| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF005G11 | Sequence | 505 | 013612 (8) | gb|KDO78982.1| | 2e-56 | hypothetical protein CISIN_1g014406mg [Citrus sinensis] | 724 | 013612 (8) | ref|XP_009594459.1| | 5e-134 | PREDICTED: casein kinase II subunit alpha-2-like [Nicotiana tomentosiformis] emb |
| JMFF032P09 | Sequence | 630 | 013612 (8) | gb|KDO78982.1| | 7e-72 | hypothetical protein CISIN_1g014406mg [Citrus sinensis] | 786 | 013612 (8) | ref|XP_009594459.1| | 2e-149 | PREDICTED: casein kinase II subunit alpha-2-like [Nicotiana tomentosiformis] emb |
| JMFS075B05 | Sequence | 482 | 013612 (8) | ref|XP_009594459.1| | 6e-61 | PREDICTED: casein kinase II subunit alpha-2-like [Nicotiana tomentosiformis] emb | |||||
| JMSF029B17 | Sequence | 654 | 013612 (8) | emb|CDP02578.1| | 1e-78 | unnamed protein product [Coffea canephora] | 707 | 013612 (8) | gb|AAK54616.1|AF374474_1 | 4e-133 | CK2 alpha subunit [Nicotiana tabacum] |
| JMSF039E05 | Sequence | 695 | 016841 | gb|KDO78982.1| | 2e-71 | hypothetical protein CISIN_1g014406mg [Citrus sinensis] | 879 | 013612 (8) | ref|XP_009594459.1| | 0.0 | PREDICTED: casein kinase II subunit alpha-2-like [Nicotiana tomentosiformis] emb |
This contig is upended
. : . : . : . : . : . :
JMFF032P09- GATCCATTTCTACTGTCACTCTCTTCCCAAAACGAACACAAATTCGATCCGCTCA
JMSF029B17- GGAGATCCATTTCTACTGTCACTCTCTTCCCAAAACGAACACAAATTCGATCCGCTCA
____________________________________________________________
consensus GGAGATCCATTTCTACTGTCACTCTCTTCCCAAAACGAACACAAATTCGATCCGCTCA
. : . : . : . : . : . :
JMFF005G11- CTGCTTCGTTGATATCGCTCTTGTGACCACCGGGCGGTGTTAACTAAGCTGCTGGT
JMFF032P09- CCTTCTGCTTCGTTGATATCGCTCTTGTGACCACCGGGCGGTGTTAACTAAGCTGCTGGT
JMSF029B17- CCTTCTGCTTCGTTGATATCGCTCTTGTGACCACCGGGCGGTGTTAACTAAGCTGCTGGT
____________________________________________________________
consensus CCTTCTGCTTCGTTGATATCGCTCTTGTGACCACCGGGCGGTGTTAACTAAGCTGCTGGT
. : . : . : . : . : . :
JMFF005G11- GGTGATCGATGCTCAACTTCCAAACTGCCGCCGTTCTCAGCCGCAAGTAGTCCAATCGCC
JMFF032P09- GGTGATCGATGCTCAACTTCCAAACTGCCGCCGTTCTCAGCCGCAAGTAGTCCAATCGCC
JMSF029B17- GGTGATCGATGCTCAACTTCCAAACTGCCGCCGTTCTCAGCCGCAAGTAGTCCAATCGCC
____________________________________________________________
consensus GGTGATCGATGCTCAACTTCCAAACTGCCGCCGTTCTCAGCCGCAAGTAGTCCAATCGCC
. : . : . : . : . : . :
JMFF005G11- TTCTTTTGCTTCTCCGGGACGGGGATTGGATTCGCTCCAAAGCCATGTCCAGATCTCGAG
JMFF032P09- TTCTTTTGCTTCTCCGGGACGGGGATTGGATTCGCTCCAAAGCCATGTCCAGATCTCGAG
JMSF029B17- TTCTTTTGCTTCTCCGGGACGAGGATTGGATTCGCTCCAAAGCCATGTCCAGATCTCGAG
____________________________________________________________
consensus TTCTTTTGCTTCTCCGGGACGGGGATTGGATTCGCTCCAAAGCCATGTCCAGATCTCGAG
. : . : . : . : . : . :
JMFF005G11- TTTATGCAGACATCAATGTGGTTCGCCCTAGGGAGTATTGGGATTACGAATCGCTCACTG
JMFF032P09- TTTATGCAGACATCAATGTGGTTCGCCCTAGGGAGTATTGGGATTACGAATCGCTCACTG
JMSF029B17- TTTATGCAGACATCAATGTGGTTCGCCCTAGGGAGTATTGGGATTACGAATCGCTCACTG
____________________________________________________________
consensus TTTATGCAGACATCAATGTGGTTCGCCCTAGGGAGTATTGGGATTACGAATCGCTCACTG
. : . : . : . : . : . :
JMFF005G11- TTCAGTGGGGTGACCAGGATGACTATGAAGTTGTTCGGAAAGTCGGAAGAGGAAAATACA
JMFF032P09- TTCAGTGGGGTGACCAGGATGACTATGAAGTTGTTCGGAAAGTCGGAAGAGGAAAATACA
JMSF029B17- TTCAGTGGGGTGACCAGGATGACTATGAAGTTGTTCGGAAAGTCGGAAGAGGAAAATACA
____________________________________________________________
consensus TTCAGTGGGGTGACCAGGATGACTATGAAGTTGTTCGGAAAGTCGGAAGAGGAAAATACA
. : . : . : . : . : . :
JMFF005G11- GTGAAGTGTTTGAGGGTATAAATGTCAATAGCAATGAGAGGTGCATAATTAAGATTTTGA
JMFF032P09- GTGAAGTGTTTGAGGGTATAAATGTCAATAGCAATGAGAGGTGCATAATTAAGATTTTGA
JMSF029B17- GTGAAGTGTTTGAGGGTATAAATGTCAATAGCAATGAGAGGTGCATAATTAAGATTTTGA
____________________________________________________________
consensus GTGAAGTGTTTGAGGGTATAAATGTCAATAGCAATGAGAGGTGCATAATTAAGATTTTGA
. : . : . : . : . : . :
JMFF005G11- AGCCTGTTAAGAAGAAGAAGATTAAGAGAGAGATCAAAATATTGCAGAACCTCTGTGGAG
JMFF032P09- AGCCTGTTAAGAAGAAGAAGATTAAGAGAGAGATCAAAATATTGCAGAACCTCTGTGGAG
JMSF029B17- AGCCTGTTAAGAAGAAGAAGATTAAGAGAGAGATCAAAATATTGCAGAACCTCTGTGGAG
rJMSF039E05+ TGGAG
____________________________________________________________
consensus AGCCTGTTAAGAAGAAGAAGATTAAGAGAGAGATCAAAATATTGCAGAACCTCTGTGGAG
. : . : . : . : . : . :
JMFF005G11- GACCAAATATTGTCAAACTCCTTGACATTGTCAGAGATCAGCACTCAAAAACTCCAAGCT
JMFF032P09- GACCAAATATTGTCAAACTCCTTGACATTGTCAGAGATCAGCACTCAAAAACTCCAAGCT
JMSF029B17- GACCAAATATTGTCAAACTCCTTGACATTGTCAGAGATCAGCACTCAAAAACTCCAAGCT
rJMSF039E05+ GACCAAATATTGTCAAACTCCTTGACATTGTCAGAGATCAGCACTCAAAAACTCCAAGCT
____________________________________________________________
consensus GACCAAATATTGTCAAACTCCTTGACATTGTCAGAGATCAGCACTCAAAAACTCCAAGCT
. : . : . : . : . : . :
JMFF005G11- TGATATTTGAGTATGTAAACAGTACAGAT
JMFF032P09- TGATATTTGAGTATGTAAACAGTACAGATTTCAAGGTTTTATACCCCACATTAACAGATT
JMSF029B17- TGATATTTGAGTATGTAAACAGTACAGATTTCAAGGTTTTATACCCCACATTAACAGATT
rJMSF039E05+ TGATATTTGAGTATGTAAACAGTACAGATTTCAAGGTTTTATACCCCACATTAACAGATT
rJMFF032P09+ GATT
____________________________________________________________
consensus TGATATTTGAGTATGTAAACAGTACAGATTTCAAGGTTTTATACCCCACATTAACAGATT
. : . : . : . : . : . :
JMFF032P09- ATGACATACGGTACTACATATATGAGCTTCTCA
JMSF029B17- ATGACATACGGTACTACATATATGAGCTTCTCAAGGCCCTAGACTATTGTCATTCA
rJMSF039E05+ ATGACATACGGTACTACATATATGAGCTTCTCAAGGCCCTAGACTATTGTCATTCACAAG
rJMSF029B17+ CAAG
rJMFF032P09+ ATGACATACGGTACTACATATATGAGCTTCTCAAGGCCNTAGACTATTGTCATTCACAAG
rJMFF005G11+ CAAG
____________________________________________________________
consensus ATGACATACGGTACTACATATATGAGCTTCTCAAGGCCCTAGACTATTGTCATTCACAAG
. : . : . : . : . : . :
rJMSF039E05+ GAATAATGCATAGAGATGTCAAACCTCATAATGTTATGATAGACCATGAGTTGCGGAAAC
rJMSF029B17+ GAATAATGCATAGAGATGTCAANCCTCATAATGTTATGATAGACCATGAGTTGCGGAAAC
rJMFF032P09+ GAATAATGCATAGAGATGTCAAACCTCATAATGTTATGATAGACCATGAGTTGCGGAAAC
rJMFF005G11+ GAATAATGCATAGAGATGTCAAACCTCATAATGTTATGATAGACCATGAGTTGCGGAAAC
____________________________________________________________
consensus GAATAATGCATAGAGATGTCAAACCTCATAATGTTATGATAGACCATGAGTTGCGGAAAC
. : . : . : . : . : . :
rJMSF039E05+ TTCGATTGATAGATTGGGGTCTTGCTGAATTTTATCACCCAGGGAAGGAATATAATGTTC
rJMSF029B17+ TTCGATTGATAGATTGGGGTCTTGCTGAATTTTATCACCCAGGGAAGGAATATAATGTTC
rJMFF032P09+ TTCGATTGATAGATTGGGGTCTTGCTGAATTTTATCACCCAGGGAAGGAATATAATGTTC
rJMFF005G11+ TTCGATTGATAGATTGGGGTCTTGCTGAATTTTATCACCCAGGGAAGGAATATAATGTTC
____________________________________________________________
consensus TTCGATTGATAGATTGGGGTCTTGCTGAATTTTATCACCCAGGGAAGGAATATAATGTTC
. : . : . : . : . : . :
rJMSF039E05+ GTGTGGCTTCAAGATACTTTAAGGGTCCTGAACTTCTTGTTGACTTGCAAGACTATGACT
rJMSF029B17+ GTGTGGCTTCAAGATACTTTAAGGGTCCTGAACTTCTTGTTGACTTGCAAGACTATGACT
rJMFF032P09+ GTGTGGCTTCAAGATACTTTAAGGGTCCTGAACTTCTTGTTGACTTGCAAGACTATGACT
rJMFF005G11+ GTGTGGCTTCAAGATACTTTAAGGGTCCTGAACTTCTTGTTGACTTGCAAGACTATGACT
____________________________________________________________
consensus GTGTGGCTTCAAGATACTTTAAGGGTCCTGAACTTCTTGTTGACTTGCAAGACTATGACT
. : . : . : . : . : . :
rJMSF039E05+ ATTCTTTGGATATGTGGAGCCTTGGCTGCATGTTTGCAGGAATGATTTTCCGCAAGGAAC
rJMSF029B17+ ATTCTTTGGATATGTGGAGCCTTGGCTGCATGTTTGCAGGAATGATTTTCCGCAAGGAAC
rJMFF032P09+ ATTCTTTGGATATGTGGAGCCTTGGCTGCATGTTTGCAGGAATGATTTTCCGCAAGGAAC
rJMFF005G11+ ATTCTTTGGATATGTGGAGCCTTGGCTGCATGTTTGCAGGAATGATTTTCCGCAAGGAAC
____________________________________________________________
consensus ATTCTTTGGATATGTGGAGCCTTGGCTGCATGTTTGCAGGAATGATTTTCCGCAAGGAAC
. : . : . : . : . : . :
rJMSF039E05+ CTTTCTTTTATGGACATGATAATCAAGATCAGCTTGTCAAGATTGCCAAGGTACTTGGGA
JMFS075B05- TCAAGATCAGCTTGTCAAGATTGCCAAGGTACTTGGGA
rJMSF029B17+ CTTTCTTTTATGGACATGATAATCAAGATCAGCTTGTCAAGATTGCCAAGGTACTTGGGA
rJMFF032P09+ CTTTCTTTTATGGACATGATAATCAAGATCAGCTTGTCAAGATTGCCAAGGTACTTGGGA
rJMFF005G11+ CTTTCTTTTATGGACATGATAATCAAGATCAGCTTGTCAAGATTGCCAAGGTACTTGGGA
____________________________________________________________
consensus CTTTCTTTTATGGACATGATAATCAAGATCAGCTTGTCAAGATTGCCAAGGTACTTGGGA
. : . : . : . : . : . :
rJMSF039E05+ CAGATGAGTTGAATGCATATTTGCACAAGTATCGATTAGAGCTTGATCCTCAGCTTGAGG
JMFS075B05- CAGATGAGTTGAATGCATATTTGCACAAGTATCGATTAGAGCTTGATCCTCAGCTTGAGG
rJMSF029B17+ CAGATGAGTTGAATGCATATTTGCACAAGTATCGATTAGAGCTTGATCCTCAGCTTGAGG
rJMFF032P09+ CAGATGAGTTGAATGCATATTTGCACAAGTATCGATTAGAGCTTGATCCTCAGCTTGAGG
rJMFF005G11+ CAGATGAGTTGAATGCATATTTGCACAAGTATCGATTAGAGCTTGATCCTCAGCTTGAGG
____________________________________________________________
consensus CAGATGAGTTGAATGCATATTTGCACAAGTATCGATTAGAGCTTGATCCTCAGCTTGAGG
. : . : . : . : . : . :
rJMSF039E05+ CTATGGTTGGGAGGCACAGCAGAAAGCCGTGGTCCAAGTTTATTAATTCTGATAATCAGC
JMFS075B05- CTATGGTTGGGAGGCACAGCAGAAAGCCGTGGTCCAAGTTTATTAATTCTGATAATCAGC
rJMSF029B17+ CTATGGTTGGGAGGCACAGCAGAAAGCCGTGGTCCAAGTTTATTAATTCTGATAATCAGC
rJMFF032P09+ CTATGGTTGGGAGGCACAGCAGAAAGCCGTGGTCCAAGTTTATTAATTCTGATAATCAGC
rJMFF005G11+ CTATGGTTGGGAGGCACAGCAGAAAGCCGTGGTCCAAGTTTATTAATTCTGATAATCAGC
____________________________________________________________
consensus CTATGGTTGGGAGGCACAGCAGAAAGCCGTGGTCCAAGTTTATTAATTCTGATAATCAGC
. : . : . : . : . : . :
rJMSF039E05+ ATTTAGTGTCACCTGAGGCCATAGATTTTCTCGACAAGCTTCTTCGCTATGATCATCAGG
JMFS075B05- ATTTAGTGTCACCTGAGGCCATAGATTTTCTCGACAAGCTTCTTCGCTATGATCATCAGG
rJMSF029B17+ ATTTAGTGTCACCTGAGGCCATAGATTTTCTCGACAAGCTTCTTCGCTATGATCATCAGG
rJMFF032P09+ ATTTAGTGTCACCTGAGGCCATAGATTTTCTCGACAAGCTTCTTCGCTATGATCATCAGG
rJMFF005G11+ ATTTAGTGTCACCTGAGGCCATAGATTTTCTCGACAAGCTTCTTCGCTATGATCATCAGG
____________________________________________________________
consensus ATTTAGTGTCACCTGAGGCCATAGATTTTCTCGACAAGCTTCTTCGCTATGATCATCAGG
. : . : . : . : . : . :
rJMSF039E05+ ATAGGCTTACAGCAAGAGAAGCAATGGCCCACCCATATTTCTTGCAAGTGAGGGCCGCAG
JMFS075B05- ATAGGCTTACAGCAAGAGAAGCAATGGCCCACCCATATTTCTTGCAAGTGAGGGC
rJMSF029B17+ ATAGGCTTACAGCAAGAGAAGCAATGGCCCACCCATATTTCTTGCAAGTGAGGGCCGCAG
rJMFF032P09+ ATAGGCTTACAGCAAGAGAAGCAATGGCCCACCCATATTTCTTGCAAGTGAGGGCCGCAG
rJMFF005G11+ ATAGGCTTACAGCAAGAGAAGCAATGGCCCACCCATATTTCTTGCAAGTGAGGGCCGCAG
____________________________________________________________
consensus ATAGGCTTACAGCAAGAGAAGCAATGGCCCACCCATATTTCTTGCAAGTGAGGGCCGCAG
. : . : . : . : . : . :
rJMSF039E05+ AGAATAGCAGGATGAGGGTTCAGTGATGTGGTCTTTCGTCATGGTCGTCGGCATCATCAT
rJMSF029B17+ AGAATAGCAGGATGAGGGTTCAGTGATGTGGTCTTTCGTCATGGTCGTCGGCATCATCAT
rJMFF032P09+ AGAATAGCAGGATGAGGGTTCAGTGATGTGGTCTTTCGTCATGGTCGTCGGCATCATCAT
rJMFF005G11+ AGAATAGCAGGATGAGGGTTCAGTGATGTGGTCTTTCGTCATGGTCGTCGGCATCATCAT
____________________________________________________________
consensus AGAATAGCAGGATGAGGGTTCAGTGATGTGGTCTTTCGTCATGGTCGTCGGCATCATCAT
. : . : . : . : . : . :
rJMSF039E05+ AATATAAATTTGCAATTGAATGAACTAGATTTGGGTGGTTTTGAAGTGATGTGAAGTGAC
rJMSF029B17+ AATATAAATTTGCAATTGAATGAACTAGATTTGGGTGGTTTTGAAGTGATGTGAAGTGAC
rJMFF032P09+ AATATAAATTTGCAATTGAATGAACTAGATTTGGGTGGTTTTGAAGTGATGTGAAGTGAC
rJMFF005G11+ AATATAAATTTGCAATTGAATGAACTAGATTTGGGTGGTTTTGAAGTGATGTGAAGTGAC
____________________________________________________________
consensus AATATAAATTTGCAATTGAATGAACTAGATTTGGGTGGTTTTGAAGTGATGTGAAGTGAC
. : . : . : . : . : . :
rJMSF039E05+ ATGTACTATTGGAGAGGTATATTTTAGAC
rJMSF029B17+ ATGTACTATTGGAGAGGTATATTTTAGACATTCTGTATCCA
rJMFF032P09+ ATGTACTATTGGAGAGGTATATTTTAGACATTCTGTATCCATGTT
rJMFF005G11+ ATGTACTATTGGAGAGGTATATTTTAGACATTCTGTATCCATGTTTGAACTCAATAAATT
____________________________________________________________
consensus ATGTACTATTGGAGAGGTATATTTTAGACATTCTGTATCCATGTTTGAACTCAATAAATT