Contig 013557:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF049G02+                                                     GAGGTTCAACCAACAGA
JMSF049G02-                                                      GAGGTTCAACCAACAGA
                      ____________________________________________________________
consensus                                                        GAGGTTCAACCAACAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF049G02+          CCGGATCCGATTTAAACACTCCCGGAGCCTTGCACGAAGAAGGAAGCTCAAACCTCGGAA
JMSF049G02-           CCGGATCCGATTTAAACACTCCCGGAGCCTTGCACGAAGAAGGAAGCTCAAACCTCGGAA
                      ____________________________________________________________
consensus             CCGGATCCGATTTAAACACTCCCGGAGCCTTGCACGAAGAAGGAAGCTCAAACCTCGGAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF049G02+          AATAGAGTATGCAACAAGGCTCGTAAAGCTCTGGATTTTTTTTCTGCGAGTGGGATAAAT
JMSF049G02-           AATAGAGTATGCAACAAGGCTCGTAAAGCTCTGGATTTTTTTTCTGCGAGTGGGATAAAT
                      ____________________________________________________________
consensus             AATAGAGTATGCAACAAGGCTCGTAAAGCTCTGGATTTTTTTTCTGCGAGTGGGATAAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF049G02+          CCATGACTACGGAATCTCGTAAAGTGATTGTTCATTTGAGAGCTACTGGTGATGCTCCTA
JMSF049G02-           CCATGACTACGGAATCTCGTAAAGTGATTGTTCATTTGAGAGCTACTGGTGATGCTCCTA
                      ____________________________________________________________
consensus             CCATGACTACGGAATCTCGTAAAGTGATTGTTCATTTGAGAGCTACTGGTGATGCTCCTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF049G02+          TCCTCAAACAGTCTAAATTCAAGATTGGTGGGAATGACAAGTTCGCTAAAGTAATTGATT
JMSF049G02-           TCCTCAAACAGTCTAAATTCAAGATTGGTGGGAATGACAAGTTCGCTAAAGTAATTGATT
                      ____________________________________________________________
consensus             TCCTCAAACAGTCTAAATTCAAGATTGGTGGGAATGACAAGTTCGCTAAAGTAATTGATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF049G02+          TTCTGTGCCGGCAACTGCACAGGGAGACGCTGTTTGTGTATGTCAACAGTGCCTTCTCAC
JMSF049G02-           TTCTGTGCCGGCAACTGCACAGGGAGACGCTGTTTGTGTATGTCAACAGTGCCTTCTCAC
                      ____________________________________________________________
consensus             TTCTGTGCCGGCAACTGCACAGGGAGACGCTGTTTGTGTATGTCAACAGTGCCTTCTCAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF049G02+          CAAATCCAGATGAGTTGATAAATGACCTATATAATAACTTTGGTTTTGATGGGAAGCTGG
JMSF049G02-           CAAATCCAGATGAGTTGATAAATGACCTATATAATAACTTTGGTTTTGATGGGAAGCTGG
                      ____________________________________________________________
consensus             CAAATCCAGATGAGTTGATAAATGACCTATATAATAACTTTGGTTTTGATGGGAAGCTGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF049G02+          TGGTGAACTATGCATGCTCCATGGCATGGGGCTAAGTATGAGCAGTGGTTTGGCGCTCTG
JMSF049G02-           TGGTGAACTATGCATGCTCCATGGCATGGGGCTAAGTATGAGCAGTGGTTTGGCGCTCTG
                      ____________________________________________________________
consensus             TGGTGAACTATGCATGCTCCATGGCATGGGGCTAAGTATGAGCAGTGGTTTGGCGCTCTG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF049G02+          GGTCTGATATACAAGTAGATTAACGCCTGCCTTTGTACAGTCCCTCAATCCCATTTTATT
JMSF049G02-           GGTCTGATATACAAGTAGATTAACGCCTGCCTTTGTACAGTCCCTCAATCCCATTTTATT
                      ____________________________________________________________
consensus             GGTCTGATATACAAGTAGATTAACGCCTGCCTTTGTACAGTCCCTCAATCCCATTTTATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF049G02+          TGTGAATGTGTATGACAAGTATATCGGTTCTCATTCAAACTGTCTGCTTAGTTAAGTCAA
JMSF049G02-           TGTGAATGTGTATGACAAGTATATCGGTTCTCATTCAAACTGTCTGCTTAGTTAAGTCAA
                      ____________________________________________________________
consensus             TGTGAATGTGTATGACAAGTATATCGGTTCTCATTCAAACTGTCTGCTTAGTTAAGTCAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF049G02+          TTCCTCTCATCTT                                               
JMSF049G02-           TTCCTCTCATCTTACATTGCATAACTGCACATACTAATGGAATGATGAAAGCTGTTGATC
                      ____________________________________________________________
consensus             TTCCTCTCATCTTACATTGCATAACTGCACATACTAATGGAATGATGAAAGCTGTTGATC