| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS054C05 | Sequence | 549 | 013571 (5) | emb|CDP05731.1| | 1e-08 | unnamed protein product [Coffea canephora] | |||||
| JMFS152F07 | Sequence | 616 | 013571 (5) | ref|XP_004244107.1| | 71.2 | PREDICTED: uncharacterized protein LOC101245078 [Solanum lycopersicum] | |||||
| JMFS167D01 | Sequence | 615 | 013571 (5) | emb|CDP05731.1| | 1e-08 | unnamed protein product [Coffea canephora] | |||||
| JMSF026E16 | Sequence | 625 | 013571 (5) | emb|CDP05731.1| | 1e-08 | unnamed protein product [Coffea canephora] | 749 | 001380 (2) | ref|XP_009606070.1| | 117 | PREDICTED: uncharacterized protein LOC104100523 [Nicotiana tomentosiformis] |
| JMSF050O07 | Sequence | 662 | 013571 (5) | emb|CDP05731.1| | 2e-08 | unnamed protein product [Coffea canephora] | 710 | 001380 (2) | ref|XP_009606070.1| | 114 | PREDICTED: uncharacterized protein LOC104100523 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
JMFS152F07+ CATAAATATCTTTCTTCTGAAGCTTATTGAGGATCAATTCTAATGTCTTCTTATCTGGC
JMFS167D01+ TTCTTCTGAAGCTANTTGAGGATCAATTCTAATGTCTTCTTATCTGGC
JMSF026E16+ TCTGAAGCTTATTGAGGATCAATTCTAATGTCTTCTTATCTGGC
JMSF050O07+ GC
____________________________________________________________
consensus CATAAATATCTTTCTTCTGAAGCTTATTGAGGATCAATTCTAATGTCTTCTTATCTGGC
. : . : . : . : . : . :
JMFS152F07+ AATGGATGCTCTGATAATGTCCCTGACGTAGTGGTAACTGTTTTCCTCTCCGGCTTTCTT
JMFS054C05+ TGCTCTGATAATGTCCCTGACGTAGTGGTAACTGTTTTCCTCTCCGGCTTTCTT
JMFS167D01+ AATGGATGCTCTGATAATGTCCCTGACGTAGTGGTAACTGTTTTCCTCTCCGGCTTTCTT
JMSF026E16+ AATGGATGCTCTGATAATGTCCCTGACGTAGTGGTAACTGTTTTCCTCTCCGGCTTTCTT
JMSF050O07+ AATGGATGCTCTGATAATGTCCCTGACGTAGTGGTAACTGTTTTCCTCTCCGGCTTTCTT
____________________________________________________________
consensus AATGGATGCTCTGATAATGTCCCTGACGTAGTGGTAACTGTTTTCCTCTCCGGCTTTCTT
. : . : . : . : . : . :
JMFS152F07+ CCTCGTACCTCATCGCCATCATTTTCGATATCGCCATCATCGCCGCCGCCGTCATTTTCC
JMFS054C05+ CCTCGTACCTCATCGCCATCATTTTCGATATCGCCATCATCGCCGCCGCCGTCATTTTCC
JMFS167D01+ CCTCGTACCTCATCGCCATCATTTTCGATATCGCCATCATCGCCGCCGCCGTCATTTTCC
JMSF026E16+ CCTCGTACCTCATCGCCATCATTTTCGATATCGCCATCATCGCCGCCGCCGTCATTTTCC
JMSF050O07+ CCTCGTACCTCATCGCCATCATTTTCGATATCGCCATCATCGCCGCCGCCGTCATTTTCC
____________________________________________________________
consensus CCTCGTACCTCATCGCCATCATTTTCGATATCGCCATCATCGCCGCCGCCGTCATTTTCC
. : . : . : . : . : . :
JMFS152F07+ TCGTATTCTTCATCGACCTCACCGTCGCCGTCGATTTTCCTAATCTTCGATGGCTTGCCG
JMFS054C05+ TCGTATTCTTCATCGACCTCACCGTCGCCGTCGATTTTCCTAATCTTCGATGGCTTGCCG
JMFS167D01+ TCGTATTCTTCATCGACCTCACCGTCGCCGTCGATTTTCCTAATCTTCGATGGCTTGCCG
JMSF026E16+ TCGTATTCTTCATCGACCTCACCGTCGCCGTCGATTTTCCTAATCTTCGATGGCTTGCCG
JMSF050O07+ TCGTATTCTTCATCGACCTCACCGTCGCCGTCGATTTTCCTAATCTTCGATGGCTTGCCG
____________________________________________________________
consensus TCGTATTCTTCATCGACCTCACCGTCGCCGTCGATTTTCCTAATCTTCGATGGCTTGCCG
. : . : . : . : . : . :
JMFS152F07+ CCGTCAGCAAAGTCGGAGGAAGATCCAGACGCGGTAGGCGCGTGACGTACGTGCCGAGTC
JMFS054C05+ CCGTCAGCAAAGTCGGAGGAAGATCCAGACGCGGTAGGCGCGTGACGTACGTGCCGAGTC
JMFS167D01+ CCGTCAGCAAAGTCGGAGGAAGATCCAGACGCGGTAGGCGCGTGACGTACGTGCCGAGTC
JMSF026E16+ CCGTCAGCAAAGTCGGAGGAAGATCCAGACGCGGTAGGCGCGTGACGTACGTGCCGAGTC
JMSF050O07+ CCGTCAGCAAAGTCGGAGGAAGATCCAGACGCGGTAGGCGCGTGACGTACGTGCCGAGTC
____________________________________________________________
consensus CCGTCAGCAAAGTCGGAGGAAGATCCAGACGCGGTAGGCGCGTGACGTACGTGCCGAGTC
. : . : . : . : . : . :
JMFS152F07+ GGACTCGGTGTCGACTCAGCCACGCCGCCGCCGCTACCTTCCATGTTTTGGAGCTTAAGT
JMFS054C05+ GGACTCGGTGTNGANTCAGCCACGCCGCCGCCGCTACCTTCCATGTTTTGGAGCTTAAGT
JMFS167D01+ GGACTCGGTGTCGACTCAGCCACGCCGCCGCCGCTACCTTCCATGTTTTGGAGCTTAAGT
JMSF026E16+ GGACTCGGTGTCGACTCAGCCACGCCGCCGCCGCTACCTTCCATGTTTTGGAGCTTAAGT
JMSF050O07+ GGACTCGGTGTCGACTCAGCCACGCCGCCGCCGCTACCTTCCATGTTTTGGAGCTTAAGT
____________________________________________________________
consensus GGACTCGGTGTCGACTCAGCCACGCCGCCGCCGCTACCTTCCATGTTTTGGAGCTTAAGT
. : . : . : . : . : . :
JMFS152F07+ AAGAGCTCGAGCTTCTTCTCCCTCCTGCTCTCGTCCTCCTCCTCCTCGTCCACCAAGTAC
JMFS054C05+ AAGAGCTCGAGCTTCTTNTCCCTCGGGCTCTGGTCCTCCTCCTCCTCGTCCACCAAGTAC
JMFS167D01+ AAGAGCTCGAGCTTCTTCTCCCTCCTGCTCTCGTCCTCCTCCTCCTCGTCCACCAAGTAC
JMSF026E16+ AAGAGCTCGAGCTTCTTCTCCCTCCTGCTCTCGTCCTCCTCCTCCTCGTCCACCAAGTAC
JMSF050O07+ AAGAGCTCGAGCTTCTTCTCCCTCCTGCTCTCGTCCTCCTCCTCCTCGTCCACCAAGTAC
____________________________________________________________
consensus AAGAGCTCGAGCTTCTTCTCCCTCCTGCTCTCGTCCTCCTCCTCCTCGTCCACCAAGTAC
. : . : . : . : . : . :
JMFS152F07+ TCGTCGTCATCGTCGAGGTAATCGTCGATGTCAAAACAGTACCTGACATTCCGCCGCCGG
JMFS054C05+ TCGTCGTCATCGTCGAGGTAATCGTCGATGTCAAAACAGTACCTGACATTCCGCCGCCGG
JMFS167D01+ TCGTCGTCATCGTCGAGGTAATCGTCGATGTCAAAACAGTACCTGACATTCCGCCGCCGG
JMSF026E16+ TCGTCGTCATCGTCGAGGTAATCGTCGATGTCAAAACAGTACCTGACATTCCGCCGTCGG
JMSF050O07+ TCGTCGTCATCGTCGAGGTAATCGTCGATGTCAAAACAGTACCTGACATTCCGCCGCCGG
____________________________________________________________
consensus TCGTCGTCATCGTCGAGGTAATCGTCGATGTCAAAACAGTACCTGACATTCCGCCGCCGG
. : . : . : . : . : . :
JMFS152F07+ CCGCTCCGCCGGAGCTCTCCGTCCGACTTCTCCGCGGCGGAACCGGAGCTACGGCGCGCG
JMFS054C05+ CCGCTCCGCCGGAGCTCTCCGTCCGACTTCTCCGCGGCGGAACCGGAGCTACGGCGCGCG
JMFS167D01+ CCGCTCCGCCGGAGCTCTCCGTCCGACTTCTCCGCGGCGGAACCGGAGCTACGGCGCGCG
JMSF026E16+ CCGCTCCGCCGGAGCTCTCCGTCCGACTTCTCCGCGGCGGAACCGGAGCTACGGCGCGCG
JMSF050O07+ CCGCTCCGCCGGAGCTCTCCGTCCGACTTCTCCGCGGCGGAACCGGAGCTACGGCGCGCG
____________________________________________________________
consensus CCGCTCCGCCGGAGCTCTCCGTCCGACTTCTCCGCGGCGGAACCGGAGCTACGGCGCGCG
. : . : . : . : . : . :
JMFS152F07+ GCGAGATCTGCCTTCGACGGACGCCCCTTCTTCCTCTTCTTCACGATCTGTCCCATATTG
JMFS054C05+ GCGAGATCTGCCTTCGACGGACGCCCCTTCTTCCTCTTCTTCACGATCTGTCCCATATTG
JMFS167D01+ GCGAGATCTGCCTTCGACGGACGCCCCTTCTTCCTCTTCTTCACGATCTGTCCCATATTG
JMSF026E16+ GCGAGATCTGCCTTCGACGGACGCCCCTTCTTCCTCTTCTTCACGATCTGTCCCATATTG
JMSF050O07+ GCGAGATCTGCCTTCGACGGACGCCCCTTCTTCCTCTTCTTCACGATCTGTCCCATATTG
____________________________________________________________
consensus GCGAGATCTGCCTTCGACGGACGCCCCTTCTTCCTCTTCTTCACGATCTGTCCCATATTG
. : . : . : . : . : . :
JMFS152F07+ TTCGGACTTCGGAGTTC
JMFS054C05+ TTCGGACTTCGGAGT
JMFS167D01+ TTCGGACTTCGGAGTTC
JMSF026E16+ TTCGGACTTCGGAGTTCTCTCTCTCTAGAAAAAATACCTCC
JMSF050O07+ TTCGGACTTCGGAGTTCTCTCTCTCTAGAAAAAATACCTCCCTTTCTCTCTCTTCTTTTT
____________________________________________________________
consensus TTCGGACTTCGGAGTTCTCTCTCTCTAGAAAAAATACCTCCCTTTCTCTCTCTTCTTTTT
. : . : . : . : . : . :
JMSF050O07+ CCACTCAATTATTATTGCATCTGCCTGAGCCTGAGGGTTCGCTTTGGCTTTTTTCGGCTC
____________________________________________________________
consensus CCACTCAATTATTATTGCATCTGCCTGAGCCTGAGGGTTCGCTTTGGCTTTTTTCGGCTC