| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF046O08 | Sequence | 549 | 013570 (4) | ref|XP_009767909.1| | 6e-68 | PREDICTED: uncharacterized protein LOC104218977 isoform X1 [Nicotiana sylvestri | 396 | 002701 (5) | ref|XP_009767910.1| | 3e-19 | PREDICTED: uncharacterized protein LOC104218977 isoform X2 [Nicotiana sylvestri |
| JMFS042C04 | Sequence | 635 | 013570 (4) | ref|XP_009767909.1| | 9e-86 | PREDICTED: uncharacterized protein LOC104218977 isoform X1 [Nicotiana sylvestri | |||||
| JMSF040B21 | Sequence | 577 | 013570 (4) | ref|XP_009767909.1| | 2e-69 | PREDICTED: uncharacterized protein LOC104218977 isoform X1 [Nicotiana sylvestri | 813 | 002701 (5) | ref|XP_009767910.1| | 5e-107 | PREDICTED: uncharacterized protein LOC104218977 isoform X2 [Nicotiana sylvestri |
| JMSF050K03 | Sequence | 702 | 013570 (4) | ref|XP_009767909.1| | 3e-86 | PREDICTED: uncharacterized protein LOC104218977 isoform X1 [Nicotiana sylvestri | 769 | 002701 (5) | ref|XP_009767910.1| | 2e-88 | PREDICTED: uncharacterized protein LOC104218977 isoform X2 [Nicotiana sylvestri |
This contig is upended
. : . : . : . : . : . :
JMSF040B21+ CTTCTGCGGGA
JMFS042C04+ GATTCAATCTCATTAAGGTCTTCTGCGGGA
JMSF050K03+ TCCACTTGTGTGGATTCAATCTCATTAAGGTCTTCTGCGGGA
____________________________________________________________
consensus TCCACTTGTGTGGATTCAATCTCATTAAGGTCTTCTGCGGGA
. : . : . : . : . : . :
JMSF040B21+ TCTTCATGAAATATGGCACCTTGAAATATATTCACATCAGCCATGACATCCTTGTACTGT
JMFS042C04+ TCTTCATGAAATATGGCACCTTGAAATATATTCACATCAGCCATGACATCCTTGTACTGT
JMSF050K03+ TCTTCATGAAATATGGCACCTTGAAATATATTCACATCAGCCATGACATCCTTGTACTGT
____________________________________________________________
consensus TCTTCATGAAATATGGCACCTTGAAATATATTCACATCAGCCATGACATCCTTGTACTGT
. : . : . : . : . : . :
JMSF040B21+ TTTGTCCCAATGAAAGAAGCAAACAATGTGTCACCCGCTTCAGNTAGTAAATACCTGTGT
JMFS042C04+ TTTGTCCCAATGAAAGAAGCAAACAATGTGTCACCCGCTTCAGCTAGTAAATACCTGTGT
JMFF046O08+ TTGTCCCAATGAAAGAAGCAAACAATGTGTCACCCGCTTCAGCTAGTAAATACCTGTGT
JMSF050K03+ TTTGTCCCAATGAAAGAAGCAAACAATGTGTCACCCGCTTCAGCTAGTAAATACCTGTGT
____________________________________________________________
consensus TTTGTCCCAATGAAAGAAGCAAACAATGTGTCACCCGCTTCAGCTAGTAAATACCTGTGT
. : . : . : . : . : . :
JMSF040B21+ GGAACATGATCTGAAGAGGGTTGAACACGTTCTATGGAGATAACATTTTCTCCAAAGTCA
JMFS042C04+ GGAACATGATCTGAAGAGGGTTGAACACGTTCTATGGAGATAACATTTTCTCCAAAGTCA
JMFF046O08+ GGAACATGATCTGAAGAGGGTTGAACACGTTCTATGGAGATAACATTTTCTCCAAAGTCA
JMSF050K03+ GGAACATGATCTGAAGAGGGTTGAACACGTTCTATGGAGATAACATTTTCTCCAAAGTCA
____________________________________________________________
consensus GGAACATGATCTGAAGAGGGTTGAACACGTTCTATGGAGATAACATTTTCTCCAAAGTCA
. : . : . : . : . : . :
JMSF040B21+ GCNTTAAACTTGTTCACTGCTNGTATCACTTCAGTAGCAGGTTTCTNGTAAACACACTCG
JMFS042C04+ GCCTTAAACTTGTTCACTGCTCGTATCACTTCAGTAGCAGGTTTCTTGTAAACACACTCG
JMFF046O08+ GCCTTAAACTTGTTCACTGCTCGTATCACTTCAGTAGCAGGTTTCTTGTAAACACACTCG
JMSF050K03+ GCCTTAAACTTGTTCACTGCTCGTATCACTTCAGTAGCAGGTTTCTTGTAAACACACTCG
____________________________________________________________
consensus GCCTTAAACTTGTTCACTGCTCGTATCACTTCAGTAGCAGGTTTCTTGTAAACACACTCG
. : . : . : . : . : . :
JMSF040B21+ GAGAGCACCATGCAGCAAAGGATGTCCTGCAAATCGGGTACCGATTCGGCTTTAACGGCG
JMFS042C04+ GAGAGCACCATGCAGCAAAGGATGTCCTGCAAATCGGGTACCGATTCGGCTTTAACGGCG
JMFF046O08+ GAGAGCACCATGCAGCAAAGGATGTCCTGCAAATCGGGTACCGATTCGGCTTTAACGGCG
JMSF050K03+ GAGAGCACCATGCAGCAAAGGATGTCCTGCAAATCGGGTACCGATTCGGCTTTAACGGCG
____________________________________________________________
consensus GAGAGCACCATGCAGCAAAGGATGTCCTGCAAATCGGGTACCGATTCGGCTTTAACGGCG
. : . : . : . : . : . :
JMSF040B21+ TAGCAGAGATCCTTGAGCTGCTTCTTCCTCCGCTCATACTCCTCNNGAATTCGCTTCCTC
JMFS042C04+ TAGCAGAGATCCTTGAGCTGCTTCTTCCTCCGCTCATACTCCTCCTGAATTCGCTTCCTC
JMFF046O08+ TAGCAGAGATCCTTGAGCTGCTTCTTCCTCCGCTCATACTCCTCCTGAATTCGCTTCCTC
JMSF050K03+ TAGCAGAGATCCTTGAGCTGCTTCTTCCTCCGCTCATACTCCTCCTGAATTCGCTTCCTC
____________________________________________________________
consensus TAGCAGAGATCCTTGAGCTGCTTCTTCCTCCGCTCATACTCCTCCTGAATTCGCTTCCTC
. : . : . : . : . : . :
JMSF040B21+ TGTACNTTGCNGTCGCCCCAAGGCCANTTAACCACCATTCGCCACTGCAGTGGCTGCCGC
JMFS042C04+ TGTACCTTGCCGTCGCCCCAAGGCCACTTAACCACCATTCGCCACTGCAGTGGCTGCCGC
JMFF046O08+ TGTACCTTGCCGTCGCCCCAAGGCCACTTAACCACCATTCGCCACTGCAGTGGCTGCCGC
JMSF050K03+ TGTACCTTGCCGTCGCCCCAAGGCCACTTAACCACCATTCGCCACTGCAGTGGCTGCCGC
____________________________________________________________
consensus TGTACCTTGCCGTCGCCCCAAGGCCACTTAACCACCATTCGCCACTGCAGTGGCTGCCGC
. : . : . : . : . : . :
JMSF040B21+ GTGAGGCTCAGGATCCTGGCACTNTGGTCTTTGATCCATGTCTCTACTCGCCGAGGCAAA
JMFS042C04+ GTGAGGCTCAGGATCCTGGCACTCTGGTCTTTGATCCATGTCTCTACTCGCCGAGGCAAA
JMFF046O08+ GTGAGGCTCAGGATCCTGGCACTCTGGTCTTTGATCCATGTCTCTACTCGCCGAGGCAAA
JMSF050K03+ GTGAGGCTCAGGATCCTGGCACTCTGGTCTTTGATCCATGTCTCTACTCGCCGAGGCAAA
____________________________________________________________
consensus GTGAGGCTCAGGATCCTGGCACTCTGGTCTTTGATCCATGTCTCTACTCGCCGAGGCAAA
. : . : . : . : . : . :
JMSF040B21+ GCCTCCATCATTCCCCCATATACACCTGGGAAATCAAAGTCCTACTCCCGTCGGCCGCCG
JMFS042C04+ GCCTCCATCATTCCCCCATATACACCTGGGAAATCAAAGTCCTACTCCCGTCGGCCGCCG
JMFF046O08+ GCCTCCATCATTCCCCCATATACACCTGGGAAATCAAAGTCCTACTCCCGTCGGCCGCCG
JMSF050K03+ GCCTCCATCATTCCCCCATATACACCTGGGAAATCAAAGTCCTACTCCCGTCGGCCGCCG
____________________________________________________________
consensus GCCTCCATCATTCCCCCATATACACCTGGGAAATCAAAGTCCTACTCCCGTCGGCCGCCG
. : . : . : . : . : . :
JMSF040B21+ TGCAGAAGTGGAGAGGAAAAGATC
JMFS042C04+ TGCAGAAGTGGAGAGGAAAAGATCTGAAGCTTTTTGTGGACGCTTTTGCGTTTAAGAAAT
JMFF046O08+ TGCAGAAGTGGAGAGGAAAAGATCTGAAGCTTTTTGTGGACGCTTTTGCGTTTAAGAAAT
JMSF050K03+ TGCAGAAGTGGAGAGGAAAAGATCTGAAGCTTTTTGTGGACGCTTTTGCGTTTAAGAAAT
____________________________________________________________
consensus TGCAGAAGTGGAGAGGAAAAGATCTGAAGCTTTTTGTGGACGCTTTTGCGTTTAAGAAAT
. : . : . : . : . : . :
JMFS042C04+ ATCGG
JMFF046O08+ ATCGG
JMSF050K03+ ATCGGACGGCGAATCAGAATGCTATCGGCAGAGCATATGCCGAAAACTTACACCCTGGTC
____________________________________________________________
consensus ATCGGACGGCGAATCAGAATGCTATCGGCAGAGCATATGCCGAAAACTTACACCCTGGTC