| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF001G02 | Sequence | 530 | 015211 | gb|KDO41054.1| | 5e-56 | hypothetical protein CISIN_1g002238mg [Citrus sinensis] | 655 | 013591 (7) | emb|CBI28627.3| | 3e-84 | unnamed protein product [Vitis vinifera] |
| JMFF001O23 | Sequence | 540 | 011917 (6) | emb|CDP01661.1| | 5e-47 | unnamed protein product [Coffea canephora] | 721 | 013591 (7) | emb|CBI28627.3| | 6e-111 | unnamed protein product [Vitis vinifera] |
| JMFS043A06 | Sequence | 598 | 013591 (7) | emb|CBI28627.3| | 5e-70 | unnamed protein product [Vitis vinifera] | |||||
| JMFS149C12 | Sequence | 504 | 013591 (7) | ref|XP_011038249.1| | 1e-109 | PREDICTED: probable receptor protein kinase TMK1 [Populus euphratica] | |||||
| JMSF008J09 | Sequence | 373 | 011917 (6) | emb|CDP01661.1| | 5e-16 | unnamed protein product [Coffea canephora] | 695 | 013591 (7) | emb|CBI28627.3| | 2e-110 | unnamed protein product [Vitis vinifera] |
| JMSF040G10 | Sequence | 776 | 013591 (7) | emb|CBI28627.3| | 1e-106 | unnamed protein product [Vitis vinifera] | |||||
| JMSF053K09 | Sequence | 648 | 011917 (6) | ref|XP_009587166.1| | 6e-56 | PREDICTED: probable receptor protein kinase TMK1 [Nicotiana tomentosiformis] | 928 | 013591 (7) | emb|CAN77178.1| | 8e-162 | hypothetical protein VITISV_021790 [Vitis vinifera] |
This contig is upended
. : . : . : . : . : . :
JMFS149C12- CAAAGGTTAGGCACCGGCACCTTGTTGCCCTAC
____________________________________________________________
consensus CAAAGGTTAGGCACCGGCACCTTGTTGCCCTAC
. : . : . : . : . : . :
JMFS149C12- TCGGGTACTGTCTCGATGGGAACGAGAAACTTCTTGTGTATGAGTACATGCCTCAAGGGA
____________________________________________________________
consensus TCGGGTACTGTCTCGATGGGAACGAGAAACTTCTTGTGTATGAGTACATGCCTCAAGGGA
. : . : . : . : . : . :
JMFS149C12- CTTTAAGTAGGCATCTTTTCAACTGGGCAGAAGAAGGGCTGAAGCCTCTGGAATGGACG-
rJMSF053K09+ GGGCTGAAGCCTCTGGAATGGACGA
____________________________________________________________
consensus CTTTAAGTAGGCATCTTTTCAACTGGGCAGAAGAAGGGCTGAAGCCTCTGGAATGGACGA
. : . : . : . : . : . :
JMFS149C12- AAAAGGTTGACAATCGCATTATATGTTGCTAGAGGAGTGGAGTATCTCCATACTTTAGCA
rJMSF053K09+ AAAAGGTTGACAATCGCATTAGATGTTGCTAGAGGAGTGGAGTATCTCCATACTTTAGCA
____________________________________________________________
consensus AAAAGGTTGACAATCGCATTATATGTTGCTAGAGGAGTGGAGTATCTCCATACTTTAGCA
. : . : . : . : . : . :
JMFS149C12- CACCAAAGTTTCATCCATAGGGACCTTAAGCCTTCGAACATTCTTCTAGGGGACGATATG
rJMSF053K09+ CACCAAAGTTTCATCCATAGGGACCTTAAGCCTTCGAACATTCTTCTAGGGGACGATATG
____________________________________________________________
consensus CACCAAAGTTTCATCCATAGGGACCTTAAGCCTTCGAACATTCTTCTAGGGGACGATATG
. : . : . : . : . : . :
JMFS149C12- AGGGCTAAGGTGGCAGATTTTGGCCTCGTTAGACTTGCTCCTGAAGGGAAAGGCTCCATC
rJMSF053K09+ AGGGCTAAGGTGGCAGATTTTGGCCTCGTTAGACTTGCTCCTGAAGGGAAAGGCTCCATC
____________________________________________________________
consensus AGGGCTAAGGTGGCAGATTTTGGCCTCGTTAGACTTGCTCCTGAAGGGAAAGGCTCCATC
. : . : . : . : . : . :
JMFS149C12- GAGACCAGGATTGCTGGAACTTTCGGATATCTGGCTCCAGAGTATGCAGTAACTGGGAGG
rJMSF053K09+ GAGACCAGGATTGCTGGAACTTTCGGATATCTGGCTCCAGAGTATGCAGTAACTGGGAGG
rJMSF008J09+ TCCAGAGTATGCAGTAACTGGGAGG
rJMSF040G10+ CAGTAACTGGGAGG
rJMFF001O23+ TCCAGAGTATGCAGTAACTGGGAGG
____________________________________________________________
consensus GAGACCAGGATTGCTGGAACTTTCGGATATCTGGCTCCAGAGTATGCAGTAACTGGGAGG
. : . : . : . : . : . :
JMFS149C12- GTAACTACGAAGGTTGATGTGTATAGTTTTGGTGTGATCTTGATGGAGGTGATCACGGGG
rJMSF053K09+ GTAACTACGAAGGTTGATGTGTATAGTTTTGGTGTGATCTTGATGGAGGTGATCACGGGG
rJMSF008J09+ GTAACTACGAAGGTTGATGTGTATAGTTTTGGTGTGATCTTGATGGAGGTGATCACGGGG
rJMSF040G10+ GTAACTACGAAGGTTGATGTGTATAGTTTTGGTGTGATCTTGATGGAGGTGATCACGGGG
rJMFF001O23+ GTAACTACGAAGGTTGATGTGTATAGTTTTGGTGTGATCTTGATGGAGGTGATCACGGGG
rJMFF001G02+ GGG
____________________________________________________________
consensus GTAACTACGAAGGTTGATGTGTATAGTTTTGGTGTGATCTTGATGGAGGTGATCACGGGG
. : . : . : . : . : . :
JMFS149C12- AGGAAGGCTCTGGACGAGAGGCAA-CCCGAGGAGAGCATGCACCTCGTGACGT
rJMSF053K09+ AGGAAGGCTCTGGACGAGAGGCAA-CCCGAGGAGAGCATGCACCTCGTGACGTGGTTCAG
rJMSF008J09+ AGGAAGGCTCTGGACGAGAGGCAA-CCCGAGGAGAGCATGCACCTCGTGACGTGGTTCAG
rJMSF040G10+ AGGAAGGCTCTGGACGAGAGGCAA-CCCGAGGAGAGCATGCACCTCGTGACGTGGTTCAG
JMFS043A06- CGGAAGGTGTCCTTGTTTAG
rJMFF001O23+ AGGAAGGCTCTGGACGAGAGGCAA-CCCGAGGAGAGCATGCACCTCGTGACGTGGTTCAG
rJMFF001G02+ AGGAAGGCTCTGGACGAGAGGCAACCCCGAGGAGAGCATGCACCTCGTGACGTGGTTCAG
____________________________________________________________
consensus AGGAAGGCTCTGGACGAGAGGCAA-CCCGAGGAGAGCATGCACCTCGTGACGTGGTTCAG
. : . : . : . : . : . :
rJMSF053K09+ GAGAATGCACCTAAACA--------AGGACACCTTCCGGGAGACAATTGACCCCGCTATT
rJMSF008J09+ GAGAATGCACCTAAACA--------AGGACACCTTCCGGGAGACAATTGACCCCGCTATT
rJMSF040G10+ GAGAATGCACCTAAACA--------AGGACACCTTCCGGGAGACAATTGACCCCGCTATT
JMFS043A06- GTGCATTCTCCTGAACCACGTCACGAGGACACCTTCCGGGAGACAATTGACCCCGCTATT
rJMFF001O23+ GAGAATGCACCTAAACA--------AGGACACCTTCCGGGAGACAATTGACCCCGCTATT
rJMFF001G02+ GAGAATGCACCTAAACA--------AGGACACCTTCCGGGAGACAATTGACCCCGCTATT
____________________________________________________________
consensus GAGAATGCACCTAAACA--------AGGACACCTTCCGGGAGACAATTGACCCCGCTATT
. : . : . : . : . : . :
rJMSF053K09+ GATTTCAACGAAGAAGTGCTTTCGAGCATAAGCACTGTTGCTGAACTTGCTGGGCACTGC
rJMSF008J09+ GATTTCAACGAAGAAGTGCTTTCGAGCATAAGCACTGTTGCTGAACTTGCTGGGCACTGC
rJMSF040G10+ GATTTCAACGAAGAAGTGCTTTCGAGCATAAGCACTGTTGCTGAACTTGCTGGGCACTGC
JMFS043A06- GATTTCAACGAAGAAGTGCTTTCGAGCATAAGCACTGTTGCTGAACTTGCTGGGCACTGC
rJMFF001O23+ GATTTCAACGAAGAAGTGCTTTCGAGCATAAGCACTGTTGCTGAACTTGCTGGGCACTGC
rJMFF001G02+ GATTTCAACGAAGAAGTGCTTTCGAGCATAAGCACTGTTGCTGAACTTGCTGGGCACTGC
____________________________________________________________
consensus GATTTCAACGAAGAAGTGCTTTCGAGCATAAGCACTGTTGCTGAACTTGCTGGGCACTGC
. : . : . : . : . : . :
rJMSF053K09+ TGTGCAAGGGAGCCGTTCCAAAGGCCTGACATGGGGCACGCTGTCAATGTTCTTTCTTCG
rJMSF008J09+ TGTGCAAGGGAGCCGTTCCAAAGGCCTGACATGGGGCACGCTGTCAATGTTCTTTCTTCG
rJMSF040G10+ TGTGCAAGGGAGCCGTTCCAAAGGCCTGACATGGGGCACGCTGTCAATGTTCTTTCTTCG
JMFS043A06- TGTGCAAGGGAGCCGTTCCAAAGGCCTGACATGGGGCACGCTGTCAATGTTCTTTCTTCG
rJMFF001O23+ TGTGCAAGGGAGCCGTTCCAAAGGCCTGACATGGGGCACGCTGTCAATGTTCTTTCTTCG
rJMFF001G02+ TGTGCAAGGGAGCCGTTCCAAAGGCCTGACATGGGGCACGCTGTCAATGTTCTTTCTTCG
____________________________________________________________
consensus TGTGCAAGGGAGCCGTTCCAAAGGCCTGACATGGGGCACGCTGTCAATGTTCTTTCTTCG
. : . : . : . : . : . :
rJMSF053K09+ TTGGTAGAGCTTTGGAAGCCATCGGAGCAGAACTCGGAGGATATATATGGCATTGACCTA
rJMSF008J09+ TTGGTAGAGCTTTGGAAGCCATCGGAGCAGAACTCGGAGGATATATATGGCATTGACCTA
rJMSF040G10+ TTGGTAGAGCTTTGGAAGCCATCGGAGCAGAACTCGGAGGATATATATGGCATTGACCTA
JMFS043A06- TTGGTAGAGCTTTGGAAGCCATCGGAGCAGAACTCGGAGGATATATATGGCATTGACCTA
rJMFF001O23+ TTGGTAGAGCTTTGGAAGCCATCGGAGCAGAACTCGGAGGATATATATGGCATTGACCTA
rJMFF001G02+ TTGGTAGAGCTTTGGAAGCCATCGGAGCAGAACTCGGAGGATATATATGGCATTGACCTA
____________________________________________________________
consensus TTGGTAGAGCTTTGGAAGCCATCGGAGCAGAACTCGGAGGATATATATGGCATTGACCTA
. : . : . : . : . : . :
rJMSF053K09+ GACATGTCTTTGCCTCAGGCTCTTAAGAAATGGCAGGCATATGAAGGTGGAAGCCACATG
rJMSF008J09+ GACATGTCCTTGCCTCAGGCTCTTAAGAAATGGCAGGCATATGAAGGTGGAAGCCACATG
rJMSF040G10+ GACATGTCTTTGCCTCAGGCTCTTAAGAAATGGCAGGCATATGAAGGTGGAAGCCACATG
JMFS043A06- GACATGTCTTTGCCTCAGGCTCTTAAGAAATGGCAGGCATATGAAGGTGGAAGCCACATG
rJMFF001O23+ GACATGTCTTTGCCTCAGGCTCTTAAGAAATGGCAGGCATATGAAGGTGGAAGCCACATG
rJMFF001G02+ GACATGTCTTTGCCTCAGGCTCTTAAGAAATGGCAGGCATATGAAGGTGGAAGCCACATG
____________________________________________________________
consensus GACATGTCTTTGCCTCAGGCTCTTAAGAAATGGCAGGCATATGAAGGTGGAAGCCACATG
. : . : . : . : . : . :
rJMSF053K09+ GACTCGACATCTTCGTCCTACGTTCCAAGTTTGGATAACACACAGACGAGCATACCAGTC
rJMSF008J09+ GACTCGACATCTTCGTCCTACGTTCCAAGTTTGGATAACACACAGACGAGCATACCAGTC
rJMSF040G10+ GACTCGACATCTTCGTCCTACGTTCCAAGTTTGGATAACACACAGACGAGCATACCAGTC
JMFS043A06- GACTCGACATCTTCGTCCTACGTTCCAAGTTTGGATAACACACAGACGAGCATACCAGTC
rJMFF001O23+ GACTCGACATCTTCGTCCTACGTTCCAAGTTTGGATAACACACAGACGAGCATACCAGTC
rJMFF001G02+ GACTCGACATCTTCGTCCTACGTTCCAAGTTTGGATAACACACAGACGAGCATACCAGTC
____________________________________________________________
consensus GACTCGACATCTTCGTCCTACGTTCCAAGTTTGGATAACACACAGACGAGCATACCAGTC
. : . : . : . : . : . :
rJMSF053K09+ CGCCCGTATGGATTTGCAGAATCGTTCACCTCTGCTGATGGCAGGTGATCGATCGAGGAT
rJMSF008J09+ CGCCCGTATGGATTTGCAGAATCGTTCACCTCTGCTGATGGCAGGTGATCGATCGAGGAT
rJMSF040G10+ CGCCCGTATGGATTTGCAGAATCGTTCACCTCTGCTGATGGCAGGTGATCGATCGAGGAT
JMFS043A06- CGCCCGTATGGATTTGCAGAATCGTTCACCTCTGCTGATGGCAGGTGATCGATCGAGGAT
rJMFF001O23+ CGCCCGTATGGATTTGCAGAATCGTTCACCTCTGCTGATGGCAGGTGATCGATCGAGGAT
rJMFF001G02+ CGCCCGTATGGATTTGCAGAATCGTTCACCTCTGCTGATGGCAGGTGATCGATCGAGGAT
____________________________________________________________
consensus CGCCCGTATGGATTTGCAGAATCGTTCACCTCTGCTGATGGCAGGTGATCGATCGAGGAT
. : . : . : . : . : . :
rJMSF053K09+ CAATGCTGCCACAACATGCATAAGCTTTGTAGCTCGATCTCTGTAAGTTTATGTGATTAT
rJMSF008J09+ CAATGCTGCCACAACATGCATAAGCTTTGTAGCTCGATCTCTGTAAGTTTATGTGATTAT
rJMSF040G10+ CAATGCTGCCACAACATGCATAAGCTTTGTAGCTCGATCTCTGTAAGTTTATGTGATTAT
JMFS043A06- CAATGCTGCCACAACATGCATAAGCTTTGTAGCTCGATCTCTGTAAGTTTATGTGATTAT
rJMFF001O23+ CAATGCTGCCACAACATGCATAAGCTTTGTAGCTCGATCTCTGTAAGTTTATGTGATTAT
rJMFF001G02+ CAATGCTGCCACAACATGCATAAGCTTTGTAGCTCGATCTCTGTAAGTTTATGTGATTAT
____________________________________________________________
consensus CAATGCTGCCACAACATGCATAAGCTTTGTAGCTCGATCTCTGTAAGTTTATGTGATTAT
. : . : . : . : . : . :
rJMSF053K09+ TTTGTTCTTTTCTGGTCTGTCTATGTTTTCTGAGAATCAAGAACTTAGCTCAGTCT
rJMSF008J09+ TTTGTTCTTTTCTGGTCTGTCTATGTTTTCTGAGAATCAAGAACTTAGCTCAGTCTTGAA
rJMSF040G10+ TTTGTTCTTTTCTGGTCTGTCTATGTTTTCTGAGAATCAAGAACTTAGCTCNGTCTTGAA
JMFS043A06- TTTGTTCTTTTCTGGTCTGTCTATGTTTTCTGAGAATCAAGAACTTAGCTCAGTCTTGAA
rJMFF001O23+ TTTGTTCTTTTCTGGTCTGTCTATGTTTTCTGAGAATCAAGAACTTAGCTCAGTCTTGAA
rJMFF001G02+ TTTGTTCTTTTCTGGTCTGTCTATGTTTTCTGAGAATCAAGAACTTAGCTCAGTCTTGAA
____________________________________________________________
consensus TTTGTTCTTTTCTGGTCTGTCTATGTTTTCTGAGAATCAAGAACTTAGCTCAGTCTTGAA
. : . : . : . : . : . :
rJMSF008J09+ GTTC
rJMSF040G10+ GTT
JMFS043A06- GTTCAGTGAGCCTTGTAATGTAA
rJMFF001O23+ GTTCAGTGAGCCTTGTAATGTAA
rJMFF001G02+ GTTCAGTGAGCCTTGTAATGTAATGTTTCTTAAGAGTTAAGAATGGCCACTCAATATGCT
____________________________________________________________
consensus GTTCAGTGAGCCTTGTAATGTAATGTTTCTTAAGAGTTAAGAATGGCCACTCAATATGCT