Contig 013608:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004L09Sequence470003065 (3)ref|XP_006360179.1|3e-38PREDICTED: secologanin synthase-like [Solanum tuberosum]757013608 (3)ref|XP_006348902.1|2e-107PREDICTED: 11-oxo-beta-amyrin 30-oxidase-like isoform X2 [Solanum tuberosum]
JMSF027D14Sequence644003065 (3)ref|XP_006348303.1|6e-72PREDICTED: secologanin synthase-like [Solanum tuberosum]814013608 (3)ref|XP_006348902.1|3e-114PREDICTED: 11-oxo-beta-amyrin 30-oxidase-like isoform X2 [Solanum tuberosum]
JMSF048H09Sequence680003065 (3)ref|XP_006360179.1|1e-71PREDICTED: secologanin synthase-like [Solanum tuberosum]744013608 (3)ref|XP_006348902.1|9e-109PREDICTED: 11-oxo-beta-amyrin 30-oxidase-like isoform X2 [Solanum tuberosum]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF027D14+ AAACATGATTTTTTAGGCATAT
                      ____________________________________________________________
consensus AAACATGATTTTTTAGGCATAT
 
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rJMSF027D14+ TACTCGAATCCAACCTGCCAGAAATGAGACATCAGGGGAACAAGGACTGTGGAATGAGCA
rJMSF048H09+ CAGGGGAACAAGGACTGTGGAATGAGCA
rJMFF004L09+ TGGAATGAGCA
                      ____________________________________________________________
consensus TACTCGAATCCAACCTGCCAGAAATGAGACATCAGGGGAACAAGGACTGTGGAATGAGCA
 
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rJMSF027D14+ TCGAACAGATTATCGACGAGTGCATGCTGTTCTATTTCGCGGGGCAGGAGACTACTTCCG
rJMSF048H09+ TCGAACAGATTATCGACGAGTGCATGCTGTTCTATTTCGCGGGGCAGGAGACTACTTCCG
rJMFF004L09+ TCGAACAGATTATCGACGAGTGCATGCTGTTCTATTTCGCGGGGCAGGAGACTACTTCCG
                      ____________________________________________________________
consensus TCGAACAGATTATCGACGAGTGCATGCTGTTCTATTTCGCGGGGCAGGAGACTACTTCCG
 
. : . : . : . : . : . :
rJMSF027D14+ CGATGCTGGTGTGGACTATGATTCTACTCAGCAGATCTCGGGATTGGCAAGCTCGAGCTA
rJMSF048H09+ CGATGCTGGTGTGGACTATGATTCTACTCAGCAGATTTCGGGATTGGCAAGCTCGAGCTA
rJMFF004L09+ CGATGCTGGTGTGGACTATGATTCTACTCAGCAGATTTCGGGATTGGCAAGCTCGAGCTA
                      ____________________________________________________________
consensus CGATGCTGGTGTGGACTATGATTCTACTCAGCAGATTTCGGGATTGGCAAGCTCGAGCTA
 
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rJMSF027D14+ GGAAAGAGGTGTTGCAGGTTTTCGGGGATAAGGAGCCAGACTTTGAAGGCTTGAATAGCC
rJMSF048H09+ GGAAAGAGGTGTTGCAGGTTTTCGGGGATAAGGAGCCAGACTTTGAAGGCTTGAATAGCC
rJMFF004L09+ GGAAAGAGGTGTTGCAGGTTTTCGGGGATAAGGAGCCAGACTTTGAAGGCTTGAATAGCC
                      ____________________________________________________________
consensus GGAAAGAGGTGTTGCAGGTTTTCGGGGATAAGGAGCCAGACTTTGAAGGCTTGAATAGCC
 
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rJMSF027D14+ TTAAAGTTGTGACAATGATTTTGTACGAGTCTTTAAGGCTATACCCGCCAGTATCTAGAC
rJMSF048H09+ TTAAAGTTGTGACAATGATTTTGTACGAGTCTTTAAGGCTATACCCGCCAGTATCTAGAC
rJMFF004L09+ TTAAAGTTGTGACAATGATTTTGTACGAGTCTTTAAGGCTATACCCGCCAGTATCTAGAC
                      ____________________________________________________________
consensus TTAAAGTTGTGACAATGATTTTGTACGAGTCTTTAAGGCTATACCCGCCAGTATCTAGAC
 
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rJMSF027D14+ TAGTTAGGAGGACCATAGAGGAAACGAAGCTAGGAGAAATGGTTCTGCCATCGGGAGTAG
rJMSF048H09+ TAGTTAGGAGGACCATAGAGGAAACGAAGCTAGGAGAAATGGTTCTGCCATCGGGAGTAG
rJMFF004L09+ TAGTTAGGAGGACCATAGAGGAAACGAAGCTAGGAGAAATGGTTCTGCCATCGGGAGTAG
                      ____________________________________________________________
consensus TAGTTAGGAGGACCATAGAGGAAACGAAGCTAGGAGAAATGGTTCTGCCATCGGGAGTAG
 
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rJMSF027D14+ TGCTGACATTACCAATAGTCTTGATGCATCTCGACACCGAAATATGGGGCGAAGATGCTA
rJMSF048H09+ TGCTGACATTACCAATAGTCTTGATGCATCTCGACACCGAAATATGGGGCGAAGATGCTA
rJMFF004L09+ TGCTGACATTACCAATAGTCTTGATGCATCTCGACACCGAAATATGGGGCGAAGATGCTA
                      ____________________________________________________________
consensus TGCTGACATTACCAATAGTCTTGATGCATCTCGACACCGAAATATGGGGCGAAGATGCTA
 
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rJMSF027D14+ AAGAGTTCAACCCCGAGAGGTTCAGCGAAGGGATAATGAAGGCAACGACAAATGGGAAAC
rJMSF048H09+ AAGAGTTCAACCCCGAGAGGTTCAGCGAAGGGATAATGAAGGCAACGACAAATGGGAAAC
rJMFF004L09+ AAGAGTTCAACCCCGAGAGGTTCAGCGAAGGGATAATGAAGGCAACGACAAATGGGAAAC
                      ____________________________________________________________
consensus AAGAGTTCAACCCCGAGAGGTTCAGCGAAGGGATAATGAAGGCAACGACAAATGGGAAAC
 
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rJMSF027D14+ AAGCATTCTTCCCGTTTGGCTGGGGACCTCGAATATGCGTTGGTCAAAACTTTGCTTTGG
rJMSF048H09+ AAGCATTCTTCCCGTTTGGCTGGGGACCTCGAATATGCGTTGGTCAAAACTTTGCTTTGG
rJMFF004L09+ AAGCATTCTTCCCGTTTGGCTGGGGACCTCGAATATGCGTTGGTCAAAACTTTGCTTTGG
                      ____________________________________________________________
consensus AAGCATTCTTCCCGTTTGGCTGGGGACCTCGAATATGCGTTGGTCAAAACTTTGCTTTGG
 
. : . : . : . : . : . :
rJMSF027D14+ TAGAAGCTAAAATGGCAATGGCTATGATTCTGCAACGCTTCTCGTTTGAGCTTTCTCCTT
rJMSF048H09+ TAGAAGCTAAAATGGCAATGGCTATGATTCTGCAACGCTTCTCGTTTGAGCTTTCTCCTT
rJMFF004L09+ TAGAAGCTAAAATGGCAATGGCTATGATTCTGCAACGCTTCTCGTTTGAGCTTTCTCCTT
                      ____________________________________________________________
consensus TAGAAGCTAAAATGGCAATGGCTATGATTCTGCAACGCTTCTCGTTTGAGCTTTCTCCTT
 
. : . : . : . : . : . :
rJMSF027D14+ CGTATGCACATGCTCCATATCCAAGGGTGACCACTCAACCTCAGTTTGGTGTTCCTCTAA
rJMSF048H09+ CGTATGCACATGCTCCATATCCAAGGGTGACCACTCAACCTCAGTTTGGTGCTCCTCTAA
rJMFF004L09+ CGTATGCACATGCTCCATATCCAAGGGTGACCACTCAACCTCAGTTTGGTGCTCCTCTAA
                      ____________________________________________________________
consensus CGTATGCACATGCTCCATATCCAAGGGTGACCACTCAACCTCAGTTTGGTGCTCCTCTAA
 
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rJMSF027D14+ TTATGCACAAGCTTTAAT
rJMSF048H09+ TTATGCACAAGCTTTAATATATATGCTTCTTCCCAGTTCTTAGAAATCCACCAATATGTA
rJMFF004L09+ TTATGCACAAGCTTTAATATATATGCTTCTTCNCAGTTCTTAGAAATCCACCAATATGTA
                      ____________________________________________________________
consensus TTATGCACAAGCTTTAATATATATGCTTCTTCCCAGTTCTTAGAAATCCACCAATATGTA
 
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rJMSF048H09+ GGCTTGAACCAAATTTCTATATGTTTTGTACTATGG
rJMFF004L09+ GGCTTGAACCAAATTTCTATATGTTTTGTACTATGGGAAGTTTACTGCAGACTGAAAGAC
                      ____________________________________________________________
consensus GGCTTGAACCAAATTTCTATATGTTTTGTACTATGGGAAGTTTACTGCAGACTGAAAGAC