| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF042K05 | Sequence | 659 | 013586 (7) | ref|XP_004238948.1| | 4e-38 | PREDICTED: putative late blight resistance protein homolog R1B-16 [Solanum lyco | 418 | 015965 | |||
| JMFS006H02 | Sequence | 567 | 013586 (7) | ref|XP_004238948.1| | 9e-23 | PREDICTED: putative late blight resistance protein homolog R1B-16 [Solanum lyco | |||||
| JMFS053E09 | Sequence | 584 | 013586 (7) | ref|XP_004238948.1| | 2e-24 | PREDICTED: putative late blight resistance protein homolog R1B-16 [Solanum lyco | |||||
| JMFS058C06 | Sequence | 586 | 013586 (7) | ref|XP_004238948.1| | 5e-34 | PREDICTED: putative late blight resistance protein homolog R1B-16 [Solanum lyco | |||||
| JMFS155D10 | Sequence | 602 | 013586 (7) | ref|XP_004238948.1| | 2e-24 | PREDICTED: putative late blight resistance protein homolog R1B-16 [Solanum lyco | |||||
| JMFS156E01 | Sequence | 607 | 013586 (7) | ref|XP_004238948.1| | 2e-24 | PREDICTED: putative late blight resistance protein homolog R1B-16 [Solanum lyco | |||||
| JMSF052G11 | Sequence | 674 | 013586 (7) | ref|XP_004238948.1| | 1e-28 | PREDICTED: putative late blight resistance protein homolog R1B-16 [Solanum lyco | 928 | 004423 (2) | ref|XP_009796673.1| | 162 | PREDICTED: uncharacterized protein LOC104243211 [Nicotiana sylvestris] |
This contig is upended
. : . : . : . : . : . :
JMFF042K05+ GTGATACTCAAC
____________________________________________________________
consensus GTGATACTCAAC
. : . : . : . : . : . :
JMFS058C06+ TGGCCAAAGTAGTCTGNCCAAGTCCTGGCATACCCAC
JMFF042K05+ TCTTTCATCCTTGAAAACCTTGTTGGCCAAAGTAGTCTTGCCAAGTCCTGGCATACCCAC
JMSF052G11+ CCTGGCATACCCAC
____________________________________________________________
consensus TCTTTCATCCTTGAAAACCTTGTTGGCCAAAGTAGTCTTGCCAAGTCCTGGCATACCCAC
. : . : . : . : . : . :
JMFS058C06+ TATCGAGATAACTTCAAACCCTTTTGATCCACCAGTGAGACGTTGGACTATAGCATCAAC
JMFF042K05+ TATCGAGATAACTTCAAACCCTTTTGATCCACCAGTGAGACGTTGGACTATAGCATCAAC
JMFS156E01+ CTTCAAACCCTTTTGATCCACCAGTGAGACGTTGGACTATAGCATCAAC
JMFS053E09+ TTTGATCCACCAGTGAGACGTTGGACTATAGCATCAAC
JMFS006H02+ AGACGTTGGACTATAGCATCAAC
JMFS155D10+ CCTTTTGATCCACCAGTGAGACGTTGGACTATAGCATCAAC
JMSF052G11+ TATCGAGATAACTTCAAACCCTTTTGATCCACCAGTGAGACGTTGGACTATAGCATCAAC
____________________________________________________________
consensus TATCGAGATAACTTCAAACCCTTTTGATCCACCAGTGAGACGTTGGACTATAGCATCAAC
. : . : . : . : . : . :
JMFS058C06+ CTCGCCATCAAAACCCACCACATCATCTTCCTCCACAATAGGAGGATTAGGAGCCCGATT
JMFF042K05+ CTCGCCATCAAAACCCACCACATCATCTTCCTCCACAATAGGAGGATTAGGAGCCCGATT
JMFS156E01+ CTCGCCATCAAAACCCACCACATCATCTTCCTCCACAATAGGAGGATTAGGAGCCCGATT
JMFS053E09+ CTCGCCATCAAAACCCACCACATCATCTTCCTCCACAATAGGAGGATTAGGAGCCCGATT
JMFS006H02+ CTCGCCATCANAACCCACCACATCATCTTCCTCCACAATAGGAGGATTAGGAGCCCGATT
JMFS155D10+ CTCGCCATCAAAACCCACCACATCATCTTCCTCCACAATAGGAGGATTAGGAGCCCGATT
JMSF052G11+ CTCGCCATCAAAACCCACCACATCATCTTCCTCCACAATAGGAGGATTAGGAGCCCGATT
____________________________________________________________
consensus CTCGCCATCAAAACCCACCACATCATCTTCCTCCACAATAGGAGGATTAGGAGCCCGATT
. : . : . : . : . : . :
JMFS058C06+ ATGCCAGATTAACGATTCATCATCTCGGAGAAGATCAAGGTCATACGTCGGATGATCTTG
JMFF042K05+ ATGCCAGATTAACGATTCATCATCTCGGAGAAGATCAAGGTCATACGTCGGATGATCTTG
JMFS156E01+ ATGCCAGATTAACGATTCATCATCTCGGAGAAGATCAAGGTCATACGTCGGATGATCTTG
JMFS053E09+ ATGCCAGATTAACGATTCATCATCTCGGAGAAGATCAAGGTCATACGTCGGATGATCTTG
JMFS006H02+ ATGCCAGATTAACGATTCATCATCTCGGAGAAGATCAAGGTCATACGTCGGATGATCTTG
JMFS155D10+ ATGCCAGATTAACGATTCATCATCTCGGAGAAGATCAAGGTCATACGTCGGATGATCTTG
JMSF052G11+ ATGCCAGATTAACGATTCATCATCTCGGAGAAGATCAAGGTCATACGTCGGATGATCTTG
____________________________________________________________
consensus ATGCCAGATTAACGATTCATCATCTCGGAGAAGATCAAGGTCATACGTCGGATGATCTTG
. : . : . : . : . : . :
JMFS058C06+ GATCTCTCTCAATCTGATCCGAACTTTCTGAATAGTTCTATCGAGTGCCCGTTTTCGATT
JMFF042K05+ GATCTCTCTCAATCTGATCCGAACTTTCTGAATAGTTCTATCGAGTGCCCGTTTTCGATT
JMFS156E01+ GATCTCTCTCAATCTGATCCGAACTTTCTGAATAGTTCTATCGAGTGCCCGTTTTCGATT
JMFS053E09+ GATCTCTCTCAATCTGATCCGAACTTTCTGAATAGTTCTATCGAGTGCCCGTTTTCGATT
JMFS006H02+ GATCTCTCTCAATCTGATCCGAACTTTCTGAATAGTTCTATCGAGTGCCCGTTTTCGATT
JMFS155D10+ GATCTCTCTCAATCTGATCCGAACTTTCTGAATAGTTCTATCGAGTGCCCGTTTTCGATT
JMSF052G11+ GATCTCTCTCAATCTGATCCGAACTTTCTGAATAGTTCTATCGAGTGCCCGTTTTCGATT
____________________________________________________________
consensus GATCTCTCTCAATCTGATCCGAACTTTCTGAATAGTTCTATCGAGTGCCCGTTTTCGATT
. : . : . : . : . : . :
JMFS058C06+ CTTGTGTTCGATATCCAGACACCGTAACCATTTCTTGTCGTAGTGGTTTTTGGCAGCCAC
JMFF042K05+ CTTGTGTTCGATATCCAGACACCGTAACCATTTCTTGTCGTAGTAGTTTTTGGCAGCCAC
JMFS156E01+ CTTGTGTTCGATATCCAGACACCGTAACCATTTCTTGTCGTAGTGGTTTTTGGCAGCCAC
JMFS053E09+ CTTGTGTTCGATATCCAGACACCGTAACCATTTCTTGTCGTAGTGGTTTTTGGCAGCCAC
JMFS006H02+ CTTGTGTTCGATATCCAGACACCGTAACCATTTCTTGTCGTAGTGGTTTTTGGCAGCCAC
JMFS155D10+ CTTGTGTTCGATATCCAGACACCGTAACCATTTCTTGTCGTAGTGGTTTTTGGCAGCCAC
JMSF052G11+ CTTGTGTTCGATATCCAGACACCGTAACCATTTCTTGTCGTAGTGGTTTTTGGCAGCCAC
____________________________________________________________
consensus CTTGTGTTCGATATCCAGACACCGTAACCATTTCTTGTCGTAGTGGTTTTTGGCAGCCAC
. : . : . : . : . : . :
JMFS058C06+ GACATATTGGTCGATGAGATCCTCGGCCATGCTGACCACGAACCGGATCTTGTTGATAAG
JMFF042K05+ GACATATTGGTCGATGAGATCCTCGGCCATGCTGACCACGAACCGGATCTTGTTGATAAG
JMFS156E01+ GACATATTGGTCGATGAGATCCTCGGCCATGCTGACCACGAACCGGATCTTGTTGATAAG
JMFS053E09+ GACATATTGGTCGATGAGATCCTCGGCCATGCTGACCACGAACCGGATCTTGTTGATAAG
JMFS006H02+ GACATATTGGTCGATGAGATCCTCGGCCATGCTGACCACGAACCGGATCTTGTTGATAAG
JMFS155D10+ GACATATTGGTCGATGAGATCCTCGGCCATGCTGACCACGAACCGGATCTTGTTGATAAG
JMSF052G11+ GACATATTGGTCGATGAGATCCTCGGCCATGCTGACCACGAACCGGATCTTGTTGATAAG
____________________________________________________________
consensus GACATATTGGTCGATGAGATCCTCGGCCATGCTGACCACGAACCGGATCTTGTTGATAAG
. : . : . : . : . : . :
JMFS058C06+ GCGCTCGAGGATGTCGTTGTGGTACCGGACATTTCCGGCTTCTCTGAAGAATAACTTGAA
JMFF042K05+ GCGCTCGAGGATGTCGTTGTGGTACCGGACATTTCCGGCTTCTCTGAAGAATAACTTGAA
JMFS156E01+ GCGCTCGAGGATGTCGTTGTGGTACCGGACATTTCCGGCTTCTCTGAAGAATAACTTGAA
JMFS053E09+ GCGCTCGAGGATGTCGTTGTGGTACCGGACATTTCCGGCTTCTCTGAAGAATAACTTGAA
JMFS006H02+ GCGCTCGAGGATGTCGTTGTGGTACCGGACATTTCCGGCTTCTCTGAAGAATAACTTGAA
JMFS155D10+ GCGCTCGAGGATGTCGTTGTGGTACCGGACATTTCCGGCTTCTCTGAAGAATAACTTGAA
JMSF052G11+ GCGCTCGAGGATGTCGTTGTGGTACCGGACATTTCCGGCTTCTCTGAAGAATAACTTGAA
____________________________________________________________
consensus GCGCTCGAGGATGTCGTTGTGGTACCGGACATTTCCGGCTTCTCTGAAGAATAACTTGAA
. : . : . : . : . : . :
JMFS058C06+ GTTGCCCAGGTCAGTTAGAACCCCCTGAACCTCGTCCTCGAGGCCAGATATGAGCTGGAC
JMFF042K05+ GTTGCCCAGGTCAGTTAGAACCCCCTGAACCTCGTCCTCGAGGCCAGATATGAGCTGGAC
JMFS156E01+ GTTGCCCAGGTCAGTTAGAACCCCCTGAACCTCGTCCTCGAGGCCAGATATGAGCTGGAC
JMFS053E09+ GTTGCCCAGGTCAGTTAGAACCCCCTGAACCTCGTCCTCGAGGCCAGATATGAGCTGGAC
JMFS006H02+ GTTGCCCAGGTCAGTTAGAACCCCCTGAACCTCGTCCTCGAGGCCAGATATGAGCTGGAC
JMFS155D10+ GTTGCCCAGGTCAGTTAGAACCCCCTGAACCTCGTCCTCGAGGCCAGATATGAGCTGGAC
JMSF052G11+ GTTGCCCAGGTCAGTTAGAACCCCCTGAACCTCGTCCTCGAGGCCAGATATGAGCTGGAC
____________________________________________________________
consensus GTTGCCCAGGTCAGTTAGAACCCCCTGAACCTCGTCCTCGAGGCCAGATATGAGCTGGAC
. : . : . : . : . : . :
JMFS058C06+ GTTCTCTATTAGAAGATGGGTCAAATTCTGTACCAGCAAATTCACCACCACTTCTGCCAT
JMFF042K05+ GTTCTCTATTAGAAGATGGGTCAAATTCTGTACCAGCAAATTCACCACCACTTCTGCCAT
JMFS156E01+ GTTCTCTATTAGAAGATGGGTCAAATTCTGTACCAGCAAATTCACCACCACTTCTGCCAT
JMFS053E09+ GTTCTCTATTAGAAGATGGGTCAAATTCTGTACCAGCAAATTCACCACCACTTCTGCCAT
JMFS006H02+ GTTCTCTATTAGAAGATGGGTCAAATTCTGTACCAGCAAATTCACCACCACTTCTGCCAT
JMFS155D10+ GTTCTCTATTAGAAGATGGGTCAAATTCTGTACCAGCAAATTCACCACCACTTCTGCCAT
JMSF052G11+ GTTCTCTATTAGAAGATGGGTCAAATTCTGTACCAGCAAATTCACCACCACTTCTGCCAT
____________________________________________________________
consensus GTTCTCTATTAGAAGATGGGTCAAATTCTGTACCAGCAAATTCACCACCACTTCTGCCAT
. : . : . : . : . : . :
JMFS058C06+ CTCTGCCTC
JMFF042K05+ CTCTGCCTCTCTCAATCTCTGAGCTCGTTTTGATCTCAAAGAGTCTC
JMFS156E01+ CTCTGCCTCTCTCAATCTCTGAGCTCGTTTTGATCTCAAAGATTCTCAATAGAAACCATT
JMFS053E09+ CTCTGCCTCTCTCAATCTCTGAGCTCGTTTTGATCTCAAAGATTCTCAATAGAAACCATT
JMFS006H02+ CTCTGCCTCTCTCAATCTCTGAGCTCGTTTTGATCTCAAAGATTCTCAATAGAAACCATT
JMFS155D10+ CTCTGCCTCTCTCAATCTCTGAGCTCGTTTTGATCTCAAAGATTCTCAATAGAAACCATT
JMSF052G11+ CTCTGCCTCTCTCAATCTCTGAGCTCGTTTTGATCTCAAAGATTCTCAATAGAAACCATT
____________________________________________________________
consensus CTCTGCCTCTCTCAATCTCTGAGCTCGTTTTGATCTCAAAGATTCTCAATAGAAACCATT
. : . : . : . : . : . :
JMFS156E01+ GCCATCTTTCATGATTAG
JMFS053E09+ GCC
JMFS006H02+ GCCA
JMFS155D10+ GCCATCTTTCATGATTAG
JMSF052G11+ GCCATCTTTCATGATTAGTCTGAGCATCGGCGATGACAAAGTAGTTGACTTGCTTTCTCC
____________________________________________________________
consensus GCCATCTTTCATGATTAGTCTGAGCATCGGCGATGACAAAGTAGTTGACTTGCTTTCTCC