Contig 013599:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003H01Sequence495004486 (7)gb|KDO78340.1|1e-12hypothetical protein CISIN_1g004125mg [Citrus sinensis] gb|KDO78341.1| hypotheti507013599 (7)
JMFF010D16Sequence492004486 (7)gb|KDO78340.1|2e-12hypothetical protein CISIN_1g004125mg [Citrus sinensis] gb|KDO78341.1| hypotheti750013599 (7)gb|ABK96436.1|9e-82unknown [Populus trichocarpa x Populus deltoides]
JMFS096B03Sequence610013599 (7)ref|XP_004145433.1|8e-100PREDICTED: uncharacterized membrane protein C2G11.09-like [Cucumis sativus] gb|
JMSF009F21Sequence409004486 (7)690013599 (7)ref|XP_007141612.1|1e-65hypothetical protein PHAVU_008G210700g [Phaseolus vulgaris] gb|ESW13606.1| hypot
JMSF011A23Sequence275004486 (7)679013599 (7)gb|ABK96436.1|1e-75unknown [Populus trichocarpa x Populus deltoides]
JMSF031J09Sequence621009419 (3)ref|XP_011086200.1|7e-23PREDICTED: calcium permeable stress-gated cation channel 1-like [Sesamum indicu694013599 (7)gb|ABK96436.1|1e-72unknown [Populus trichocarpa x Populus deltoides]
JMSF045E01Sequence739009419 (3)ref|XP_011086200.1|1e-49PREDICTED: calcium permeable stress-gated cation channel 1-like [Sesamum indicu707013599 (7)gb|ABK96436.1|2e-75unknown [Populus trichocarpa x Populus deltoides]

Alignment

This contig is upended


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JMFS096B03-                                             AGCGACTTTTTTCATCGGGATCGCAG
                      ____________________________________________________________
consensus                                               AGCGACTTTTTTCATCGGGATCGCAG
 
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JMFS096B03-           CACCAATGGTTTTAGGGATCTCGTCTGCGGATTGATGGATGAAAGCGACTTTTTTCATAA
                      ____________________________________________________________
consensus             CACCAATGGTTTTAGGGATCTCGTCTGCGGATTGATGGATGAAAGCGACTTTTTTCATAA
 
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JMFS096B03-           CCTATATAATGGTTGACGGGTGGACTGGAATTGCCGGGGAGGTCTTGAGGTTGAAAGCGT
                      ____________________________________________________________
consensus             CCTATATAATGGTTGACGGGTGGACTGGAATTGCCGGGGAGGTCTTGAGGTTGAAAGCGT
 
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JMFS096B03-           TGATACTCTTCCATCTGAAGAATAGTTTTTTGGTTAAGACCGAAAAGGATCGGGAGGATG
                      ____________________________________________________________
consensus             TGATACTCTTCCATCTGAAGAATAGTTTTTTGGTTAAGACCGAAAAGGATCGGGAGGATG
 
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JMFS096B03-           CGATGAATCCCGGGAGCCTTTGTTTCAATTTTAACGAACCTCGAATACAATTATACTTCC
                      ____________________________________________________________
consensus             CGATGAATCCCGGGAGCCTTTGTTTCAATTTTAACGAACCTCGAATACAATTATACTTCC
 
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JMFS096B03-           TATTAGGCCTCGTCTATGCTGCTGTCACGCCTATCCTTCTTCCCTTCATTCTCGTATTCT
rJMSF045E01+                                                      TTCATTCTCGTATTCT
rJMSF031J09+                                                                   TCT
rJMSF011A23+                                                      TTCATTCTCGTATTCT
rJMFF010D16+                        TATGCTGCTGTCACGCCTATCCTTCTTCCCTTCATTCTCGTATTCT
                      ____________________________________________________________
consensus             TATTAGGCCTCGTCTATGCTGCTGTCACGCCTATCCTTCTTCCCTTCATTCTCGTATTCT
 
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JMFS096B03-           TTGCCTTCGCATACGTCGTGTTTCGGCATCAGATTATAAATGTATACAACCAAGAGTATG
rJMSF045E01+          TTGCCTTCGCATACGTCGTGTTTCGGCATCAGATTATAAATGTATACAACCAAGAGTATG
rJMSF031J09+          TTGCCTTCGCATACGTCGTGTTTCGGCATCAGATTATAAATGTATACAACCAAGAGTATG
rJMSF011A23+          TTGCCTTCGCATACGTCGTGTTTCGGCATCAGATTATAAATGTATACAACCAAGAGTATG
rJMSF009F21+                                       CAGATTATAAATGTATACAACCAAGAGTATG
rJMFF010D16+          TTGCCTTCGCATACGTCGTGTTTCGGCATCAGATTATAAATGTATACAACCAAGAGTATG
                      ____________________________________________________________
consensus             TTGCCTTCGCATACGTCGTGTTTCGGCATCAGATTATAAATGTATACAACCAAGAGTATG
 
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JMFS096B03-           AAAGTGCGGCAGCGTTCTGGCCTGATGTCCACGGAAGGATCATATTCGCGTTAATCTTCT
rJMSF045E01+          AAAGTGCGGCAGCGTTCTGGCCTGATGTCCACGGAAGGATCATATTCGCGTTAATCTTCT
rJMSF031J09+          AAAGTGCGGCAGCGTTCTGGCCTGATGTCCACGGAAGGATCATATTCGCGTTAATCTTCT
rJMSF011A23+          AAAGTGCGGCAGCGTTCTGGCCTGATGTCCACGGAAGGATCATATTCGCGTTAATCTTCT
rJMSF009F21+          AAAGTGCGGCAGCGTTCTGGCCTGATGTCCACGGAAGGATCATATTCGCGTTAATCTTCT
rJMFF010D16+          AAAGTGCGGCAGCGTTCTGGCCTGATGTCCACGGAAGGATCATATTCGCGTTAATCTTCT
                      ____________________________________________________________
consensus             AAAGTGCGGCAGCGTTCTGGCCTGATGTCCACGGAAGGATCATATTCGCGTTAATCTTCT
 
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JMFS096B03-           CGCAGGTCTCGACATTGGGATTGTTAAGCACAAAACACGCTGCTCAGTCTGCTCCATTCC
rJMSF045E01+          CGCAGGTCTCGACATTGGGATTGTTAAGCACAAAACACGCTGCTCAGTCTGCTCCATTCC
rJMSF031J09+          CGCAGGTCTCGACATTGGGATTGTTAAGCACAAAACACGCTGCTCAGTCTGCTCCATTCC
rJMSF011A23+          CGCAGGTCTCGACATTGGGATTGTTAAGCACAAAACACGCTGCTCAGTCTGCTCCATTCC
rJMSF009F21+          CGCAGGTCTCGACATTGGGATTGTTAAGCACAAAACACGCTGCTCAGTCTGCTCCATTCC
rJMFF010D16+          CGCAGGTCTCGACATTGGGATTGTTAAGCACAAAACACGCTGCTCAGTCTGCTCCATTCC
                      ____________________________________________________________
consensus             CGCAGGTCTCGACATTGGGATTGTTAAGCACAAAACACGCTGCTCAGTCTGCTCCATTCC
 
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JMFS096B03-           TCATCGTCCTTCCGGTATTAACCATCACGTTCCATTTGTACTGCAAAGGGCGCTACGAAT
rJMSF045E01+          TCATCGTCCTTCCGGTATTAACCATCACGTTCCATTTGTACTGCAAAGGGCGCTACGAAT
rJMSF031J09+          TCATCGTCCTTCCGGTATTAACCATCACGTTCCATTTGTACTGCAAAGGGCGCTACGAAT
rJMSF011A23+          TCATCGTCCTTCCGGTATTAACCATCACGTTCCATTTGTACTGCAAAGGGCGCTACGAAT
rJMSF009F21+          TCATCGTCCTTCCGGTATTAACCATCACGTTCCATTTGTACTGCAAAGGGCGCTACGAAT
rJMFF010D16+          TCATCGTCCTTCCGGTATTAACCATCACGTTCCATTTGTACTGCAAAGGGCGCTACGAAT
                      ____________________________________________________________
consensus             TCATCGTCCTTCCGGTATTAACCATCACGTTCCATTTGTACTGCAAAGGGCGCTACGAAT
 
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JMFS096B03-           CTGCTTTTACCAAACATCCACTACAGGAAGCCAAGATGAAAGAC                
rJMSF045E01+          CTGCTTTTACCAAACATCCACTACAGGAAGCCAAGATGAAAGACACTTTAGAACAAGCAA
rJMSF031J09+          CTGCTTTTACCAAACATCCACTACAGGAAGCCAAGATGAAAGACACTTTAGAACAAGCAA
rJMSF011A23+          CTGCTTTTACCAAACATCCACTACAGGAAGCCAAGATGAAAGACACTTTAGAACAAGCAA
rJMSF009F21+          CTGCTTTTACCAAACATCCACTACAGGAAGCCAAGATGAAAGACACTTTAGAACAAGCAA
rJMFF010D16+          CTGCTTTTACCAAACATCCACTACAGGAAGCCAAGATGAAAGACACTTTAGAACAAGCAA
                      ____________________________________________________________
consensus             CTGCTTTTACCAAACATCCACTACAGGAAGCCAAGATGAAAGACACTTTAGAACAAGCAA
 
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rJMSF045E01+          GGGAACCGAACTTCAACCTAAAACCGTACCTTCAAGACGCATATATCCATCCCGTTTTCA
rJMSF031J09+          GGGAACCGAACTTCAACCTAAAACCGTACCTTCAAGACGCATATATCCATCCCGTTTTCA
rJMSF011A23+          GGGAACCGAACTTCAACCTAAAACCGTACCTTCAAGACGCATATATCCATCCCGTTTTCA
rJMSF009F21+          GGGAACCGAACTTCAACCTAAAACCGTACCTTCAAGACGCATATATCCATCCCGTTTTCA
rJMFF010D16+          GGGAACCGAACTTCAACCTAAAACCGTACCTTCAAGACGCATATATCCATCCCGTTTTCA
                      ____________________________________________________________
consensus             GGGAACCGAACTTCAACCTAAAACCGTACCTTCAAGACGCATATATCCATCCCGTTTTCA
 
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rJMSF045E01+          AAGGCAACGAGGACGAGTATGACTACGACGGCATCAGCGAAAAGGCGGACGAAGAGAACG
rJMSF031J09+          AAGGCAACGAGGACGAGTATGACTACGACGGCATCAGCGAAAAGGCGGACGAAGAGAACG
rJMSF011A23+          AAGGCAACGAGGACGAGTATGACTACGACGGCATCAGCGAAAAGGCGGACGAAGAGAACG
rJMSF009F21+          AAGGCAACGAGGACGAGTATGACTACGACGGCATCAGCGAAAAGGCGGACGAAGAGAACG
rJMFF010D16+          AAGGCAACGAGGACGAGTATGACTACGACGGCATCAGCGAAAAGGCGGACGAAGAGAACG
                      ____________________________________________________________
consensus             AAGGCAACGAGGACGAGTATGACTACGACGGCATCAGCGAAAAGGCGGACGAAGAGAACG
 
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rJMSF045E01+          TGCTGGTCCAAACGAAACGTCAGTCTCGGAAAAACACCCCAGCTCCCAGCAAAGGCAGCG
rJMSF031J09+          TGCTGGTCCAAACGAAACGTCAGTCTCGGAAAAACACCCCAGCTCCCAGCAAAGGCAGCG
rJMSF011A23+          TGCTGGTCCAAACGAAACGTCAGTCTCGGAAAAACACCCCAGCTCCCAGCAAAGGCAGCG
rJMSF009F21+          TGCTGGTCCAAACGAAACGTCAGTCTCGGAAAAACACCCCAGCTCCCAGCAAAGGCAGCG
rJMFF010D16+          TGCTGGTCCAAACGAAACGTCAGTCTCGGAAAAACACCCCAGCTCCCAGCAAAGGCAGCG
                      ____________________________________________________________
consensus             TGCTGGTCCAAACGAAACGTCAGTCTCGGAAAAACACCCCAGCTCCCAGCAAAGGCAGCG
 
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rJMSF045E01+          GTGGCTCCTCGCCATCGTTTCGGGTGGAGGTGATTCATGAAAAGGAAAAACCTTGATCTT
rJMSF031J09+          GTGGCTCCTCGCCATCGTTTCGGGTGGAGGTGATTCATGAAAAGGAAAAACCTTGATCTT
rJMSF011A23+          GTGGCTCCTCGCCATCGTTTCGGGTGGAGGTGATTCATGAAAAGGAAAAACCTTGATCTT
rJMSF009F21+          GTGGCTCCTCGCCATCGTTTCGGGTGGAGGTGATTCATGAAAAGGAAAAACCTTGATCTT
rJMFF010D16+          GTGGCTCCTCGCCATCGTTTCGGGTGGAGGTGATTCATGAAAAGGAAAAACCTTGATCTT
                      ____________________________________________________________
consensus             GTGGCTCCTCGCCATCGTTTCGGGTGGAGGTGATTCATGAAAAGGAAAAACCTTGATCTT
 
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rJMSF045E01+          TTTATATACACTGCAAAATGTGATATACTAGGTACCACCGCCATGTAAATTATAGCAAGA
rJMSF031J09+          TTTATATACACTGCAAAATGTGATATACTAGGTACCACCGCCATGTAAATTATAGCAAGA
rJMSF011A23+          TTTATATACACTGCAAAATGTGATATACTAGGTACCACCGCCATGTAAATTATAGCAAGA
rJMSF009F21+          TTTATATACACTGCAAAATGTGATATACTAGGTACCACCGCCATGTAAATTATAGCAAGA
rJMFF010D16+          TTTATATACACTGCAAAATGTGATATACTAGGTACCACCGCCATGTAAATTATAGCAAGA
rJMFF003H01+                                               CCGCCATGTAAATTNTAGCAAGA
                      ____________________________________________________________
consensus             TTTATATACACTGCAAAATGTGATATACTAGGTACCACCGCCATGTAAATTATAGCAAGA
 
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rJMSF045E01+          GCTTTTCTTTCAAAATTTTGTGTGTATAATCATGTAGTTGCAGGTTCACCATGTGGAGAC
rJMSF031J09+          GCTTTTCTTTCAAAATTTTGTGTGTATAATCATGTAGTTGCAGGTTCACCATGTGGAGAC
rJMSF011A23+          GCTTTTCTTTCAAAATTTTGTGTGTATAATCATGTAGTTGCAGGTTCACCATGTGGAGAC
rJMSF009F21+          GCTTTTCTTTCAAAATTTTGTGTGTATAATCATGTAGTTGCAGGTTCACCATGTGGAGAC
rJMFF010D16+          GCTTTTCTTTCAAAATTTTGTGTGTATAATCATGTAGTTGCAGGTTCACCATGTGGAGAC
rJMFF003H01+          GCTTTTNTTTCAAAATTTTGNGNGTATAATCANGTAGTTGCAGGTTCNCCATGTGGNGAC
                      ____________________________________________________________
consensus             GCTTTTCTTTCAAAATTTTGTGTGTATAATCATGTAGTTGCAGGTTCACCATGTGGAGAC
 
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rJMSF045E01+          TTTTTTCCCTACTGGT                                            
rJMSF031J09+          TTTTTTCCCTACTGGT                                            
rJMSF011A23+          TT                                                          
rJMSF009F21+          TTT                                                         
rJMFF010D16+          TTTTTTCCCTACTGGTTCACCAACTGGAAAGGCATAATTCATCA                
rJMFF003H01+          TTTTTTCCCTACTGGTTCNCCAACTGGAAAGGCATAATTCATCAATGGGAAGNGNGNGAT
                      ____________________________________________________________
consensus             TTTTTTCCCTACTGGTTCACCAACTGGAAAGGCATAATTCATCAATGGGAAGNGNGNGAT
 
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rJMFF003H01+          TCATTNTTTTACTNTGTTCATTAATTTGCTTCCTTGTTACTAAAGTATTCATAGAACCAT
                      ____________________________________________________________
consensus             TCATTNTTTTACTNTGTTCATTAATTTGCTTCCTTGTTACTAAAGTATTCATAGAACCAT
 
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rJMFF003H01+          TTTGATGTAAACTAGAAGTTGGTTTGCCCTTTTAATACATGGATTGTGAAANGACTTGGT
                      ____________________________________________________________
consensus             TTTGATGTAAACTAGAAGTTGGTTTGCCCTTTTAATACATGGATTGTGAAANGACTTGGT
 
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rJMFF003H01+          TCCTATTTTTTGGTAGGATAAATTGNGNGNGNGNGNGTTTTTATTTTTTTATTATTTTTT
                      ____________________________________________________________
consensus             TCCTATTTTTTGGTAGGATAAATTGNGNGNGNGNGNGTTTTTATTTTTTTATTATTTTTT
 
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rJMFF003H01+          TTTTTAATTTGGGGGAGGGGGTTGGCGAGGATAACTTACAATTACTATTTAAGAGTGTAT
                      ____________________________________________________________
consensus             TTTTTAATTTGGGGGAGGGGGTTGGCGAGGATAACTTACAATTACTATTTAAGAGTGTAT
 
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rJMFF003H01+          ATAGTATAAATTTCATTCTTGTATACTATGTAAATTTCATTCTTGTGTATTAGTTGGAGC
                      ____________________________________________________________
consensus             ATAGTATAAATTTCATTCTTGTATACTATGTAAATTTCATTCTTGTGTATTAGTTGGAGC
 
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rJMFF003H01+          GTTATGCTGTGTAACCGTGTGCATCATGCAAGGTGCAATTGAATTCATAATTCTATACTA
                      ____________________________________________________________
consensus             GTTATGCTGTGTAACCGTGTGCATCATGCAAGGTGCAATTGAATTCATAATTCTATACTA