| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF026P13 | Sequence | 501 | 013565 (8) | emb|CDP04914.1| | 6e-58 | unnamed protein product [Coffea canephora] | 764 | 013802 (4) | ref|XP_009601820.1| | 4e-60 | PREDICTED: alanine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_03133} [Nicotiana to |
| JMFF037L07 | Sequence | 595 | 013565 (8) | ref|XP_008461868.1| | 1e-81 | PREDICTED: alanine--tRNA ligase-like [Cucumis melo] | 758 | 013802 (4) | ref|XP_009601820.1| | 1e-61 | PREDICTED: alanine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_03133} [Nicotiana to |
| JMFF042P18 | Sequence | 646 | 013565 (8) | ref|XP_008461868.1| | 3e-84 | PREDICTED: alanine--tRNA ligase-like [Cucumis melo] | 560 | 013802 (4) | ref|XP_006347609.1| | 4e-38 | PREDICTED: alanine--tRNA ligase-like [Solanum tuberosum] |
| JMFS039C03 | Sequence | 625 | 013565 (8) | ref|XP_008461868.1| | 1e-74 | PREDICTED: alanine--tRNA ligase-like [Cucumis melo] | |||||
| JMFS051F11 | Sequence | 589 | 013565 (8) | ref|XP_008461868.1| | 2e-82 | PREDICTED: alanine--tRNA ligase-like [Cucumis melo] | |||||
| JMFS130B04 | Sequence | 626 | 013565 (8) | ref|XP_008461868.1| | 6e-74 | PREDICTED: alanine--tRNA ligase-like [Cucumis melo] | |||||
| JMFS149B04 | Sequence | 624 | 013565 (8) | ref|XP_008461868.1| | 6e-74 | PREDICTED: alanine--tRNA ligase-like [Cucumis melo] | |||||
| JMSF050B10 | Sequence | 669 | 013565 (8) | ref|XP_008461868.1| | 1e-80 | PREDICTED: alanine--tRNA ligase-like [Cucumis melo] | 802 | 013802 (4) | ref|XP_009601820.1| | 3e-62 | PREDICTED: alanine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_03133} [Nicotiana to |
This contig is upended
. : . : . : . : . : . :
JMFS051F11+ CACCCCCAA
JMFF042P18+ ACTGAGCCAAATTCTCTAGCTTCATTATCAGGTGGAAGGCCATTTTCTCATCACCCCCAA
JMFF037L07+ ACCCCCAA
JMSF050B10+ ACCCCCAA
____________________________________________________________
consensus ACTGAGCCAAATTCTCTAGCTTCATTATCAGGTGGAAGGCCATTTTCTCATCACCCCCAA
. : . : . : . : . : . :
JMFS051F11+ AATAAGTAGCATAAATCCGAATAGCAGGTAGCTTATATACCTCAGTGAGAAGTTCCCAGG
JMFF042P18+ AATAAGTAGCATAAATCCGAATAGCAGGTAGCTTATATACCTCAGTGAGAAGTTCCCAGG
JMFS130B04+ AATAGCAGGTAGCTTATATACCTCAGTGAGAAGTTCCCAGG
JMFS149B04+ CGAATAGCAGGTAGCTTATATACCTCAGTGAGAAGTTCCCAGG
JMFS039C03+ TCCGAATAGCAGGTAGCTTATATACCTCAGTGAGAAGTTCCCAGG
JMFF037L07+ AATAAGTAGCATAAATCCGAATAGCAGGTAGCTTATATACCTCAGTGAGAAGTTCCCAGG
JMSF050B10+ AATAAGTAGCATAAATCCGAATAGCAGGTAGCTTATATACNTCAGTGAGAAGTTCCCAGG
____________________________________________________________
consensus AATAAGTAGCATAAATCCGAATAGCAGGTAGCTTATATACCTCAGTGAGAAGTTCCCAGG
. : . : . : . : . : . :
JMFS051F11+ CCCACTGAATTGCCTCTGTTTTAAAATAATCACCAAAGGACCAATTTCCAAGCATCTCAA
JMFF042P18+ CCCACTGAATTGCCTCTGTTTTAAAATAATCACCAAAGGACCAATTTCCAAGCATCTCAA
JMFF026P13+ ACCAATTTCCAAGCATCTCAA
JMFS130B04+ CCCACTGAATGCCCTCTGTTTTAAAATAATCACCAAAGGACCAATTTCCAAGCATCTCAA
JMFS149B04+ CCCACTGAATGCCCTCTGTTTTAAAATAATCACCAAAGGACCAATTTCCAAGCATCTCAA
JMFS039C03+ CCCACTGAATTGCCTCTGTTTTAAAATAATCACCAAAGGACCAATTTCCAAGCATCTCAA
JMFF037L07+ CCCACTGAATTGCCTCTGTTTTAAAATAATCACCAAAGGACCAATTTCCAAGCATCTCAA
JMSF050B10+ CCCACTGAATTGCCTCTGTTTTAAAATAATCACCAAAGGACCAATTTCCAAGCATCTCAA
____________________________________________________________
consensus CCCACTGAATTGCCTCTGTTTTAAAATAATCACCAAAGGACCAATTTCCAAGCATCTCAA
. : . : . : . : . : . :
JMFS051F11+ AGAAAGTGTGGTGATAAGTGTCCTTGCCAACATCATCAAGATCATTGTGCTTGCCACCAG
JMFF042P18+ AGAAAGTGTGGTGATAAGTGTCCTTGCCAACATCATCAAGATCATTGTGCTTGCCACCAG
JMFF026P13+ AGAAAGTGTGGTGATAAGTGTCCTTGCCAACATCATCAAGATCATTGTGCTTGCCACCAG
JMFS130B04+ AGAAAGTGTGGTGATAAGTGTCCTTGCCAACATCATCAAGATCATTGTGCTTGCCACCAG
JMFS149B04+ AGAAAGTGTGGTGATAAGTGTCCTTGCCAACATCATCAAGATCATTGTGCTTGCCACCAG
JMFS039C03+ AGAAAGTGTGGTGATAAGTGTCCTTGCCAACATCATCAAGATCATTGTGCTTGCCACCAG
JMFF037L07+ AGAAAGTGTGGTGATAAGTGTCCTTGCCAACATCATCAAGATCATTGTGCTTGCCACCAG
JMSF050B10+ AGAAAGTGTGGTGATAAGTGTCCTTGCCAACATCATCAAGATCATTGTGCTTGCCACCAG
____________________________________________________________
consensus AGAAAGTGTGGTGATAAGTGTCCTTGCCAACATCATCAAGATCATTGTGCTTGCCACCAG
. : . : . : . : . : . :
JMFS051F11+ CTCTAATGCACTTCTGGGTGTCACAAGCACGCTTCAGTTTGCTCAATTCAGTGTTTGGAT
JMFF042P18+ CTCTAATGCACTTCTGGGTGTCACAAGCACGCTTCAGTTTGCTCAATTCAGTGTTTGGAT
JMFF026P13+ CTCTAATGCACTTCTGGGTGTCACAAGCACGCTTCAGTTTGCTCAATTCAGTGTTTGGAT
JMFS130B04+ CTCTAATGCACTTCTGGGTGTCACAAGCACGCTTCAGTTTGCTCAATTCAGTGTTTGGAT
JMFS149B04+ CTCTAATGCACTTCTGGGTGTCACAAGCACGCTTCAGTTTGCTCAATTCAGTGTTTGGAT
JMFS039C03+ CTCTAATGCACTTCTGGGTGTCACAAGCACGCTTCAGTTTGCTCAATTCAGTGTTTGGAT
JMFF037L07+ CTCTAATGCACTTCTGGGTGTCACAAGCACGCTTCAGTTTGCTCAATTCAGTGTTTGGAT
JMSF050B10+ CTCTAATGCACTTCTGGGTGTCACAAGCACGCTTCAGTTTGCTCAATTCAGTGTTTGGAT
____________________________________________________________
consensus CTCTAATGCACTTCTGGGTGTCACAAGCACGCTTCAGTTTGCTCAATTCAGTGTTTGGAT
. : . : . : . : . : . :
JMFS051F11+ CAACTGTTCCTAAGAAGATGGGCTTAAACTGATTCATACCAGCATTAGCGAAGAGGAGGG
JMFF042P18+ CAACTGTTCCTAAGAAGATGGGCTTAAACTGATTCATACCAGCATTAGCGAAGAGGAGGG
JMFF026P13+ CAACTGTTCCTAAGAAGATGGGCTTAAACTGATTCATACCAGCATTAGCGAAGAGGAGGG
JMFS130B04+ CAACTGTTCCTAAGAAGATGGGCTTAAACTGATTCATACCAGCATTAGCGAAGAGGAGGG
JMFS149B04+ CAACTGTTCCTAAGAAGATGGGCTTAAACTGATTCATACCAGCATTAGCGAAGAGGAGGG
JMFS039C03+ CAACTGTTCCTAAGAAGATGGGCTTAAACTGATTCATACCAGCATTAGCGAAGAGGAGGG
JMFF037L07+ CAACTGTTCCTAAGAAGATGGGCTTAAACTGATTCATACCAGCATTAGCGAAGAGGAGGG
JMSF050B10+ CAACTGTTCCTAAGAAGATGGGCTTAAACTGATTCATACCAGCATTAGCGAAGAGGAGGG
____________________________________________________________
consensus CAACTGTTCCTAAGAAGATGGGCTTAAACTGATTCATACCAGCATTAGCGAAGAGGAGGG
. : . : . : . : . : . :
JMFS051F11+ TAGGATCATTGACAGGAACAACGGGGCTTGACTTGACGCAGGTGTGAGCCTTGCTTTCGA
JMFF042P18+ TAGGATCATTGACAGGAACAACGGGGCTTGACTTGACGCAGGTGTGAGCCTTGCTTTCGA
JMFF026P13+ TAGGATCATTGACAGGAACAACGGGGCTTGACTTGACGCAGGTGTGAGCCTTGCTTTCGA
JMFS130B04+ TAGGATCATTGACAGGAACAACGGGGCTTGACTTGACGCAGGTGTGAGCCTTGCTTTCGA
JMFS149B04+ TAGGATCATTGACAGGAACAACGGGGCTTGACTTGACGCAGGTGTGAGCCTTGCTTTCGA
JMFS039C03+ TAGGATCATTGACAGGAACAACGGGGCTTGACTTGACGCAGGTGTGAGCCTTGCTTTCGA
JMFF037L07+ TAGGATCATTGACAGGAACAACGGGGCTTGACTTGACGCAGGTGTGAGCCTTGCTTTCGA
JMSF050B10+ TAGGATCATTGACAGGAACAACGGGGCTTGACTTGACGCAGGTGTGAGCCTTGCTTTCGA
____________________________________________________________
consensus TAGGATCATTGACAGGAACAACGGGGCTTGACTTGACGCAGGTGTGAGCCTTGCTTTCGA
. : . : . : . : . : . :
JMFS051F11+ AGAACTTGATGAAAGTGTCCCGGACCTTGCTGGACGGCCACTCCAATCCCGCCATCTCTT
JMFF042P18+ AGAACTTGATGAAAGTGTCCCGGACCTTGCTGGACGGCCACTCCAATCCCGCCATCTCTT
JMFF026P13+ AGAACTTGATGAAAGTGTCCCGGACCTTGCTGGACGGCCACTCCAATCCCGCCATCTCTT
JMFS130B04+ AGAACTTGATGAAAGTGTCCCGGACCTTGCTGGACGGCCACTCCAATCCCGCCATCTCTT
JMFS149B04+ AGAACTTGATGAAAGTGTCCCGGACCTTGCTGGACGGCCACTCCAATCCCGCCATCTCTT
JMFS039C03+ AGAACTTGATGAAAGTGTCCCGGACCTTGCTGGACGGCCACTCCAATCCCGCCATCTCTT
JMFF037L07+ AGAACTTGATGAAAGTGTCCCGGACCTTGCTGGACGGCCACTCCAATCCCGCCATCTCTT
JMSF050B10+ AGAACTTGATGAAAGTGTCCCGGACCTTGCTGGACGGCCACTCCAATCCCGCCATCTCTC
____________________________________________________________
consensus AGAACTTGATGAAAGTGTCCCGGACCTTGCTGGACGGCCACTCCAATCCCGCCATCTCTT
. : . : . : . : . : . :
JMFS051F11+ GCTGCTGCTGAGAGACCACAGATGGGATAGAAGTCGATGGCGATGGAGAGAAATGGCGTC
JMFF042P18+ GCTGCTGCTGAGAGACCACAGATGGGATAGAAGTCGATGGCGATGGAGAGAAATGGCGTC
JMFF026P13+ GCTGCTGCTGAGAGACCACAGATGGGATAGAAGTCGATGGCGATGGAGAGAAATGGCGTC
JMFS130B04+ GCTGCTGCTGAGAGACCACAGATGGGATAGAAGTCGATGGCGATGGAGAGAAATGGCGTC
JMFS149B04+ GCTGCTGCTGAGAGACCACAGATGGGATAGAAGTCGATGGCGATGGAGAGAAATGGCGTC
JMFS039C03+ GCTGCTGCTGAGAGACCACAGATGGGATAGAAGTCGATGGCGATGGAGAGAAATGGCGTC
JMFF037L07+ GCTGCTGCTGAGAGACCACAGATGGGATAGAAGTCGATGGCGATGGAGAGAAATGGCGTC
JMSF050B10+ GCTGCTGCTGAGAGACCACAGATGGGATAGAAGTCGATGGCGATGGAGAGAAATGGCGTC
____________________________________________________________
consensus GCTGCTGCTGAGAGACCACAGATGGGATAGAAGTCGATGGCGATGGAGAGAAATGGCGTC
. : . : . : . : . : . :
JMFS051F11+ GTCGGAGAAGAGTATCTAACGGCGGCACTGCGGCGGCGTAGGTAGGGTAGTGAGAAGAGG
JMFF042P18+ GTCGGAGAAGAGTATCTAACGGCGGCACTGCGGCGGCGTAGGTAGGGTAGTGAGAAGAGG
JMFF026P13+ GTCGGAGAAGAGTATCTAACGGCGGCACTGCGGCGGCGTAGGTAGGGTAGTGAGAAGAGG
JMFS130B04+ GTCGGAGAAGAGTATCTAACGGCGGCACTGCGGCGGCGTAGGTAGGGTAGTGAGAAGAGG
JMFS149B04+ GTCGGAGAAGAGTATCTAACGGCGGCACTGCGGCGGCGTAGGTAGGGTAGTGAGAAGAGG
JMFS039C03+ GTCGGAGAAGAGTATCTAACGGCGGCACTGCGGCGGCGTAGGTAGGGTAGTGAGAAGAGG
JMFF037L07+ GTCGGAGAAGAGTATCTAACGGCGGCACTGCGGCGGCGTAGGTAGGGTAGTGAGAAGAGG
JMSF050B10+ GTCGGAGAAGAGTATCTAACGGCGGCACTGCGGCGGCGTAGGTAGGGTAGTGAGAAGAGG
____________________________________________________________
consensus GTCGGAGAAGAGTATCTAACGGCGGCACTGCGGCGGCGTAGGTAGGGTAGTGAGAAGAGG
. : . : . : . : . : . :
JMFS051F11+ AAGACGGCGGAGGCGCTCTGGCGAAATTTAATACTC
JMFF042P18+ AAGACGGCGGAGGCGCTCTGGCGAAATTTAATACTCTTCTGCCAAC
JMFF026P13+ AAGACGGCGGAGGCGCTCTGGCGAAATTTAATACTCTTCTGCCAACTGGTGAAGCCAAAG
JMFS130B04+ AAGACGGCGGAGGCGCTCTGGCGAAATTTAATACTCTTCTGCCAACTGGTGAAGCCAAAG
JMFS149B04+ AAGACGGCGGAGGCGCTCTGGCGAAATTTAATACTCTTCTGCCAACTGGTGAAGCCAAAG
JMFS039C03+ AAGACGGCGGAGGCGCTCTGGCGAAATTTAATACTCTTCTGCCAACTGGT-AAGCCAAAG
JMFF037L07+ AAGACGGCGGAGGCGCTCTGGCGAAATTTAATACTCTTCTGCCAACT
JMSF050B10+ AAGACGGCGGAGGCGCTCTGGCGAAATTTAATACTCTTCTGCCAACTGGTGAAGCCAAAG
____________________________________________________________
consensus AAGACGGCGGAGGCGCTCTGGCGAAATTTAATACTCTTCTGCCAACTGGTGAAGCCAAAG
. : . : . : . : . : . :
JMFS130B04+ CAAAACGGAGGCAGCTATAGCTTCCTACGGTGTAAACCCTC
JMFS149B04+ CAAAACGGAGGCAGCTATAGCTTCCTACGGTGTAAACCCTC
JMFS039C03+ CAAAACGGAGGCAGCTATAGCTTCCTACGGTGTAAACCCTC
JMSF050B10+ CAAAACGGAGGCAGCTATAGCTTCCTACGGTGTAAACCCTCATCCATCCCTCGCCCTCTC
____________________________________________________________
consensus CAAAACGGAGGCAGCTATAGCTTCCTACGGTGTAAACCCTCATCCATCCCTCGCCCTCTC