Contig 013575:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF051H09-                                                 ATATAAATAAAGAACGCTACA
                      ____________________________________________________________
consensus                                                    ATATAAATAAAGAACGCTACA
 
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rJMSF051H09-          TAGGCAATACAAAATCAAATTTTTAACCCAAACTAAGTTAGAAGAACTACTAGGCCTGAA
                      ____________________________________________________________
consensus             TAGGCAATACAAAATCAAATTTTTAACCCAAACTAAGTTAGAAGAACTACTAGGCCTGAA
 
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rJMSF051H09-          GGGATGGAAAGTTCACAACCTCATAGCTGACAAGGTGAAGAGAAGTTACAACCGTGTATA
                      ____________________________________________________________
consensus             GGGATGGAAAGTTCACAACCTCATAGCTGACAAGGTGAAGAGAAGTTACAACCGTGTATA
 
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rJMSF051H09-          GCTGACAAGGTGAAATCTAATTTAAGCATATCTAACATGAAAGCCTATAAAACAGTTTAT
                      ____________________________________________________________
consensus             GCTGACAAGGTGAAATCTAATTTAAGCATATCTAACATGAAAGCCTATAAAACAGTTTAT
 
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rJMSF051H09-          AAGATTCTACATAAATCTCACAAGTCAAAAGATAATAAACAATTGACCAAGACAATCAAG
JMFN034I22+                                  GTCAAAAGATAATAAACAATTGNCCAAGACAATCAAG
                      ____________________________________________________________
consensus             AAGATTCTACATAAATCTCACAAGTCAAAAGATAATAAACAATTGACCAAGACAATCAAG
 
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rJMSF051H09-          AGTCGCCAATCAAGAAGAGCTCCCTCGCAGACGATCCAGAAGCAGGGTAGGGTATCTTAG
JMFN034I22+           AGTCGCCAATCAAGAAGAGCTCCCTCGCAGACGATCCAGAAGCAGGGTAGGGTATCTTAG
JMSF051H09+                                   TCGCAGACGATCCAGAAGCAGGGTAGGGTATCTTAG
                      ____________________________________________________________
consensus             AGTCGCCAATCAAGAAGAGCTCCCTCGCAGACGATCCAGAAGCAGGGTAGGGTATCTTAG
 
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rJMSF051H09-          TATCCATCCAATGACAGGAATCTGATAAAGAAAAACCTTGACAGATGGCCAAAAACCACC
JMFN034I22+           TATCCATCCAATGACAGGAATCTGATAAAGAAAAACCTTGACAGATGGCCAAAAACCACC
JMSF051H09+           TATCCATCCAATGACAGGAATCTGATAAAGAAAAACCTTGACAGATGGCCAAAAACCACC
                      ____________________________________________________________
consensus             TATCCATCCAATGACAGGAATCTGATAAAGAAAAACCTTGACAGATGGCCAAAAACCACC
 
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rJMSF051H09-          AAAGAGAACAATGCAGCCATATATTTCCATAATTATACCCAAGATTGGCCAACGAACAAA
JMFN034I22+           AAAGAGAACAATGCAGCCATATATTTCCATAATTATACCCAAGATTGGCCAACGAACAAA
JMSF051H09+           AAAGAGAACAATGCAGCCATATATTTCCATAATTATACCCAAGATTGGCCAACGAACAAA
                      ____________________________________________________________
consensus             AAAGAGAACAATGCAGCCATATATTTCCATAATTATACCCAAGATTGGCCAACGAACAAA
 
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rJMSF051H09-          TATTAAGAAGATTCCAAGAAGAATTGAAGCTGAGCCCTTGTAGTTCATTCTATTAGTGAA
JMFN034I22+           TATTAAGAAGATTCCAAGAAGAATTGAAGCTGAGCCCTTGTAGTTCATTCTATTAGTGAA
JMSF051H09+           TATTAAGAAGATTCCAAGAAGAATTGAAGCTGAGCCCTTGTAGTTCATTCTATTAGTGAA
                      ____________________________________________________________
consensus             TATTAAGAAGATTCCAAGAAGAATTGAAGCTGAGCCCTTGTAGTTCATTCTATTAGTGAA
 
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rJMSF051H09-          AATTTGCAGAGTAGACCTCCAACCCAATAAAAGGGATACACCAGCCAACCATAATATATT
JMFN034I22+           AATTTGCAGAGTAGACCTCCAACCCAATAAAAGGGATACACCAGCCAACCATAATATATT
JMSF051H09+           AATTTGCAGAGTAGACCTCCAACCCAATAAAAGGGATACACCAGCCAACCATAATATATT
                      ____________________________________________________________
consensus             AATTTGCAGAGTAGACCTCCAACCCAATAAAAGGGATACACCAGCCAACCATAATATATT
 
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rJMSF051H09-          ACCCAGAGCAAGCAAACCTCTGTCAAAAAAGAGAATGATGGCAAGGAATGTGAACAGGAT
JMFN034I22+           ACCCAGAGCAAGCAAACCTCTGTCAAAAAAGAGAATGATGGCAAGGAATGTGAACAGGAT
JMSF051H09+           ACCCAGAGCAAGCAAACCTCTGTCAAAAAAGAGAATGATGGCAAGGAATGTGAACAGGAT
                      ____________________________________________________________
consensus             ACCCAGAGCAAGCAAACCTCTGTCAAAAAAGAGAATGATGGCAAGGAATGTGAACAGGAT
 
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rJMSF051H09-          ACCAAAACCAATAAGACCTAACCCAATCTTTTTTTGCTCATCTATTTCATATGCCATGTT
JMFN034I22+           ACCAAAACCAATAAGACCTAACCCAATCTTTTTTTGCTCATCTATTTCATATGCCATGTT
JMSF051H09+           ACCAAAACCAATAAGACCTAACCCAATCTTTTTTTGCTCATCTATTTCATATGCCATGTT
                      ____________________________________________________________
consensus             ACCAAAACCAATAAGACCTAACCCAATCTTTTTTTGCTCATCTATTTCATATGCCATGTT
 
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rJMSF051H09-          GTTGATCCTGCAGGTCCACGGTTAAAACCAGCCAAGCAACACCTCCCAGTCTGACGCCNG
JMFN034I22+           GTTGATCCTGCAGGTCCACGGTTAAAACCAGCCAAGCAACACCTCCCAGTCTGACGCCGG
JMSF051H09+           GTTGATCCTGCAGGTCCACGGTTAAAACCAGCCAAGCAACACCTCCCAGTCTGACGCCGG
                      ____________________________________________________________
consensus             GTTGATCCTGCAGGTCCACGGTTAAAACCAGCCAAGCAACACCTCCCAGTCTGACGCCGG
 
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rJMSF051H09-          TGGAATGATC                                                  
JMFN034I22+           TGGAATGATCCGATTTTCGCTAGAATTCTGGAAGGCAATCTTCAAATCACAATCGAAGAA
JMSF051H09+           TGGAATGATCCGATTTTCGCTAGAATTCTGGAAGGCAATCTTCAAATCACAATCGAAGAA
                      ____________________________________________________________
consensus             TGGAATGATCCGATTTTCGCTAGAATTCTGGAAGGCAATCTTCAAATCACAATCGAAGAA
 
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JMFN034I22+           GTTTCACGCGGCGGGGAGTGGGGGTTGATGGCGAGCAGATGAGAGGAAGACGCTAGTGAG
JMSF051H09+           GTTTCACGCGGCGGGGAGTGGGGGTTGATGGCGAGCAGATGAGAGGAAGACGCTAGTGAG
                      ____________________________________________________________
consensus             GTTTCACGCGGCGGGGAGTGGGGGTTGATGGCGAGCAGATGAGAGGAAGACGCTAGTGAG
 
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JMFN034I22+           G                                                           
JMSF051H09+           GGTATAAGGCTGTGGTCAAGTGGCGGTGCTCGCCAGGGTCAACCTGGACAGATAAAACAA
                      ____________________________________________________________
consensus             GGTATAAGGCTGTGGTCAAGTGGCGGTGCTCGCCAGGGTCAACCTGGACAGATAAAACAA
 
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JMSF051H09+           CCGCTCAGGATGTGCATCGGTCGTCGGGCAATGGCATGACCAGCGCATGTGGTGTCAATC
                      ____________________________________________________________
consensus             CCGCTCAGGATGTGCATCGGTCGTCGGGCAATGGCATGACCAGCGCATGTGGTGTCAATC