
 
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rJMFF005L04+          CGAAGAGCGGTCGTCTACAAATGCAGGAGGACAGGGGCTCCCTCCGGCGGCGAATCGCGC
                      ____________________________________________________________
consensus             CGAAGAGCGGTCGTCTACAAATGCAGGAGGACAGGGGCTCCCTCCGGCGGCGAATCGCGC
 
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rJMFF005L04+          CGGTGGAGGCTCCGTCATTCGGAGATTCGGGGACCGCTCGCCTCGACCGTTGTCGGCGAC
                      ____________________________________________________________
consensus             CGGTGGAGGCTCCGTCATTCGGAGATTCGGGGACCGCTCGCCTCGACCGTTGTCGGCGAC
 
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rJMFF005L04+          GATACGTCAACGGTTACTTAGGCGAGCTTGGCGACCGGTGCTGGTGGCCATACCTGAGTA
                      ____________________________________________________________
consensus             GATACGTCAACGGTTACTTAGGCGAGCTTGGCGACCGGTGCTGGTGGCCATACCTGAGTA
 
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rJMFF005L04+          ATTTTTTATAATTTTTTTTTGGAATTGTACGGATAACCATAGATTATAATTAAAATAAAT
                      ____________________________________________________________
consensus             ATTTTTTATAATTTTTTTTTGGAATTGTACGGATAACCATAGATTATAATTAAAATAAAT
 
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rJMFF005L04+          AAATACGGAGTAAGTTTTTCGAATCCGTACTTGTTCTGTATAAGATTATAAGTTAATTAA
                      ____________________________________________________________
consensus             AAATACGGAGTAAGTTTTTCGAATCCGTACTTGTTCTGTATAAGATTATAAGTTAATTAA