| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF003C15 | Sequence | 326 | 013597 (7) | ref|XP_011089412.1| | 7e-44 | PREDICTED: 60S ribosomal protein L35-like [Sesamum indicum] | 673 | 013597 (7) | ref|XP_007206099.1| | 3e-72 | hypothetical protein PRUPE_ppa012945mg [Prunus persica] gb|EMJ07298.1| hypotheti |
| JMFF024E05 | Sequence | 483 | 013597 (7) | ref|XP_007206099.1| | 2e-73 | hypothetical protein PRUPE_ppa012945mg [Prunus persica] gb|EMJ07298.1| hypotheti | 626 | 013597 (7) | ref|XP_007206099.1| | 1e-72 | hypothetical protein PRUPE_ppa012945mg [Prunus persica] gb|EMJ07298.1| hypotheti |
| JMFN003H21 | Sequence | 538 | 013597 (7) | ref|XP_007206099.1| | 7e-73 | hypothetical protein PRUPE_ppa012945mg [Prunus persica] gb|EMJ07298.1| hypotheti | |||||
| JMSF023H10 | Sequence | 606 | 013597 (7) | ref|XP_007206099.1| | 1e-72 | hypothetical protein PRUPE_ppa012945mg [Prunus persica] gb|EMJ07298.1| hypotheti | 541 | 013597 (7) | ref|XP_007206099.1| | 5e-73 | hypothetical protein PRUPE_ppa012945mg [Prunus persica] gb|EMJ07298.1| hypotheti |
This contig is upended
. : . : . : . : . : . :
rJMFF024E05- ACT
rJMFF003C15- ACTACTTGGAACT
____________________________________________________________
consensus ACTACTTGGAACT
. : . : . : . : . : . :
rJMFF024E05- TGGCAATTGTAGCCTTGCAAAGTGTTACAGAATTGATGGCAATCTATCATACAAGATTAC
JMSF023H10+ TCATACAAGATTAC
rJMFF003C15- TGGCAATTGCAGCCTTGCAAAGTGTTACAGAATTGATGGCAATCTATCATACAAGATTAC
____________________________________________________________
consensus TGGCAATTGTAGCCTTGCAAAGTGTTACAGAATTGATGGCAATCTATCATACAAGATTAC
. : . : . : . : . : . :
JMFN003H21+ GAAATTAATGGTATGTTGCAAACTGATTAATCTTCCAATCAAAGTTAA
rJMFF024E05- TTCACACAAATTGAAATTAATGGTATGTTGCAAACTGATTAATCTTCCAATCAAAGTTAA
JMSF023H10+ TTCACACAAATTGAAATTAATGGTATGTTGCAAACTGATTAATCTTCCAATCAAAGTTAA
rJMSF023H10- TATGTTGCAAACTGATTAATCTTCCAATCAAAGTTAA
rJMFF003C15- TTCACACAAATTGAAATTAATGGTATGTTGCAAACTGATTAATCTTCCAATCAAAGTTAA
____________________________________________________________
consensus TTCACACAAATTGAAATTAATGGTATGTTGCAAACTGATTAATCTTCCAATCAAAGTTAA
. : . : . : . : . : . :
JMFF003C15+ AACACAGTAAACAAAATTCTNGAATTCAATGTTCTAACTGATATACTC
JMFN003H21+ CATGAACACATTAACACAGTAAACAAAATTCTTGAATTCAATGTTCTAACTGATATACTC
JMFF024E05+ AAACAAAATTCTTGAATTCAATGTTCTAACTGATATACTC
rJMFF024E05- CATGAACACATTAACACAGTAAACAAAATTCTTGAATTCAATGTTCTAACTGATATACTC
JMSF023H10+ CATGAACACATTAACACAGTAAACAAAATTCTTGAATTCAATGTTCTAACTGATATACTC
rJMSF023H10- CATGAACACATTAACACAGTAAACAAAATTCTTGAATTCAATGTTCTAACTGATATACTC
rJMFF003C15- CATGAACACATTAACACAGTAAACAAAATTCTTGAATTCAATGTTCTAACTGATATACTC
____________________________________________________________
consensus CATGAACACATTAACACAGTAAACAAAATTCTTGAATTCAATGTTCTAACTGATATACTC
. : . : . : . : . : . :
JMFF003C15+ AGTTCAAAACAGAGAGAGCATAGTCCTACTCTACACTTTGATAGCATATTTCCTCAAGGG
JMFN003H21+ AGTTCAAAACAGAGAGAGCATAGTCCTACTCTACACTTTGATAGCATATTTCCTCAAGGG
JMFF024E05+ AGTTCAAAACAGAGAGAGCATAGTCCTACTCTACACTTTGATAGCATATTTCCTCAAGGG
rJMFF024E05- AGTTCAAAACAGAGAGAGCATAGTCCTACTCTACACTTTGATAGCATATTTCCTCAAGGG
JMSF023H10+ AGTTCAAAACAGAGAGAGCATAGTCCTACTCTACACTTTGATAGCATATTTCCTCAAGGG
rJMSF023H10- AGTTCAAAACAGAGAGAGCATAGTCCTACTCTACACTTTGATAGCATATTTCCTCAAGGG
rJMFF003C15- AGTTCAAAACAGAGAGAGCATAGTCCTACTCTACACTTTGATAGCATATTTCCTCAAGGG
____________________________________________________________
consensus AGTTCAAAACAGAGAGAGCATAGTCCTACTCTACACTTTGATAGCATATTTCCTCAAGGG
. : . : . : . : . : . :
JMFF003C15+ GAAATACATCTCCTTCTTCTTTTCCCTTTCTGTCTTCAAAGAAGCCTGGTGCTTGGTCAG
JMFN003H21+ GAAATACATCTCCTTCTTCTTTTCCCTTTCTGTCTTCAAAGAAGCCTGGTGCTTGGTCAG
JMFF024E05+ GAAATACATCTCCTTCTTCTTTTCCCTTTCTGTCTTCAAAGAAGCCTGGTGCTTGGTCAG
rJMFF024E05- GAAATACATCTCCTTCTTCTTTTCCCTTTCTGTCTTCAAAGAAGCCTGGTGCTTGGTCAG
JMSF023H10+ GAAATACATCTCCTTCTTCTTTTCCCTTTCTGTCTTCAAAGAAGCCTGGTGCTTGGTCAG
rJMSF023H10- GAAATACATCTCCTTCTTCTTTTCCCTTTCTGTCTTCAAAGAAGCCTGGTGCTTGGTCAG
rJMFF003C15- GAAATACATCTCCTTCTTCTTTTCCCTTTCTGTCTTCAAAGAAGCCTGGTGCTTGGTCAG
____________________________________________________________
consensus GAAATACATCTCCTTCTTCTTTTCCCTTTCTGTCTTCAAAGAAGCCTGGTGCTTGGTCAG
. : . : . : . : . : . :
JMFF003C15+ ACGCCGGCGGATGGCTCTGGTCTTCTTGGGGCGGAGATCAAGAGGCAAATACTTCTTGTT
JMFN003H21+ ACGCCGGCGGATGGCTCTGGTCTTCTTGGGGCGGAGATCAAGAGGCAAATACTTCTTGTT
JMFF024E05+ ACGCCGGCGGATGGCTCTGGTCTTCTTGGGGCGGAGATCAAGAGGCAAATACTTCTTGTT
rJMFF024E05- ACGCCGGCGGATGGCTCTGGTCTTCTTGGGGCGGAGATCAAGAGGCAAATACTTCTTGTT
JMSF023H10+ ACGCCGGCGGATGGCTCTGGTCTTCTTGGGGCGGAGATCAAGAGGCAAATACTTCTTGTT
rJMSF023H10- ACGCCGGCGGATGGCTCTGGTCTTCTTGGGGCGGAGATCAAGAGGCAAATACTTCTTGTT
rJMFF003C15- ACGCCGGCGGATGGCTCTGGTCTTCTTGGGGCGGAGATCAAGAGGCAAATACTTCTTGTT
____________________________________________________________
consensus ACGCCGGCGGATGGCTCTGGTCTTCTTGGGGCGGAGATCAAGAGGCAAATACTTCTTGTT
. : . : . : . : . : . :
JMFF003C15+ CTTATAAGCATTTCTAAGTGCAGCCTTCTGAGTCTGAGAAATCACGGTCAATACCTGTGC
JMFN003H21+ CTTATAAGCATTTCTAAGTGCAGCCTTCTGAGTCTGAGAAATCACGGTCAATACCTGTGC
JMFF024E05+ CTTATAAGCATTTCTAAGTGCAGCCTTCTGAGTCTGAGAAATCACGGTCAATACCTGTGC
rJMFF024E05- CTTATAAGCATTTCTAAGTGCAGCCTTCTGAGTCTGAGAAATCACGGTCAATACCTGTGC
JMSF023H10+ CTTATAAGCATTTCTAAGTGCAGCCTTCTGAGTCTGAGAAATCACGGTCAATACCTGTGC
rJMSF023H10- CTTATAAGCATTTCTAAGTGCAGCCTTCTGAGTCTGAGAAATCACGGTCAATACCTGTGC
rJMFF003C15- CTTATAAGCATTTCTAAGTGCAGCCTTCTGAGTCTGAGAAATCACGGTCAATACCTGTGC
____________________________________________________________
consensus CTTATAAGCATTTCTAAGTGCAGCCTTCTGAGTCTGAGAAATCACGGTCAATACCTGTGC
. : . : . : . : . : . :
JMFF003C15+ AATTGACAGCCTTACTACCTTGATTTTTGACAGCTTAT
JMFN003H21+ AATTGACAGCCTTACTACCTTGATTTTTGACAGCTTATTTGGAGCACCACCAGTAACCTT
JMFF024E05+ AATTGACAGCCTTACTACCTTGATTTTTGACAGCTTATTTGGAGCACCACCAGTAACCTT
rJMFF024E05- AATTGACAGCCTTACTACCTTGATTTTTGACAGCTTATTTGGAGCACCACCAGTAACCTT
JMSF023H10+ AATTGACAGCCTTACTACCTTGATTTTTGACAGCTTATTTGGAGCACCACCAGTAACCTT
rJMSF023H10- AATTGACAGCCTTACTACCTTGATTTTTGACAGCTTATTTGGAGCACCACCAGTAACCTT
rJMFF003C15- AATTGACAGCCTTACTACCTTGATTTTTGACAGCTTATTTGGAGCACCACCAGTAACCTT
____________________________________________________________
consensus AATTGACAGCCTTACTACCTTGATTTTTGACAGCTTATTTGGAGCACCACCAGTAACCTT
. : . : . : . : . : . :
JMFN003H21+ GGCGACGCGAAGGAGGGCGAGCTCGGCCTTGAGATCAGCCAATTGAGCCAGCAGCTCCGC
JMFF024E05+ GGCGACGCGAAGGAGGGCGAGCTCGGCCTTGAGATCAGCCAATTGAGCCAGCAGCTCCGC
rJMFF024E05- GGCGACGCGAAGGAGGGCGAGCTCGGCCTTGAGATCAGCCAATTGAGCCAGCAGCTCCGC
JMSF023H10+ GGCGACGCGAAGGAGGGCGAGCTCGGCCTTGAGATCAGCCAATTGAGCCAGCAGCTCCGC
rJMSF023H10- GGCGACGCGAAGGAGGGCGAGCTCGGCCTTGAGATCAGCCAATTGAGCCAGCAGCTCCGC
rJMFF003C15- GGCGACGCGAAGGAGGGCGAGCTCGGCCTTGAGATCAGCCAATTGAGCCAGCAGCTCCGC
____________________________________________________________
consensus GGCGACGCGAAGGAGGGCGAGCTCGGCCTTGAGATCAGCCAATTGAGCCAGCAGCTCCGC
. : . : . : . : . : . :
JMFN003H21+ TTTGCTCTTGTTCCTCAGCTCGTGAACCTTGATTCTCGCCATGGCTGCTGCTTCCTTAGA
JMFF024E05+ TTTGCTCTTGTTCCTCAGCTCGTGAACCTTGATTCTCGCCATGGCTGCTGCTTCCTTAGA
rJMFF024E05- TTTGCTCTTGTTCCTCAGCTCGTGAACCTTGATTCTCGCCATGGCTGCTGCTTCCTTAGA
JMSF023H10+ TTTGCTCTTGTTCCTCAGCTCGTGAACCTTGATTCTCGCCATGGCTGCTGCTTCCTTAGA
rJMSF023H10- TTTGCTCTTGTTCCTCAGCTCGTGAACCTTGATTCTCGCCATGGCTGCTGCTTCCTTAGA
rJMFF003C15- TTTGCTCTTGTTCCTCAGCTCGTGAACCTTGATTCTCGCCATGGCTGCTGCTTCCTTAGA
____________________________________________________________
consensus TTTGCTCTTGTTCCTCAGCTCGTGAACCTTGATTCTCGCCATGGCTGCTGCTTCCTTAGA
. : . : . : . : . : . :
JMFN003H21+ ATTCCGAAAA
JMFF024E05+ ATTCCGAAAACCCT
rJMFF024E05- ATTCCGAAAACCCT
JMSF023H10+ ATTCCGAAAACCCT
rJMSF023H10- ATTCCGAAAACCCT
rJMFF003C15- ATTCCGAAAACCCTAGCCTTGAATCGGTTCTCCGAGTATCGCTGTTCCAGACAGCGATGA
____________________________________________________________
consensus ATTCCGAAAACCCTAGCCTTGAATCGGTTCTCCGAGTATCGCTGTTCCAGACAGCGATGA