Contig 013560:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF042K05Sequence699013560 (2)ref|XP_004245777.1|232PREDICTED: uncharacterized protein LOC101258981 [Solanum lycopersicum]797008628 (2)emb|CBI38141.3|4e-39unnamed protein product [Vitis vinifera]
JMSF049L08Sequence446013560 (2)728008628 (2)emb|CBI37359.3|5e-93unnamed protein product [Vitis vinifera]

Alignment

This contig is upended


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JMSF042K05+                                                                     TG
                      ____________________________________________________________
consensus                                                                       TG
 
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JMSF042K05+           AGTCATTCATAGCAGCAAGAGCTTGTAAAGTCCATAAAGGAAACTTTTTTGACGAACAAA
                      ____________________________________________________________
consensus             AGTCATTCATAGCAGCAAGAGCTTGTAAAGTCCATAAAGGAAACTTTTTTGACGAACAAA
 
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JMSF042K05+           AGGCACTGGAAATTATACTAGGGTGCTTCCTCGATTCACTTTTTGAATGCGCTGGAGAAG
                      ____________________________________________________________
consensus             AGGCACTGGAAATTATACTAGGGTGCTTCCTCGATTCACTTTTTGAATGCGCTGGAGAAG
 
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JMSF042K05+           TCACAACTGAGCTTTGTTCAGAAGATGGACGGCTAGTGCATTGCTCAAAAATGCTCCTAT
                      ____________________________________________________________
consensus             TCACAACTGAGCTTTGTTCAGAAGATGGACGGCTAGTGCATTGCTCAAAAATGCTCCTAT
 
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JMSF042K05+           ATAGAGAAAGAACATGCTGCTCACGGTTTGTGACCTCTTCTTCAAGTAACTCGATTTCAG
                      ____________________________________________________________
consensus             ATAGAGAAAGAACATGCTGCTCACGGTTTGTGACCTCTTCTTCAAGTAACTCGATTTCAG
 
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JMSF042K05+           CTATCAGCTCCTTAGTCTGGGCTGAAAAATGTCGATGGCCAGGGGACAGAGTGCTAGAAG
                      ____________________________________________________________
consensus             CTATCAGCTCCTTAGTCTGGGCTGAAAAATGTCGATGGCCAGGGGACAGAGTGCTAGAAG
 
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JMSF042K05+           TTCGTCCCATCGCCCTCTCAAGCAACATCCTCATTGATCTCTCCTGCTGCAAGCGCAATT
                      ____________________________________________________________
consensus             TTCGTCCCATCGCCCTCTCAAGCAACATCCTCATTGATCTCTCCTGCTGCAAGCGCAATT
 
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JMSF042K05+           GCAACTGTTCGATATCTCTTTCCAGGGAAGCTCGGTTGTTGGGAACAGCATCCATGTTGG
                      ____________________________________________________________
consensus             GCAACTGTTCGATATCTCTTTCCAGGGAAGCTCGGTTGTTGGGAACAGCATCCATGTTGG
 
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JMSF042K05+           TATTATCGGAGTATTCATGAAGTGGACTCGCTCTGCAGCTCCGTGTTGAAGGTGGCAATC
                      ____________________________________________________________
consensus             TATTATCGGAGTATTCATGAAGTGGACTCGCTCTGCAGCTCCGTGTTGAAGGTGGCAATC
 
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JMSF042K05+           CATGTGATCCATTGAAGTCCTTCTGTGTGTGATCTGGACCACCACCTTTCGGGAGATTCA
                      ____________________________________________________________
consensus             CATGTGATCCATTGAAGTCCTTCTGTGTGTGATCTGGACCACCACCTTTCGGGAGATTCA
 
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JMSF042K05+           AGTTTCTTTCCGAAGCACTCCTTGAACGCCTATGGCGGACATAACCATTAGAAGAAGCTC
                      ____________________________________________________________
consensus             AGTTTCTTTCCGAAGCACTCCTTGAACGCCTATGGCGGACATAACCATTAGAAGAAGCTC
 
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JMSF042K05+           TGCCCGAACCTTCATCCACAACTAAACCACTCATTTTGCTTCTCTTTCAGCCTTTACATA
JMSF049L08+                                             TTTGCTTCTCTTTCAGCCTTTACATA
                      ____________________________________________________________
consensus             TGCCCGAACCTTCATCCACAACTAAACCACTCATTTTGCTTCTCTTTCAGCCTTTACATA
 
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JMSF042K05+           CACATAATGTTCAAGCATCCCATCCAAACCCACAC                         
JMSF049L08+           CACATAATGTTCNAGCATCCCATCCAAACCCACACAACCNAGATACATGCATTGTAGCTA
                      ____________________________________________________________
consensus             CACATAATGTTCAAGCATCCCATCCAAACCCACACAACCNAGATACATGCATTGTAGCTA
 
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JMSF049L08+           ACATTTNATATATACCGCAAACACATAGTGCAGTAAGAAACATAAGAATCGGCTATTTTT
                      ____________________________________________________________
consensus             ACATTTNATATATACCGCAAACACATAGTGCAGTAAGAAACATAAGAATCGGCTATTTTT
 
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JMSF049L08+           GAAAAAAACAGACAGATTGTTTAATGACTGCANCAGTAAGAATGAATGGGGGGGTGGGGG
                      ____________________________________________________________
consensus             GAAAAAAACAGACAGATTGTTTAATGACTGCANCAGTAAGAATGAATGGGGGGGTGGGGG
 
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JMSF049L08+           GTGGGGGTGGGATAAAAAAAGAAAAAAGAAGTGATTTTTAATGAGTTTTCANCATTAAAG
                      ____________________________________________________________
consensus             GTGGGGGTGGGATAAAAAAAGAAAAAAGAAGTGATTTTTAATGAGTTTTCANCATTAAAG
 
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JMSF049L08+           TAAACTATGGTTCGAAAAGAGGCATGAGATTTCAAGAAACTGAATGCAGAGAGACTGTGG
                      ____________________________________________________________
consensus             TAAACTATGGTTCGAAAAGAGGCATGAGATTTCAAGAAACTGAATGCAGAGAGACTGTGG
 
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JMSF049L08+           GGAAGAAGAAAGATGAAAGTTTGAAATAAGATTTANCGAGCGCAAGCTTCAGACGTACGC
                      ____________________________________________________________
consensus             GGAAGAAGAAAGATGAAAGTTTGAAATAAGATTTANCGAGCGCAAGCTTCAGACGTACGC
 
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JMSF049L08+           AGAACAACACAAAACCCAAAGTGGAGCGAAAGAGATCGAGATGGTGGACCAGGATGGCTC
                      ____________________________________________________________
consensus             AGAACAACACAAAACCCAAAGTGGAGCGAAAGAGATCGAGATGGTGGACCAGGATGGCTC