Contig 013615:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF022F09+                                                GGTGATGNAGGAGTATGGAGTT
                      ____________________________________________________________
consensus                                                   GGTGATGNAGGAGTATGGAGTT
 
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rJMSF022F09+          GCGGAATCTTGGACTAAAGTGGTGTCTTTCACGCTGTCTGATCATCATAGGGGCTATATC
                      ____________________________________________________________
consensus             GCGGAATCTTGGACTAAAGTGGTGTCTTTCACGCTGTCTGATCATCATAGGGGCTATATC
 
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rJMSF022F09+          ACTGTGTTGCATATGTCTGAGAATGGCGAGGAGGTCTTGCTGAAGCTTGGAACCCAGCTT
                      ____________________________________________________________
consensus             ACTGTGTTGCATATGTCTGAGAATGGCGAGGAGGTCTTGCTGAAGCTTGGAACCCAGCTT
 
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rJMSF022F09+          GCGGTTTATAATTCGAGGAATGGATCGTTTAAGCATGTCGAGTGTGTTGCCTCTCCCCGC
rJMFF005K18+                       CGAGGAATGGATCGTTTAAGCATGTCGAGTGTGTTGCCTCTCCCCGC
                      ____________________________________________________________
consensus             GCGGTTTATAATTCGAGGAATGGATCGTTTAAGCATGTCGAGTGTGTTGCCTCTCCCCGC
 
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rJMSF022F09+          ACTATTGAGGTTCAATCAGCTACCTATGATGAGAGCCTGGCGTTGCTGGATATTGGCCAT
rJMFF005K18+          ACTATTGAGGTTCAATCAGCTACCTATGATGAGAGCCTGGCGTTGCTGGATATTGGCCAT
                      ____________________________________________________________
consensus             ACTATTGAGGTTCAATCAGCTACCTATGATGAGAGCCTGGCGTTGCTGGATATTGGCCAT
 
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rJMSF022F09+          GACAGCCAAATCTAAGCAAGAAAAGAGAGAACTAATATGAACAAAACCGAGATTGTTAAA
rJMFF005K18+          GACAGCCAAATCTAAGCAAGAAAAGAGAGAACTAATATGAACAAAACCGAGATTGTTAAA
                      ____________________________________________________________
consensus             GACAGCCAAATCTAAGCAAGAAAAGAGAGAACTAATATGAACAAAACCGAGATTGTTAAA
 
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rJMSF022F09+          TTGGAGTTATTCTGCTGTTCGTGATAAAGAACTCGTAGTCCCACGCTCCTAGATGCAGAA
rJMFF005K18+          TTGGAGTTATTCTGCTGTTCGTGATAAAGAACTCGTAGTCCCACGCTCCTAGATGCAGAA
                      ____________________________________________________________
consensus             TTGGAGTTATTCTGCTGTTCGTGATAAAGAACTCGTAGTCCCACGCTCCTAGATGCAGAA
 
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rJMSF022F09+          AACGAAGGTTCTATCTCAGAATCGCGGTTTTATGGCAGCAAGGAAGTGCAAGAGTAAGGG
rJMFF005K18+          AACGAAGGTTCTATCTCAGAATCGCGGTTTTATGGCAGCAAGGAAGTGCAAGAGTAAGGG
                      ____________________________________________________________
consensus             AACGAAGGTTCTATCTCAGAATCGCGGTTTTATGGCAGCAAGGAAGTGCAAGAGTAAGGG
 
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rJMSF022F09+          CTTCACTCGGTTTCTTGAGTGACAGCCCAACCTTACTGCAGAAAAACCAAGATTCTGCTG
rJMFF005K18+          CTTCACTCGGTTTCTTGAGTGACAGCCCAACCTTACTGCAGAAAAACCAAGATTCTGCTG
                      ____________________________________________________________
consensus             CTTCACTCGGTTTCTTGAGTGACAGCCCAACCTTACTGCAGAAAAACCAAGATTCTGCTG
 
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rJMSF022F09+          ACCAAGAATCTCAAGTTTGTGGCCTCAAACAGGTCGAAATGTTAAGAATCTAAATCGTCA
rJMFF005K18+          ACCAAGAATCTCAAGTTTGTGGCCTCAAACAGGTCGAAATGTTAAGAATCTAAATCGTCA
                      ____________________________________________________________
consensus             ACCAAGAATCTCAAGTTTGTGGCCTCAAACAGGTCGAAATGTTAAGAATCTAAATCGTCA
 
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rJMSF022F09+          TCATGTCTTGGAAGTGATAAAGAATGTGTGTTTGCTGTTACATGTTGGAAATAGTATATG
rJMFF005K18+          TCATGTCTTGGAAGTGATAAAGAATGTGTGTTTGCTGTTACATGTTGGAAATAGTATATG
                      ____________________________________________________________
consensus             TCATGTCTTGGAAGTGATAAAGAATGTGTGTTTGCTGTTACATGTTGGAAATAGTATATG
 
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rJMSF022F09+          AAATATGTATGTATGTAGTGTCAACTTCTGTTAGTATTCTGAGCTGTGTATATCAGATAT
rJMFF005K18+          AAATATGTATGTATGTAGTGTCAACTTCTGTTAGTATTCTGAGCTGTGTATATCAGATAT
                      ____________________________________________________________
consensus             AAATATGTATGTATGTAGTGTCAACTTCTGTTAGTATTCTGAGCTGTGTATATCAGATAT
 
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rJMSF022F09+          GGAGCTGGATCAAGTTTATGTTATTGTCATTCAGTGTCCAATAATGAGCAATACAATATA
rJMFF005K18+          GGAGCTGGATCAAGTTTATGTTATTGTCATTCAGTGTCCAATAATGAGCAATACAATATA
                      ____________________________________________________________
consensus             GGAGCTGGATCAAGTTTATGTTATTGTCATTCAGTGTCCAATAATGAGCAATACAATATA
 
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rJMSF022F09+          GTGATCCAGCATTCACATTAGTGTTCAACAATCAG                         
rJMFF005K18+          GTGATCCAGCATTCACATTAGTGTTCAACAATCAGTAAAACTACGCAATTGATTATTTTG
                      ____________________________________________________________
consensus             GTGATCCAGCATTCACATTAGTGTTCAACAATCAGTAAAACTACGCAATTGATTATTTTG
 
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rJMFF005K18+          TTTTGTATTCACAAGTTCCTTTCAAATACTGTAATCGCACAGTATTAACATATTAGGATT
                      ____________________________________________________________
consensus             TTTTGTATTCACAAGTTCCTTTCAAATACTGTAATCGCACAGTATTAACATATTAGGATT