Contig 013572:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS151E03+                                                            TCTCTCTCCAG
                      ____________________________________________________________
consensus                                                              TCTCTCTCCAG
 
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JMFS151E03+           AAACCCGTCGCAAGGCTCCGGCTCCGTGTTCGGGTCCCGGTTCTCGACCGGATCGGAAGC
                      ____________________________________________________________
consensus             AAACCCGTCGCAAGGCTCCGGCTCCGTGTTCGGGTCCCGGTTCTCGACCGGATCGGAAGC
 
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JMFS151E03+           CGGAAGTGTCGCTAACCGTTGTAACTCCCCGGAAATGTCGCTGCTGCACGCGGAAAAATC
JMSF050P12+                                       CCGGAAATGTCGCTGCTGCACGCGGAAAAATC
                      ____________________________________________________________
consensus             CGGAAGTGTCGCTAACCGTTGTAACTCCCCGGAAATGTCGCTGCTGCACGCGGAAAAATC
 
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JMFS151E03+           GCTTAAAGCTTGCGATATCTCGAGGTAATTATCTTCTGAACCGGAGCTTTCATTGAATGC
JMSF050P12+           GCTTAAAGCTTGCGATATCTCGAGGTAATTATCTTCTGAACCGGAGCTTTCATTGAATGC
                      ____________________________________________________________
consensus             GCTTAAAGCTTGCGATATCTCGAGGTAATTATCTTCTGAACCGGAGCTTTCATTGAATGC
 
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JMFS151E03+           CGGCTTACTAGCGAGCTCGCCGAGACGGACATCGACAACCGAATCGCTCAGATTCTCGGA
JMSF050P12+           CGGCTTACTAGCGAGCTCGCCGAGACGGACATCGACAACCGAATCGCTCAGATTCTCGGA
                      ____________________________________________________________
consensus             CGGCTTACTAGCGAGCTCGCCGAGACGGACATCGACAACCGAATCGCTCAGATTCTCGGA
 
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JMFS151E03+           TAAATCGCCGGAGTTCTCAGAACCATCCCCGCCGGCTTGATAAAGATTAGACCGGAAAGT
JMFF028O06+                                 CCATCCCCGCCGGCTTGATAAAGATTAGACCGGAAAGT
JMSF050P12+           TAAATCGCCGGAGTTCTCAGAACCATCCCCGCCGGCTTGATAAAGATTAGACCGGAAAGT
                      ____________________________________________________________
consensus             TAAATCGCCGGAGTTCTCAGAACCATCCCCGCCGGCTTGATAAAGATTAGACCGGAAAGT
 
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JMFS151E03+           GCGCATGGAGCGGCCCATAGACCAGTGGATTTTGATGGACGACGGCGGCGGCGGAGTGTA
JMFF028O06+           GCGCATGGAGCGGCCCATAGACCAGTGGATTTTGATGGACGACGGCGGCGGCGGAGTGTA
JMSF050P12+           GCGCATGGAGCGGCCCATAGACCAGTGGATTTTGATGGACGACGGCGGCGGCGGAGTGTA
                      ____________________________________________________________
consensus             GCGCATGGAGCGGCCCATAGACCAGTGGATTTTGATGGACGACGGCGGCGGCGGAGTGTA
 
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JMFS151E03+           GTAGTAACAAGGCCGCGTTTGGCTGAACCTGTTGGAGCTAGAATTCGAGAGAGACCGAGA
JMFF028O06+           GTAGTAACAAGGCCGCGTTTGGCTGAACCTGTTGGAGCTAGAATTCGAGAGAGACCGAGA
JMSF050P12+           GTAGTAACAAGGCCGCGTTTGGCTGAACCTGTTGGAGCTAGAATTCGAGAGAGACCGAGA
                      ____________________________________________________________
consensus             GTAGTAACAAGGCCGCGTTTGGCTGAACCTGTTGGAGCTAGAATTCGAGAGAGACCGAGA
 
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JMFS151E03+           ATCTTCCAGAGAAACCATGATAACAACAACTCACCCAAAGGCTTCAACTTTTTTGTTTGA
JMFF028O06+           ATCTTCCAGAGAAACCATGATAACAACAACTCACCCAAAGGCTTCAACTTTTTTGTTTGA
JMSF050P12+           ATCTTCCAGAGAAACCATGATAACAACAACTCACCCAAAGGCTTCAACTTTTTTGTTTGA
                      ____________________________________________________________
consensus             ATCTTCCAGAGAAACCATGATAACAACAACTCACCCAAAGGCTTCAACTTTTTTGTTTGA
 
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JMFS151E03+           TTTCCAGCTCAAACAAACACTCCAAGATTAAAATTATACAAAATGGGGAAGCGAAATTCT
JMFF028O06+           TTTCCAGCTCAAACAAACACTCCAAGATTAAAATTATACAAAATGGGGAAGCGAAATTCT
JMSF050P12+           TTTCCAGCTCAAACAAACACTCCAAGATTAAAATTATACAAAATGGGCAAGCGAAATTCT
                      ____________________________________________________________
consensus             TTTCCAGCTCAAACAAACACTCCAAGATTAAAATTATACAAAATGGGGAAGCGAAATTCT
 
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JMFS151E03+           TGATCTTGAATGCAAAAATGGGTGGTTTTGGGCACTCAGCGTCGATGAAAGTGGGGTTTG
JMFF028O06+           TGATCTTGAATGCAAAAATGGGTGGTTTTGGGCACTCAGCGTCGATGAAAGTGGGGTTTG
JMSF050P12+           TGATCTTGAATGCAAAAATGGGTGGTTTTGGGCACTCAGCGTCGATGAAAGTGGGGTTTG
                      ____________________________________________________________
consensus             TGATCTTGAATGCAAAAATGGGTGGTTTTGGGCACTCAGCGTCGATGAAAGTGGGGTTTG
 
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JMFS151E03+           CATGA                                                       
JMFF028O06+           CATGACCATAGCCAGGATTTGTGGGCTTTAAGGGAATTTCATGGTGAGGTTTTATGAGGA
JMSF050P12+           CATGACCATAGCCAGGATTTGTGGGCTTTAAGGGAATTTCATGGTGAGGTTTTATGAGGA
                      ____________________________________________________________
consensus             CATGACCATAGCCAGGATTTGTGGGCTTTAAGGGAATTTCATGGTGAGGTTTTATGAGGA
 
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JMFF028O06+           GTTGAGAAGAAGAAGATCAGAGAGAGGACAAAATTGGCTGGGTTTGTGGTGTGGAA    
JMSF050P12+           GTTGAGAAGAAGAAGATCAGAGAGAGGACAAAATTGGCTGGGTTTGTGGTGTGGAAGTCC
                      ____________________________________________________________
consensus             GTTGAGAAGAAGAAGATCAGAGAGAGGACAAAATTGGCTGGGTTTGTGGTGTGGAAGTCC