| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF004F15 | Sequence | 767 | 013605 (5) | ref|NP_001265891.1| | 5e-79 | CBL-interacting protein kinase 6 [Solanum lycopersicum] gb|AEP33595.1| CBL-inter | |||||
| JMFF012G02 | Sequence | 440 | 011899 (4) | ref|XP_011079428.1| | 6e-18 | PREDICTED: CBL-interacting serine/threonine-protein kinase 6-like [Sesamum indi | 616 | 013605 (5) | ref|NP_001265891.1| | 2e-61 | CBL-interacting protein kinase 6 [Solanum lycopersicum] gb|AEP33595.1| CBL-inter |
| JMSF005K04 | Sequence | 345 | 011899 (4) | 393 | 013605 (5) | ref|XP_011079428.1| | 3e-22 | PREDICTED: CBL-interacting serine/threonine-protein kinase 6-like [Sesamum indi | |||
| JMSF015F08 | Sequence | 273 | 011899 (4) | 751 | 013605 (5) | ref|NP_001265891.1| | 6e-78 | CBL-interacting protein kinase 6 [Solanum lycopersicum] gb|AEP33595.1| CBL-inter | |||
| JMSF038N22 | Sequence | 626 | 011899 (4) | ref|XP_011079428.1| | 8e-63 | PREDICTED: CBL-interacting serine/threonine-protein kinase 6-like [Sesamum indi | 872 | 013605 (5) | emb|CDP10216.1| | 3e-74 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
rJMSF038N22+ CCAAGATG
____________________________________________________________
consensus CCAAGATG
. : . : . : . : . : . :
rJMSF038N22+ AAAAACGTGGTAGCCCATGTACCGGAAAATTTNCCAGGGGGGATTTCAAATGCCCCGCCC
____________________________________________________________
consensus AAAAACGTGGTAGCCCATGTACCGGAAAATTTNCCAGGGGGGATTTCAAATGCCCCGCCC
. : . : . : . : . : . :
rJMSF015F08+ AATTCG
rJMSF038N22+ TGGTTTTCATCAGACGCTAGGAAATTGATCACCAAGATGCTGGATCCGAATCCGAATTCG
____________________________________________________________
consensus TGGTTTTCATCAGACGCTAGGAAATTGATCACCAAGATGCTGGATCCGAATCCGAATTCG
. : . : . : . : . : . :
rJMSF015F08+ AGNATCTCCATTTCCAAGATTATGGATTCTCCCTGGTTCAAGAAATCTGTCCCCAGGGCT
rJMSF038N22+ AGAATCTCCATTTCCAAGATTATGGATTCTCCCTGGTTCAAGAAATCTGTCCCCAGGGCT
rJMFF004F15+ TCCAAGATTATGGATTCTCCCTGGTTCAAGAAATCTGTCCCCAGGGCT
____________________________________________________________
consensus AGAATCTCCATTTCCAAGATTATGGATTCTCCCTGGTTCAAGAAATCTGTCCCCAGGGCT
. : . : . : . : . : . :
rJMSF015F08+ TTAAGGAGCAAGGAAGAGGAAGAGTTTACTGTGGAAGATGAAGGTTGTTTGGGGAAAACT
rJMSF038N22+ TTAAGGAGCAAGGAAGAGGAAGAGTTTACTGTGGAAGATGAAGGTTGTTTGGGGAAAACT
rJMFF012G02+ AACT
rJMFF004F15+ TTAAGGAGCAAGGAAGAGGAAGAGTTTACTGTGGAAGATGAAGGTTGTTTGGGGAAAACT
____________________________________________________________
consensus TTAAGGAGCAAGGAAGAGGAAGAGTTTACTGTGGAAGATGAAGGTTGTTTGGGGAAAACT
. : . : . : . : . : . :
rJMSF015F08+ AAGGAAATGGAATCCTTGAANGCTTTCCATATCATCTCCTTGTCTCAGGGGTTCGATCTG
rJMSF038N22+ AAGGAAATGGAATCCTTGAATGCTTTCCATATCATCTCCTTGTCTCAGGGGTTCGATCTG
rJMFF012G02+ AAGGAAATGGAATCCTTGAATGCTTTCCATATCATCTCCTTGTCTCAGGGGTTCGATCTG
rJMFF004F15+ AAGGAAATGGAATCCTTGAATGCTTTCCATATCATCTCCTTGTCTCAGGGGTTCGATCTG
____________________________________________________________
consensus AAGGAAATGGAATCCTTGAATGCTTTCCATATCATCTCCTTGTCTCAGGGGTTCGATCTG
. : . : . : . : . : . :
rJMSF015F08+ AGCCCGCTGTTTGAGGAGAAGAAGAAGAAGATGGAGAAGGAGGATCTAAGATTCGCCACT
rJMSF038N22+ AGCCCGCTGTTTGAGGAGAAGAAGAAGAAGATGGAGAAGGAGGATCTAAGATTCGCCACT
rJMFF012G02+ AGCCCGCTGTTTGAGGAGAAGAAGAAGAAGATGGAGAAGGAGGATCTAAGATTCGCCACT
rJMFF004F15+ AGCCCGCTGTTTGAGGAGAAGAAGAAGAAGATGGAGAAGGAGGATCTAAGATTCGCCACT
____________________________________________________________
consensus AGCCCGCTGTTTGAGGAGAAGAAGAAGAAGATGGAGAAGGAGGATCTAAGATTCGCCACT
. : . : . : . : . : . :
rJMSF015F08+ ACTAAGCCCGCTAGCAGTGTGATTTCCAGGCTTGAAGAACTGGCAAAAACAAGTAATTTT
rJMSF038N22+ ACTAAGCCCGCTAGCAGTGTGATTTCCAGGCTTGAAGAACTGGC-AAAACAAGTAATTTT
rJMFF012G02+ ACTAAGCCCGCTAGCAGTGTGATTTCCAGGCTTGAAGAACTGGCAAAAACAAGTAATTTT
rJMFF004F15+ ACTAAGCCCGCTAGCAGTGTGATTTCCAGGCTTGAAGAACTGGCAAAAACAAGTAATTTT
____________________________________________________________
consensus ACTAAGCCCGCTAGCAGTGTGATTTCCAGGCTTGAAGAACTGGCAAAAACAAGTAATTTT
. : . : . : . : . : . :
rJMSF015F08+ AGCATAAAGAAGAGTGATTCTAGTGTTAGGTTGCAGGGTCAAGAGAGTGGGAGGAAAGGG
rJMSF038N22+ AGCATAAAGAAGAGTGATTCTAGTGTTAGGTTGCAGGGTCAAGAGAGTGGGAGGAAAGGG
rJMFF012G02+ AGCATAAAGAAGAGTGATTCTAGTGTTAGGTTGCAGGGTCAAGAGAGTGGGAGGAAAGGG
rJMSF005K04+ AAAGGG
rJMFF004F15+ AGCATAAAGAAGAGTGATTCTAGTGTTAGGTTGCAGGGTCAAGAGAGTGGGAGGAAAGGG
____________________________________________________________
consensus AGCATAAAGAAGAGTGATTCTAGTGTTAGGTTGCAGGGTCAAGAGAGTGGGAGGAAAGGG
. : . : . : . : . : . :
rJMSF015F08+ AAGCTTGGAATTTCTGCAGATNTATTTGCCTTCTCTCCTTCATTCTTAGTTGTGGAGGTG
rJMSF038N22+ AAGCTTGGAATTTCTGCAGATTTATTTGCCTTCTCTCCTTCATTCTTAGTTGTGGAGGTG
rJMFF012G02+ AAGCTTGGAATTTCTGCAGATTTATTTGCCTTCTCTCCTTCATTCTTAGTTGTGGAGGTG
rJMSF005K04+ AAGCTTGGAATTTCTGCAGATTTATTTGCCTTCTCTCCNTCATTCTTAGTTGTGGAGGTG
rJMFF004F15+ AAGCTTGGAATTTCTGCAGATTTATTTGCCTTCTCTCCTTCATTCTTAGTTGTGGAGGTG
____________________________________________________________
consensus AAGCTTGGAATTTCTGCAGATTTATTTGCCTTCTCTCCTTCATTCTTAGTTGTGGAGGTG
. : . : . : . : . : . :
rJMSF015F08+ AAGAAGGCTAGNGGCGATACTCTCGAATACAATCAGTTCTGCAGCAAAGAGCTTAGACCA
rJMSF038N22+ AAGAAGGCTAGTGGCGATACTCTCGAATACAATCAGTTCTGCAGCAAAGAGCTTAGACCA
rJMFF012G02+ AAGAAGGCTAGTGGCGATACTCTCGAATACAATCAGTTCTGCAGCAAAGAGCTTAGACCA
rJMSF005K04+ AAGAAGGCTAGTGGCGATACTCTCGAATACAATCAGTTCTGCAGCAAAGAGCTTAGACCA
rJMFF004F15+ AAGAAGGCTAGTGGCGATACTCTCGAATACAATCAGTTCTGCAGCAAAGAGCTTAGACCA
____________________________________________________________
consensus AAGAAGGCTAGTGGCGATACTCTCGAATACAATCAGTTCTGCAGCAAAGAGCTTAGACCA
. : . : . : . : . : . :
rJMSF015F08+ GCGCTTAAGGACATCGTTTGGACCTCTCCCTCTACTTGAGTAAATACTAGTTATGGCTCC
rJMSF038N22+ GCGCTTAAGGACATCGTTTGGACCTCTCCCTCTACTTGAGTAAATACTAGTTATGGCTCC
rJMFF012G02+ GCGCTTAAGGACATCGTTTGGACCTCTCCCTCTACTTGAGTAAATACTAGTTATGGCTCC
rJMSF005K04+ GCGCTTAAGGACATCGTTTGGACCTCTCCCTCTACTTGAGTAAATACTGGTTATGGCTCC
rJMFF004F15+ GCGCTTAAGGACATCGTTTGGACCTCTCCCTCTACTTGAGTAAATACTAGTTATGGCTCC
____________________________________________________________
consensus GCGCTTAAGGACATCGTTTGGACCTCTCCCTCTACTTGAGTAAATACTAGTTATGGCTCC
. : . : . : . : . : . :
rJMSF015F08+ GAATCTCAGGTGTGGATTCAAGGTTCTTGCTTTGCAGGATGAANTTAGATNGTCTGCTTC
rJMSF038N22+ GAATCTCAGGTGTGGATTCAAGGTTCTTGCTTTGCAGGATGAATTTAGATTGTCTGCTTC
rJMFF012G02+ GAATCTCAGGTGTGGATTCAAGGTTCTTGCTTTGCAGGATGAATTTAGATTGTCTGCTTC
rJMSF005K04+ GAATCTCAGGTGTGGATTCAAGGTTCTTGCTNTGCAGGATGAATTTAGATTGTCTGCTTC
rJMFF004F15+ GAATCTCAGGTGTGGATTCAAGGTTCTTGCTTTGCAGGATGAATTTAGATTGTCTGCTTC
____________________________________________________________
consensus GAATCTCAGGTGTGGATTCAAGGTTCTTGCTTTGCAGGATGAATTTAGATTGTCTGCTTC
. : . : . : . : . : . :
rJMSF015F08+ TAGTTTTACTCTTTTTTAGTTGAAATGAATTGGTATGTATCAAATGTGAATCAGTTTAGG
rJMSF038N22+ TAGTTTTACTCTTTTTTAGTTGAAATGAATTGGTATGTATCAAATGTGAATCAGTTTAGG
rJMFF012G02+ TAGTTTTACTCTTTTTTAGTTGAAATGAATTGGTATGTATCAAATGTGAATCAGTTTAGG
rJMSF005K04+ TAGTTTTACTCTTTTTTAGTTGAAATGAATTGGTATGTATCAAATGTGAATCAGTTTAGG
rJMFF004F15+ TAGTTTTACTCTTTTTTAGTTGAAATGAATTGGTATGTATCAAATGTGAATCAGTTTAGG
____________________________________________________________
consensus TAGTTTTACTCTTTTTTAGTTGAAATGAATTGGTATGTATCAAATGTGAATCAGTTTAGG
. : . : . : . : . : . :
rJMSF015F08+ CTTATTCTTGATCCCATTAGCTTTTCTTGTGCCCATCCANTGCAGTNTGC-AAACTNGTA
rJMSF038N22+ CTTATTCTTGATCCCATTAGCTTTTCTTGTGCCCATCCATTGCAGTTTGC-AAACTTGTA
rJMFF012G02+ CTTATTCTTGATCCCATTAGCTTTTCTTGTGCCCATCCATTGCAGTTTGC-AAACTTGTA
rJMSF005K04+ CTTATTCTTGATCCCATTAGCTTTTCTTGTGCCCATCCATTGCAGTTTGCAAAACTTGTA
rJMFF004F15+ CTTATTCTTGATCCCATTAGCTTTTCTTGTGCCCATCCATTGCAGTTTGC-AAACTTGTA
____________________________________________________________
consensus CTTATTCTTGATCCCATTAGCTTTTCTTGTGCCCATCCATTGCAGTTTGC-AAACTTGTA
. : . : . : . : . : . :
rJMSF015F08+ GGTTTGTANTGGTGTGATTTGTGTAT
rJMSF038N22+ GGTTTGTATTGGTGTGATTTGTGTAT
rJMFF012G02+ GGTTTGTATTGGT
rJMSF005K04+ GGTTTGTATTGGTGTGATTTGTGTAT
rJMFF004F15+ GGTTTGTATTGGTGTGATTTGTGTATTGTGGACATGAACACTATTGTTGTGAATCAAATC
____________________________________________________________
consensus GGTTTGTATTGGTGTGATTTGTGTATTGTGGACATGAACACTATTGTTGTGAATCAAATC