Contig 013581:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF037F01Sequence552013581 (4)emb|CAC43321.1|2e-89putative beta proteasome subunit [Nicotiana tabacum]767013581 (4)ref|XP_009600687.1|6e-138PREDICTED: proteasome subunit beta type-7-A-like [Nicotiana tomentosiformis]
JMSF051O24Sequence633013581 (4)ref|XP_009796734.1|8e-111PREDICTED: proteasome subunit beta type-7-A-like [Nicotiana sylvestris] ref|XP_0695013581 (4)ref|XP_009600687.1|6e-122PREDICTED: proteasome subunit beta type-7-A-like [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMSF051O24-                                                 ACATCTCATCAGATGAAATAG
rJMFF037F01-                         TCTTATATATTTTGTCTGAAAGCAACATCTCATCAGATGAAATAG
                      ____________________________________________________________
consensus                            TCTTATATATTTTGTCTGAAAGCAACATCTCATCAGATGAAATAG
 
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rJMSF051O24-          TTCACACAAATAGAAGATTCAAGCATGGCAACATAATAAAAAATAAATAAAGAAAGCAAT
rJMFF037F01-          TTCACACAAATAGAAGATTCAAGCATGGCAACATAATAAAAAATAAATAAAGAAAGCAAT
                      ____________________________________________________________
consensus             TTCACACAAATAGAAGATTCAAGCATGGCAACATAATAAAAAATAAATAAAGAAAGCAAT
 
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rJMSF051O24-          CTTGCATTCTTGCAGCAGCATAACTCACTCTTCCATAGCATCACCACCTTCTATCACTTC
rJMFF037F01-          CTTGCATTCTTGCAGCAGCATAACTCACTCTTCCATAGCATCACCACCTTCTATCACTTC
                      ____________________________________________________________
consensus             CTTGCATTCTTGCAGCAGCATAACTCACTCTTCCATAGCATCACCACCTTCTATCACTTC
 
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rJMSF051O24-          TACCATATCTCTCAACGGTGTAATTTTCGTCAGAAGAACCTCAGTCTTTTTAGGAAAGAC
rJMFF037F01-          TACCATATCTCTCAACGGTGTAATTTTCGTCAGAAGAACCTCAGTCTTTTTAGGAAAGAC
                      ____________________________________________________________
consensus             TACCATATCTCTCAACGGTGTAATTTTCGTCAGAAGAACCTCAGTCTTTTTAGGAAAGAC
 
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rJMSF051O24-          ATAACCCTTCTGAGGATAGGTTCGGGGATTCGGCAACTTGTGGTTTCTAATGTATTCTGC
rJMFF037F01-          ATAACCCTTCTGAGGATAGGTTCGGGGATTCGGCAACTTGTGGTTTCTAATGTATTCTGC
                      ____________________________________________________________
consensus             ATAACCCTTCTGAGGATAGGTTCGGGGATTCGGCAACTTGTGGTTTCTAATGTATTCTGC
 
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rJMSF051O24-          ATGCCCCTTTGTTATAACACAAACATCAACATTGCTTCCACTGCCCAGATCATTGAAAAT
rJMFF037F01-          ATGCCCCTTTGTTATAACACAAACATCAACATTGCTTCCACTGCCCAGATCATTGAAAAT
                      ____________________________________________________________
consensus             ATGCCCCTTTGTTATAACACAAACATCAACATTGCTTCCACTGCCCAGATCATTGAAAAT
 
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rJMSF051O24-          TCCTGCCAGTATCGCATCTGTCACCAGTTGAATTCCGTCTTCCCTAGTTAGCCCTTCTTT
rJMFF037F01-          TCCTGCCAGTATCGCATCTGTCACCAGTTGAATTCCGTCTTCCCTAGTTAGCCCTTCTTT
                      ____________________________________________________________
consensus             TCCTGCCAGTATCGCATCTGTCACCAGTTGAATTCCGTCTTCCCTAGTTAGCCCTTCTTT
 
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rJMSF051O24-          GTATCTTGACTCAAAGACGGACATTGCTGCTAGGGAACCAGAGCCCATTGTAGCAAATGG
rJMFF037F01-          GTATCTTGACTCAAAGACGGACATTGCTGCTAGGGAACCAGAGCCCATTGTAGCAAATGG
JMSF051O24+                                                CCAGAGCCCATTGTAGCAAATGG
                      ____________________________________________________________
consensus             GTATCTTGACTCAAAGACGGACATTGCTGCTAGGGAACCAGAGCCCATTGTAGCAAATGG
 
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rJMSF051O24-          CAGTGTGTCAGTTGAACCATGCGGATAAATAGTGTGCAAATGAGGACCAGTGATATCAAC
rJMFF037F01-          CAGTGTGTCAGTTGAACCATGCGGATAAATAGTGTGCAAATGAGGACCAGTGATATCAAC
JMSF051O24+           CAGTGTGTCAGTTGAACCATGCGGATAAATAGTGTGCAAATGAGGACCAGTGATATCAAC
                      ____________________________________________________________
consensus             CAGTGTGTCAGTTGAACCATGCGGATAAATAGTGTGCAAATGAGGACCAGTGATATCAAC
 
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rJMSF051O24-          TCCCCCAAGAACCAAAGCAGCTGAAACATATCCTTGGTGACTGAAAAGATGGGACTTCAA
rJMFF037F01-          TCCCCCAAGAACCAAAGCAGCTGAAACATATCCTTGGTGACTGAAAAGATGGGACTTCAA
JMFF037F01+            CCCCCAAGAACCAAAGCAGCTGAAACATATCCTTGGTGACTGAAAAGATGGGACTTCAA
JMSF051O24+           TCCCCCAAGAACCAAAGCAGCTGAAACATATCCTTGGTGACTGAAAAGATGGGACTTCAA
                      ____________________________________________________________
consensus             TCCCCCAAGAACCAAAGCAGCTGAAACATATCCTTGGTGACTGAAAAGATGGGACTTCAA
 
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rJMSF051O24-          AAGTGTAAGAGCTGTCACAACCCTGGATTCACGGCCAGTGTGATATCTATGAAGCTTCAG
rJMFF037F01-          AAGTGTAAGAGCTGTCACAACCCTGGATTCACGGCCAGTGTGATATCTATGAAGCTTCAG
JMFF037F01+           AAGTGTAAGAGCTGTCACAACCCTGGATTCACGGCCAGTGTGATATCTATGAAGCTTCAG
JMSF051O24+           AAGTGTAAGAGCTGTCACAACCCTGGATTCACGGCCAGTGTGATATCTATGAAGCTTCAG
                      ____________________________________________________________
consensus             AAGTGTAAGAGCTGTCACAACCCTGGATTCACGGCCAGTGTGATATCTATGAAGCTTCAG
 
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rJMSF051O24-          TTGGGAACTGACCATGTCAGTTACAGCCTCGGTATCAGCAGCAGTCCCTGCTCCACAACA
rJMFF037F01-          TTGGGAACTGACCATGTCAGTTACAGCCTCGGTATCAGCAGCAGTCCCTGCTCCACAACA
JMFF037F01+           TTGGGAACTGACCATGTCAGTTACAGCCTCGGTATCAGCAGCAGTCCCTGCTCCACAACA
JMSF051O24+           TTGGGAACTGACCATGTCAGTTACAGCCTCGGTATCAGCAGCAGTCCCTGCTCCACAACA
                      ____________________________________________________________
consensus             TTGGGAACTGACCATGTCAGTTACAGCCTCGGTATCAGCAGCAGTCCCTGCTCCACAACA
 
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rJMSF051O24-          ATAA                                                        
rJMFF037F01-          ATAAATATTAGGAGCCATGTAGTGAATTTTCTCACAATTCTTATCAGCAACTATGGGTCC
JMFF037F01+           ATAAATATTAGGAGCCATGTAGTGAATTTTCTCACAATTCTTATCAGCAACTATGGGTCC
JMSF051O24+           ATAAATATTAGGAGCCATGTAGTGAATTTTCTCACAATTCTTATCAGCAACTATGGGTCC
                      ____________________________________________________________
consensus             ATAAATATTAGGAGCCATGTAGTGAATTTTCTCACAATTCTTATCAGCAACTATGGGTCC
 
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rJMFF037F01-          TT                                                          
JMFF037F01+           TTCAGTGGCTCGTGTGTCCGCTCCGAGAATAACACCATCCTGAAAAATTAATCCCACGAT
JMSF051O24+           TTCAGTGGCTCGTGTGTCCGCTCCGAGAATAACACCATCCTGAAAAATTAATCCCACGAT
                      ____________________________________________________________
consensus             TTCAGTGGCTCGTGTGTCCGCTCCGAGAATAACACCATCCTGAAAAATTAATCCCACGAT
 
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JMFF037F01+           GGTAGTTCCAGTCTTGAGGAAAGACGGAGGCTGAAGCCCTTTCTTCACGAGCATCTCATT
JMSF051O24+           GGTAGTTCCAGTCTTGAGGAAAGACGGAGGCTGAAGCCCTTTCTTCACGAGCATCTCATT
                      ____________________________________________________________
consensus             GGTAGTTCCAGTCTTGAGGAAAGACGGAGGCTGAAGCCCTTTCTTCACGAGCATCTCATT
 
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JMFF037F01+           CCTTCGGCACAAATCGAAGCTAAAACCGCCCTTGGCCGGAACATCCGTCGTTGACTTCAC
JMSF051O24+           CCTTCGGCACAAATCGAAGCTAAAACCGCCCTTGGCCGGAACATCCGTCGTTGACTTCAC
                      ____________________________________________________________
consensus             CCTTCGGCACAAATCGAAGCTAAAACCGCCCTTGGCCGGAACATCCGTCGTTGACTTCAC
 
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JMFF037F01+           CATTGCAGATATCAGAGCCTAACCGCAAGAAAAGATTTGCAAACTATTAGGGTTGCCCGA
JMSF051O24+           CATTGCAGATATCAGAGCCTAACCGCAAGAAAAGATTTGCAAACTATTAGGGTTGCCCGA
                      ____________________________________________________________
consensus             CATTGCAGATATCAGAGCCTAACCGCAAGAAAAGATTTGCAAACTATTAGGGTTGCCCGA
 
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JMFF037F01+           TGATCTAAGAACAAGTAGAGATCTTATTCTCGCAGGGAGGGGGAGCTTGGAAAAAAAGT 
JMSF051O24+           TGATCTATGAACAAGTAGAGATCTTATTCTCGCAGGGAGGGGGAGCTTGGAAAAGAAGTC
                      ____________________________________________________________
consensus             TGATCTATGAACAAGTAGAGATCTTATTCTCGCAGGGAGGGGGAGCTTGGAAAAGAAGTC