clone | 5'-sequence | 3'-sequence | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
JMFF005K04 | Sequence | 271 | 013558 (4) | 720 | 014119 (4) | gb|KDO70388.1| | 2e-94 | hypothetical protein CISIN_1g024548mg [Citrus sinensis] | |||
JMFF007P16 | Sequence | 520 | 013558 (4) | ref|XP_011094340.1| | 4e-15 | PREDICTED: cell division protein FtsZ homolog 2-2, chloroplastic [Sesamum indic | 760 | 014119 (4) | gb|KDO70388.1| | 4e-100 | hypothetical protein CISIN_1g024548mg [Citrus sinensis] |
JMSF027J14 | Sequence | 600 | 013558 (4) | ref|XP_011094340.1| | 3e-24 | PREDICTED: cell division protein FtsZ homolog 2-2, chloroplastic [Sesamum indic | 709 | 015058 | ref|XP_009605336.1| | 2e-22 | PREDICTED: protein TRANSPARENT TESTA 12-like [Nicotiana tomentosiformis] |
JMSF049G22 | Sequence | 627 | 013558 (4) | ref|XP_011094340.1| | 3e-25 | PREDICTED: cell division protein FtsZ homolog 2-2, chloroplastic [Sesamum indic | 832 | 014119 (4) | gb|KDO70388.1| | 4e-61 | hypothetical protein CISIN_1g024548mg [Citrus sinensis] |
This contig is upended
. : . : . : . : . : . :
JMSF027J14+ TCTCTGTGACATTTTCAATGCCACT
JMSF049G22+ GCTCTCTGTGACATTTTCAATGCCACT
____________________________________________________________
consensus GCTCTCTGTGACATTTTCAATGCCACT
. : . : . : . : . : . :
JMSF027J14+ TTCCTGTCTTGGGGTCATCATTGTACTGTTCCCCTCACCTCTAAGCATTGAAATCTCTGG
JMFF007P16+ AATCTCTGG
JMSF049G22+ TTCCTGTCTNGGGGTCATCATTGTACTGTTCCCCTCACCTCTAAGCATTGAAATCTCTGG
____________________________________________________________
consensus TTCCTGTCTTGGGGTCATCATTGTACTGTTCCCCTCACCTCTAAGCATTGAAATCTCTGG
. : . : . : . : . : . :
JMSF027J14+ ATGCAGGTTCAGAAACGGATCTTTACTCTGATACTGATTTGCACTATGGGCATTGGCTGA
JMFF007P16+ ATGCAGGTTCAGAAACGGATCTTTACTCTGATACTGATTTGCACTATGGGCATTGGCTGA
JMSF049G22+ ATGCAGGTTCAGAAACGGATCTTTACTCTGATACTGATTTGCACTATGGGCATTGGCTGA
____________________________________________________________
consensus ATGCAGGTTCAGAAACGGATCTTTACTCTGATACTGATTTGCACTATGGGCATTGGCTGA
. : . : . : . : . : . :
JMSF027J14+ ATTATTGGAATTGGCAGAACACTTAAGCAGAGACCAATTCAAACCACCCCTTCTATTGAC
JMFF007P16+ ATTATTGGAATTGGCAGAACACTTAAGCAGAGACCAATTCAAACCACCCCTTCTATTGAC
JMSF049G22+ ATTATTGGAATTGGCAGAACACTTAAGCAGAGACCAATTCAAACCACCCCTTCTATTGAC
____________________________________________________________
consensus ATTATTGGAATTGGCAGAACACTTAAGCAGAGACCAATTCAAACCACCCCTTCTATTGAC
. : . : . : . : . : . :
JMSF027J14+ ACTCAAACTCAAAGATCCGTTCTTTTCATTGAGCATTTTCACAGGGCTAACTCTCCCCCC
JMFF007P16+ ACTCAAACTCAAAGATCCGTTCTTTTCATTGAGCATTTTCACAGGGCTAACTCTCCCCCC
JMSF049G22+ ACTCAAACTCAAAGATCCGTTCTTTTCATTGAGCATTTTCACAGGGCTAACTCTCCCCCC
____________________________________________________________
consensus ACTCAAACTCAAAGATCCGTTCTTTTCATTGAGCATTTTCACAGGGCTAACTCTCCCCCC
. : . : . : . : . : . :
JMSF027J14+ AATAACAGTCAGTACCCCCCTCGGGCACCAAGTATCCGAAGTCATAAAGTAAGTTGGAGT
JMFF007P16+ AATAACAGTCAGTACCCCCCTCGGGCACCAAGTATCCGAAGTCATAAAGTAAGTTGGAGT
JMSF049G22+ AATAACAGTCAGTACCCCCCTCGGGCACCAAGTATCCGAAGTCATAAAGTAAGTTGGAGT
____________________________________________________________
consensus AATAACAGTCAGTACCCCCCTCGGGCACCAAGTATCCGAAGTCATAAAGTAAGTTGGAGT
. : . : . : . : . : . :
JMSF027J14+ ACAAATAGTCATACCAGATTACCAGACAAAATACCCAATTCCAAAATTTAGATTTTATAT
JMFF007P16+ ACAAATAGCCATACCAGATTACCAGACAAAATACCCAATTCCAAAATTTAGATTTTATAT
JMFF005K04+ CATACCAGATTACCAGACAAAATACCCAATTCCAAAATTTAGATTTTATAT
JMSF049G22+ ACAAATAGCCATACCAGATTACCAGACAAAATACCCAATTCCAAAATTTAGATTTTATAT
____________________________________________________________
consensus ACAAATAGCCATACCAGATTACCAGACAAAATACCCAATTCCAAAATTTAGATTTTATAT
. : . : . : . : . : . :
JMSF027J14+ AATAATGTTCAAGAAAATACGCATTCACCCTTAATTCTGTTCTCCAAGATTGTCCTGGAT
JMFF007P16+ AATAATGTTCAAGAAAATACGCATTCACCCTTAATTCTGTTCTCCAAGATTGTCCTGGAT
JMFF005K04+ AATAATGTTCAAGAAAATACGCATTCACCCTTAATTCTGTTCTCCAAGATTGTCCTGGAT
JMSF049G22+ AATAATGTTCAAGAAAATACGCATTCACCCTTAATTCTGTTCTCCAAGATTGTCCTGGAT
____________________________________________________________
consensus AATAATGTTCAAGAAAATACGCATTCACCCTTAATTCTGTTCTCCAAGATTGTCCTGGAT
. : . : . : . : . : . :
JMSF027J14+ TGTTGAAGAGAGAGAGAGAGAGAGGCTAAGAATTCGTGGGCTTGGGAACAGCAAGAGCGA
JMFF007P16+ TGTTGAAGAGAGAGAGAGAGAGAGGCTAAGAATTCGTGGGCTTGGGAACAGCAAGAGCGA
JMFF005K04+ TGTTGAAGAGAGAGAGAGAGAGAGGCTAAGAATTCGTGGGCTTGGGAACAGCAAGAGCGA
JMSF049G22+ TGTTGAAGAGAGAGAGAGAGAGAGGCTAAGAATTCGTGGGCTTGGGAACAGCAAGAGCGA
____________________________________________________________
consensus TGTTGAAGAGAGAGAGAGAGAGAGGCTAAGAATTCGTGGGCTTGGGAACAGCAAGAGCGA
. : . : . : . : . : . :
JMSF027J14+ TCCTTGTGAGCATAAACGGAAGGGTAAGCTGCATAGGCCAGTCAAGGTGTAGATTGTAGA
JMFF007P16+ TCCTTGTGAGCATAAACGGAAGGGTAAGCTGCATAGGCCAGTCAAGGTGTAGATTGTAGA
JMFF005K04+ TCCTTGTGAGCATAAACGGAAGGGTAAGCTGCATAGGCCAGTCAAGGTGTAGATTGTAGA
JMSF049G22+ TCCTTGTGAGCATAAACGGAAGGGTAAGCTGCATAGGCCAGTCAAGGTGTAGATTGTAGA
____________________________________________________________
consensus TCCTTGTGAGCATAAACGGAAGGGTAAGCTGCATAGGCCAGTCAAGGTGTAGATTGTAGA
. : . : . : . : . : . :
JMSF027J14+ GAGTAGAGCAAGGGATCCTATTCCTCCAAAT
JMFF007P16+ GAGTAGAGCAAGGGATCCTATTCCTCCAAAT
JMFF005K04+ GAGTAGAGCAAGGGATCCTATTCCTCCAAAT
JMSF049G22+ GAGTAGAGCAAGGGATCCTATTCCTCCAAATGTTATCATTTTTCATTTCACCCAACAATC
____________________________________________________________
consensus GAGTAGAGCAAGGGATCCTATTCCTCCAAATGTTATCATTTTTCATTTCACCCAACAATC