Contig 013604:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF004A02Sequence244005985 (2)gb|AHL24656.1|2e-20Ole e 13.01 allergen, partial [Olea europaea]748013604 (2)ref|XP_009597284.1|1e-82PREDICTED: exopolygalacturonase clone GBGE184-like [Nicotiana tomentosiformis]
JMFF026N22Sequence562005985 (2)ref|XP_009771846.1|1e-49PREDICTED: exopolygalacturonase clone GBGE184 [Nicotiana sylvestris]739013604 (2)ref|XP_009771846.1|2e-63PREDICTED: exopolygalacturonase clone GBGE184 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMFF026N22+                                            GGAGACAGCCCAAACACCGACGGCAT
rJMFF004A02+                                         CCCGGAGACAGCCCAAACACCGACGGCAT
                      ____________________________________________________________
consensus                                            CCCGGAGACAGCCCAAACACCGACGGCAT
 
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rJMFF026N22+          CCACATTAGCGGATCTACCAACGTTAATGTTACTGATCTTGTGGTGGGAACGGGTGATGA
rJMFF004A02+          CCACATTAGCGGATCTACCAACGTTAATGTTACTGATCTTGTGGTGGGAACGGGTGATGA
                      ____________________________________________________________
consensus             CCACATTAGCGGATCTACCAACGTTAATGTTACTGATCTTGTGGTGGGAACGGGTGATGA
 
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rJMFF026N22+          CTGCGTTTCCCATTGGCGATGGCACCACCAATCTTCTTGTCACTAGGGTCACTTGTGGCC
rJMFF004A02+          CTGCGTTT-CCATTGGCGATGGCACCACCAATCTTCTTGTCACTAGGGTCACTTGTGGCC
                      ____________________________________________________________
consensus             CTGCGTTTCCCATTGGCGATGGCACCACCAATCTTCTTGTCACTAGGGTCACTTGTGGCC
 
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rJMFF026N22+          CTGGACATGGCATCAGTATTGGAAGCCTTGGGAAGCGGGCACAAGAAACTGACGTGAAAG
rJMFF004A02+          CTGGACATGGCATCAGTATTGGAAGCCTTGGGAAGCGGGCACAAGAAACTGACGTGAAAG
                      ____________________________________________________________
consensus             CTGGACATGGCATCAGTATTGGAAGCCTTGGGAAGCGGGCACAAGAAACTGACGTGAAAG
 
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rJMFF026N22+          GAGTAACGGTGAGAAATTGCACACTAATAGGCACCACAAATGGGGCAAGAATCAAGACGT
rJMFF004A02+          GAGTAACGGTGAGAAATTGCACACTAATAGGCACCACAAATGGGGCAAGAATCAAGACGT
                      ____________________________________________________________
consensus             GAGTAACGGTGAGAAATTGCACACTAATAGGCACCACAAATGGGGCAAGAATCAAGACGT
 
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rJMFF026N22+          ATCGTGCATCGCCACAGCTCAAGGCTTCTGGCATTATTTTTGAAGATATAATGTTGCACA
rJMFF004A02+          ATCGTGCATCGCCACAGCTCAAGGCTTCTGGCATTATTTTTGAAGATATAATGTTGCACA
                      ____________________________________________________________
consensus             ATCGTGCATCGCCACAGCTCAAGGCTTCTGGCATTATTTTTGAAGATATAATGTTGCACA
 
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rJMFF026N22+          ATGTTACTCGTCCCATCATTATCGATCAAGACTACAACTCCAAAAACCGAAAAGAGGCAT
rJMFF004A02+          ATGTTACTCGTCCCATCATTATCGATCAAGACTACAACTCCAAAAACCGAAAAGAGGCAT
                      ____________________________________________________________
consensus             ATGTTACTCGTCCCATCATTATCGATCAAGACTACAACTCCAAAAACCGAAAAGAGGCAT
 
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rJMFF026N22+          CGAAGGTGAAGCTGAAAGATGTCCGTTTCCGCAACATAAGAGGAACGGCGTCTAAGAAAC
rJMFF004A02+          CGAAGGTGAAGCTGAAAGATGTCCGTTTCCGCAACATAAGAGGAACGGCGTCTAAGAAAC
                      ____________________________________________________________
consensus             CGAAGGTGAAGCTGAAAGATGTCCGTTTCCGCAACATAAGAGGAACGGCGTCTAAGAAAC
 
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rJMFF026N22+          ATCCGGCGATCTCCCTCATTTGCAGCCAAACAGTTCCCTGTGAAGACGTAGAATTGGCGG
rJMFF004A02+          ATCCGGCGATCTCCCTCATTTGCAGCCAAACAGTTCCCTGTGAAGACGTAGAATTGGCGG
                      ____________________________________________________________
consensus             ATCCGGCGATCTCCCTCATTTGCAGCCAAACAGTTCCCTGTGAAGACGTAGAATTGGCGG
 
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rJMFF026N22+          ACATTGATATTGTATCGGCGGCGGGTAAGGGCGTCCACCTTAAACCAAACAAATGCGTCA
rJMFF004A02+          ACATTGATATTGTATCGGCGGCGGGTAAGGGCGTCCACCTTAAACCAAACAAATGCGTCA
                      ____________________________________________________________
consensus             ACATTGATATTGTATCGGCGGCGGGTAAGGGCGTCCACCTTAAACCAAACAAATGCGTCA
 
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rJMFF026N22+          ATGCCGAAACAATTGTAAAGGGGAAACGAAACCCAGGTGGTTCCTGCGGCTAGCTAGCTA
rJMFF004A02+          ATGCCGAAACAATTGTAAAGGGGAAACGAAACCCAGGTGGTTCCTGCGGCTAGCTAGCTA
                      ____________________________________________________________
consensus             ATGCCGAAACAATTGTAAAGGGGAAACGAAACCCAGGTGGTTCCTGCGGCTAGCTAGCTA
 
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rJMFF026N22+          GATTCTGTCATGTACTGTAACACCACGCTCCGATCCATCTATCCCTATCCATATATCCTT
rJMFF004A02+          GATTCTGTCATGTACTGTAACACCACGCTCCGATCCATCTATCCCTATCCATATATCCTT
                      ____________________________________________________________
consensus             GATTCTGTCATGTACTGTAACACCACGCTCCGATCCATCTATCCCTATCCATATATCCTT
 
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rJMFF026N22+          ACTCGGGGAGCCCGGAAGAAAGGGGTTGCCGCCCCTCCAATTATTTGTA           
rJMFF004A02+          ACTCGGGGAGCCCGGAAGAAAGGGGTTGCCGCCCCTCCAATTATTTGTATGAATATATAT
                      ____________________________________________________________
consensus             ACTCGGGGAGCCCGGAAGAAAGGGGTTGCCGCCCCTCCAATTATTTGTATGAATATATAT