Contig 013559:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF052O13+                                                                      A
                      ____________________________________________________________
consensus                                                                        A
 
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JMSF052O13+           CTCAAAGTGTGCGATACCACTGGCATAATGGCATCTGATAACTGAAATTACTGGAAATTT
                      ____________________________________________________________
consensus             CTCAAAGTGTGCGATACCACTGGCATAATGGCATCTGATAACTGAAATTACTGGAAATTT
 
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JMSF052O13+           TCACCGGGGTAGAAATATCCATGATTCCATTCAAATAATAATTTCACCCCAATTAGTAAA
JMSF049J05+                                                              ATTAGTAAA
                      ____________________________________________________________
consensus             TCACCGGGGTAGAAATATCCATGATTCCATTCAAATAATAATTTCACCCCAATTAGTAAA
 
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JMSF052O13+           CACACACTAAAATTCACAAATAAGACATGGTTAAATGCTAGAGCGTTAGACATCCCTAGA
JMSF049J05+           CACACACTAAAATTCACAAATAAGACATGGTTAAATGCTAGAGCGTTAGACATCCCTAGA
                      ____________________________________________________________
consensus             CACACACTAAAATTCACAAATAAGACATGGTTAAATGCTAGAGCGTTAGACATCCCTAGA
 
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JMSF052O13+           CCTAGAAATTAATTCACAGAGAAATGATTGAGAAGTCACAGAAGTTATAATGCTAGAGCG
JMSF049J05+           CCTAGAAATTAATTCACAGAGAAATGATTGAGAAGTCACAGAAGTTATAATGCTAGAGCG
                      ____________________________________________________________
consensus             CCTAGAAATTAATTCACAGAGAAATGATTGAGAAGTCACAGAAGTTATAATGCTAGAGCG
 
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JMSF052O13+           TTAGACATCCCTAAACCTAGACAGAATAAGAGGTTGCTAATTGAAAACCCTCATATCAAA
JMSF049J05+           TTAGACATCCCTAAACCTAGACAGAATAAGAGGTTGCTAATTGAAAACCCTCATATCAAA
                      ____________________________________________________________
consensus             TTAGACATCCCTAAACCTAGACAGAATAAGAGGTTGCTAATTGAAAACCCTCATATCAAA
 
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JMSF052O13+           ATATCCAACAATCGCATATTCACATGGACATTATACTGCAAAAACTCAAAAAGTAACTAG
JMSF049J05+           ATATCCAACAATCGCATATTCACATGGACATTATACTGCAAAAACTCAAAAAGTAACTAG
                      ____________________________________________________________
consensus             ATATCCAACAATCGCATATTCACATGGACATTATACTGCAAAAACTCAAAAAGTAACTAG
 
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JMSF052O13+           TCTATTCTGTTACAGACCTGCAAATGAGCTCTAAAAAACACAGAACAGAATTTGGGGATA
JMSF049J05+           TCTATTCTGTTACAGACCTGCAAATGAGCTCTAAAAAACACAGAACAGAATTTGGGGATA
                      ____________________________________________________________
consensus             TCTATTCTGTTACAGACCTGCAAATGAGCTCTAAAAAACACAGAACAGAATTTGGGGATA
 
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JMSF052O13+           AAGGAAAGAAGGAGTTAAAGAGGAAGAAGAATGGAGGTAAAGAAGATAGATTAGGGTTTA
JMSF049J05+           AAGGAAAGAAGGAGTTAAAGAGGAAGAAGAATGGAGGTAAAGAAGATAGATTAGGGTTTA
                      ____________________________________________________________
consensus             AAGGAAAGAAGGAGTTAAAGAGGAAGAAGAATGGAGGTAAAGAAGATAGATTAGGGTTTA
 
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JMSF052O13+           TCTCTTTCGAAAGAAATGTCCAGAAGCATAATAATCCTCCAAAAACCAAAAACCTTACAA
JMSF049J05+           TCTCTTTCGAAAGAAATGTCCAGAAGCATAATAATCCTCCAAAAACCAAAAACCTTACAA
                      ____________________________________________________________
consensus             TCTCTTTCGAAAGAAATGTCCAGAAGCATAATAATCCTCCAAAAACCAAAAACCTTACAA
 
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JMSF052O13+           TAAATATCAAAAACAAGTCAGAACAAATCAGAAATATCCTAACCAACTCCCCTTTTCACG
JMSF049J05+           TAAATATCAAAAACAAGTCAGAACAAATCAGAAATATCCTAACCAACTCCCCTTTTCACG
                      ____________________________________________________________
consensus             TAAATATCAAAAACAAGTCAGAACAAATCAGAAATATCCTAACCAACTCCCCTTTTCACG
 
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JMSF052O13+           CTGAGCATTTTGTACTGTGTTTGTATCCAAACGGCGTCGTTGAGGAGGTTTTCAACTTCT
JMSF049J05+           CTGAGCATTTTGTACTGTGTTTGTATCCAAACGGCGTCGTTGAGGAGGTTTTCAACTTCT
                      ____________________________________________________________
consensus             CTGAGCATTTTGTACTGTGTTTGTATCCAAACGGCGTCGTTGAGGAGGTTTTCAACTTCT
 
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JMSF052O13+           TCCAACGGCTAGCTTCAAACGACGACGTTTAGCTCT                        
JMSF049J05+           TCCAACGGCTAGCTTCAAACGACGACGTTTAGCTCTTCTCCGCAACGGCTCCAACGACTC
                      ____________________________________________________________
consensus             TCCAACGGCTAGCTTCAAACGACGACGTTTAGCTCTTCTCCGCAACGGCTCCAACGACTC
 
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JMSF049J05+           CCCTTCATACGCCGTCGTTTAGATAAGTGACTTGTTTATTCGAATTAACCCAAAACGACC
                      ____________________________________________________________
consensus             CCCTTCATACGCCGTCGTTTAGATAAGTGACTTGTTTATTCGAATTAACCCAAAACGACC