| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF001P15 | Sequence | 536 | 013592 (6) | ref|XP_006365107.1| | 4e-36 | PREDICTED: glycine-rich RNA-binding protein 7-like isoform X2 [Solanum tuberosu | 648 | 013592 (6) | gb|EPS70351.1| | 5e-21 | hypothetical protein M569_04412, partial [Genlisea aurea] |
| JMSF031F12 | Sequence | 458 | 013592 (6) | pdb|4C7Q|A | 2e-31 | Chain A, Solution Structure Of The Nt. Gr-rbp1 Rrm Domain | 725 | 013592 (6) | ref|XP_006365107.1| | 2e-20 | PREDICTED: glycine-rich RNA-binding protein 7-like isoform X2 [Solanum tuberosu |
| JMSF051P08 | Sequence | 676 | 013592 (6) | ref|XP_006365107.1| | 1e-35 | PREDICTED: glycine-rich RNA-binding protein 7-like isoform X2 [Solanum tuberosu | 689 | 013592 (6) | gb|EPS70351.1| | 5e-21 | hypothetical protein M569_04412, partial [Genlisea aurea] |
This contig is upended
. : . : . : . : . : . :
JMSF031F12- GCTCGTCTTCTCTTCTAGTCTT
JMFF001P15- GTCTTCTCTTCTAGTCTT
JMSF051P08- CGTCTTCTCTTCTAGTCTT
____________________________________________________________
consensus GCTCGTCTTCTCTTCTAGTCTT
. : . : . : . : . : . :
JMSF031F12- TAGCTTCTGCTTGTATTTTCTCCTTTCAGTCATGGCAGAAGTTGAGTTCAGATGCTTCGT
JMFF001P15- TAGCTTCTGCTTGTATTTTCTCCTTTCAGTCATGGCAGAAGTTGAGTTCAGATGCTTCGT
JMSF051P08- TAGCTTCTGCTTGTATTTTCTCCTTTCAGTCATGGCAGAAGTTGAGTTCAGATGCTTCGT
____________________________________________________________
consensus TAGCTTCTGCTTGTATTTTCTCCTTTCAGTCATGGCAGAAGTTGAGTTCAGATGCTTCGT
. : . : . : . : . : . :
JMSF031F12- TGGTGGTTTGGCCTGGGCCACCACTGAAAGTTCTCTACATGATGCGTTCTCTTCCTTCGN
JMFF001P15- TGGTGGTTTGGCCTGGGCCACCACTGAAAGTTCTCTACATGATGCGTTCTCTTCCTTCGG
JMSF051P08- TGGTGGTTTGGCCTGGGCCACCACTGAAAGTTCTCTACATGATGCGTTCTCTTCCTTCGG
rJMSF031F12+ ACTGAAAGTTCTCTACANGATGCGTTCTCTTCCTTCGG
____________________________________________________________
consensus TGGTGGTTTGGCCTGGGCCACCACTGAAAGTTCTCTACATGATGCGTTCTCTTCCTTCGG
. : . : . : . : . : . :
JMSF031F12- CGAGGTCATCGAATCGNAGGNCTGTCTGTCTCAAAGCAGTGATCGAATCTCGGTTTCACC
JMFF001P15- CGAGGTCATCGAATCGAAGGTCTGTCTGTCTCAGAGCAGTGATCGAATCTCGGTTTCACC
JMSF051P08- CGAGGTCATCGAATCGAAGGTCTGTCTGTCTCAGAGCAGTGATCGAATCTCGGTTTCACC
rJMSF031F12+ CGAGGTCATCGAATCGAAGGTCTGTCTGTCTCAGAGCAGTGATCGAATCTCGGTTTCACC
rJMSF051P08+ GAGGTCATCGAATCGAAGGTCTGTCTGTCTCAGAGCAGTGATCGAATCTCGGTTTCACC
____________________________________________________________
consensus CGAGGTCATCGAATCGAAGGTCTGTCTGTCTCAGAGCAGTGATCGAATCTCGGTTTCACC
. : . : . : . : . : . :
JMSF031F12- CGATTCNTCTTTGTTGACATGANCTCTCTGTTACTACTACTATGTTACTTTGATCTACTG
JMFF001P15- CGATTCGTCTTTGTTGACATGATCTCTCTGTTACTACTACTATGTTACTTTGATCTACTG
JMSF051P08- CGATTCGTCTTTGTTGACATGATCTCTCTGTTACTACTACTATGTTACTTTGATCTACTG
rJMSF031F12+ CGATTCGTCTTNGTTGACATGATCTCTCTGTTACTACTACTATGTTACTTTGATCTACTG
rJMSF051P08+ CGATTCGTCTTTGTTGACATGATCTCTCTGTTACTACTACTATGTTACTTTGATCTACTG
rJMFF001P15+ GTTGACATGATCTCTCTGTTACTACTACTATGTTACTTTGATCTACTG
____________________________________________________________
consensus CGATTCGTCTTTGTTGACATGATCTCTCTGTTACTACTACTATGTTACTTTGATCTACTG
. : . : . : . : . : . :
JMSF031F12- TTCTCTCTCTCTGTGTTACTATTTGTTACTATTACTTTCCCCTGAAACGATCATCAACGA
JMFF001P15- TTCTCTCTCTCTGTGTTACTATTTGTTACTATTACTTTCCCCTGAAACGATCATCAACGA
JMSF051P08- TTCTCTCTCTCTGTGTTACTATTTGTTACTATTACTTTCCCCTGAAACGATCATCAACGA
rJMSF031F12+ TTCTCTCTCTCTGTGTTACTATTTGTTACTATTACTTTCCCCTGAAACGATCATCAACGA
rJMSF051P08+ TTCTCTCTCTCTGTGTTACTATTTGTTACTATTACTTTCCCCTGAAACGATCATCAACGA
rJMFF001P15+ TTCTCTCTCTCTGTGTTACTATTTGTTACTATTACTTTCCCCTGAAACGATCATCAACGA
____________________________________________________________
consensus TTCTCTCTCTCTGTGTTACTATTTGTTACTATTACTTTCCCCTGAAACGATCATCAACGA
. : . : . : . : . : . :
JMSF031F12- TCGTGAGACCGGTANANCCAGANGTTTTGGCTTCGTTACATTCAAGGATGAGCAAGCAAT
JMFF001P15- TCGTGAGACCGGTAGATCCAGAGGTTTTGGCTTCGTTACATTCAAGGATGAGCAAGCAAT
JMSF051P08- TCGTGAGACCGGTAGATCCAGAGGTTTTGGCTTCGTTACATTCAAGGATGAGCAAGCAAT
rJMSF031F12+ TCGTGAGACCGGTAGATCCAGAGGTTTNGGCTTCGTTACATTCAAGGATGAGCAAGCAAT
rJMSF051P08+ TCGTGAGACCGGTAGATCCAGAGGTTTTGGCTTCGTTACATTCAAGGATGAGCAAGCAAT
rJMFF001P15+ TCGTGAGACCGGTAGATCCAGAGGTTTTGGCTTCGTTACATTCAAGGATGAGCAAGCAAT
____________________________________________________________
consensus TCGTGAGACCGGTAGATCCAGAGGTTTTGGCTTCGTTACATTCAAGGATGAGCAAGCAAT
. : . : . : . : . : . :
JMSF031F12- GAAGGATGCTATTGAGGGGATGAACGGCCAGTCTCTTGACGGGCGTAACATAACTGTTAA
JMFF001P15- GAAGGATGCTATTGAGGGGATGAACGGCCAGTCTCTTGACGGGCGTAACATAACTGTTAA
JMSF051P08- GAAGGATGCTATTGAGGGGATGAACGGCCAGTCTCTTGACGGGCGTAACATAACTGTTAA
rJMSF031F12+ GAAGGATGCTATTGAGGGGATGAACGGCCAGTCTCTTGACGGGCGTAACATAACTGTTAA
rJMSF051P08+ GAAGGATGCTATTGAGGGGATGAACGGCCAGTCTCTTGACGGGCGTAACATAACTGTTAA
rJMFF001P15+ GAAGGATGCTATTGAGGGGATGAACGGCCAGTCTCTTGACGGGCGTAACATAACTGTTAA
____________________________________________________________
consensus GAAGGATGCTATTGAGGGGATGAACGGCCAGTCTCTTGACGGGCGTAACATAACTGTTAA
. : . : . : . : . : . :
JMSF031F12- CGAGGCTCANTCTCGC
JMFF001P15- CGAGGCTCAGTCTCGCGGAAGCGGCGGCGGCGGCGGCGGTGGCGGTTTCCGTGGTGGACG
JMSF051P08- CGAGGCTCAGTCTCGCGGAAGCGGCGGCGGCGGCGGCGGTGGCGGTTTCCGTGGTGGACG
rJMSF031F12+ CGAGGCTCAGTCTCGCGGAAGCGGCGNCGGCGNCGGCGGTGGCGGTTTCCGTGGTGGACG
rJMSF051P08+ CGAGGCTCAGTCTCGCGGAAGCGGCGGCGGCGGCGGCGGTGGCGGTTTCCGTGGTGGACG
rJMFF001P15+ CGAGGCTCAGTCTCGCGGAAGCGGCGGCGGCGGCGGCGGTGGCGGTTTCCGTGGTGGACG
____________________________________________________________
consensus CGAGGCTCAGTCTCGCGGAAGCGGCGGCGGCGGCGGCGGTGGCGGTTTCCGTGGTGGACG
. : . : . : . : . : . :
JMFF001P15- TCGTGAGGGTGGAGGCGGTGGCGGCTATGGTGGCC
JMSF051P08- TCGTGAGGGTGGAGGCGGTGGCGGCTATGGTGGCCGCAGGGAAGGTGGTTATGGTGGTGG
rJMSF031F12+ TCGTGAGGGNGGAGGCGGNGGCGGCTATGGTGGCCGCAGGGAAGGTNGTTATGGTGGTGG
rJMSF051P08+ TCGTGAGGGTGGAGGCGGTGGCGGCTATGGTGGCCGCAGGGAAGGTGGTTATGGTGGTGG
rJMFF001P15+ TCGTGAGGGTGGAGGCGGTGGCGGCTATGGTGGCCGCAGGGAAGGTGGTTATGGTGGTGG
____________________________________________________________
consensus TCGTGAGGGTGGAGGCGGTGGCGGCTATGGTGGCCGCAGGGAAGGTGGTTATGGTGGTGG
. : . : . : . : . : . :
JMSF051P08- CGGCGGTGGCGGCTATGGTGGCCGCAGGGAAGGTGGTTATGGAGGCGGTGGCTACGGCGG
rJMSF031F12+ CGGCGGTGGCGGCTATGGTGGCCGCAGGGAAGGTGGTTATGGAGGCGGTGGCTACGGCGG
rJMSF051P08+ CGGCGGTGGCGGCTATGGTGGCCGCAGGGAAGGTGGTTATGGAGGCGGTGGCTACGGCGG
rJMFF001P15+ CGGCGGTGGCGGCTATGGTGGCCGCAGGGAAGGTGGTTATGGAGGCGGTGGCTACGGCGG
____________________________________________________________
consensus CGGCGGTGGCGGCTATGGTGGCCGCAGGGAAGGTGGTTATGGAGGCGGTGGCTACGGCGG
. : . : . : . : . : . :
JMSF051P08- AAGTGACCGCTACTCTAGGGGANGCGATGATGGAAGCTGGAGGAACTAATCTAG
rJMSF031F12+ AGGTGACCGCTACTCTAGGGGAGGCGATGATGGAAGCTGGAGGAACTAATCTAGCTTTAT
rJMSF051P08+ AGGTGACCGCTACTCTAGGGGAGGCGATGATGGAAGCTGGAGGAACTAATCTAGCTTTAT
rJMFF001P15+ AGGTGACCGCTACTCTAGGGGAGGCGATGATGGAAGCTGGAGGAACTAATCTAGCTTTAT
____________________________________________________________
consensus AGGTGACCGCTACTCTAGGGGAGGCGATGATGGAAGCTGGAGGAACTAATCTAGCTTTAT
. : . : . : . : . : . :
rJMSF031F12+ TGTTGCGTGGTTAATGTTTTGTCCCTGGATCTGTTAGATATTAGATCTTGTTAGGGTCCT
rJMSF051P08+ TGTTGCGTGGTTAATGTTTTGTCCCTGGATCTGTTAGATATTAGATCTTGTTAGGGTCCT
rJMFF001P15+ TGTTGCGTGGTTAATGTTTTGTCCCTGGATCTGTTAGATATTAGATCTTGTTAGGGTCCT
____________________________________________________________
consensus TGTTGCGTGGTTAATGTTTTGTCCCTGGATCTGTTAGATATTAGATCTTGTTAGGGTCCT
. : . : . : . : . : . :
rJMSF031F12+ TCTGCTATGGTNTTTGGTGTTACTTTAAGTCTGCGTGTTCTGGTTATCCGTTTCGGTTAT
rJMSF051P08+ TCTGCTATGGTGTTTGGTGTTACTTTAAGTCTGCGTGTTCTGGTTATCCGTTTCGGTTAT
rJMFF001P15+ TCTGCTATGGTGTTTGGTGTTACTTTAAGTCTGCGTGTTCTGGTTATCCGTTTCGGTTAT
____________________________________________________________
consensus TCTGCTATGGTGTTTGGTGTTACTTTAAGTCTGCGTGTTCTGGTTATCCGTTTCGGTTAT
. : . : . : . : . : . :
rJMSF031F12+ CTGTGNTTCGATTTGTTTGTAAATCTG
rJMSF051P08+ CTGTGGTTCGATTTGTTTGTAAATCTGTAT
rJMFF001P15+ CTGTGGTTCGATTTGTTTGTAAATCTGTATTTACAAAGTTCTCGAGGAATGANTAAACGT
____________________________________________________________
consensus CTGTGGTTCGATTTGTTTGTAAATCTGTATTTACAAAGTTCTCGAGGAATGANTAAACGT