Contig 013555:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF049E07+                                       GGAACAGAACAGAACAGAACGAAGCTATCGA
JMSF049E07-                                        GGAACAGAACAGAACAGAACGAAGCTATCGA
                      ____________________________________________________________
consensus                                          GGAACAGAACAGAACAGAACGAAGCTATCGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF049E07+          TCGCCTTAAGGACGCCAGGTTGATGGAATTCTCAGATGTATCCTCTGAGTTGTTGTTCAG
JMSF049E07-           TCGCCTTAAGGACGCCAGGTTGATGGAATTCTCAGATGTATCCTCTGAGTTGTTGTTCAG
                      ____________________________________________________________
consensus             TCGCCTTAAGGACGCCAGGTTGATGGAATTCTCAGATGTATCCTCTGAGTTGTTGTTCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF049E07+          TAATCTGGGCGAGAACTTGGTAGTTGAAATCCTGGCCAGGCTCCCCTGCAGAACAGCAAT
JMSF049E07-           TAATCTGGGCGAGAACTTGGTAGTTGAAATCCTGGCCAGGCTCCCCTGCAGAACAGCAAT
                      ____________________________________________________________
consensus             TAATCTGGGCGAGAACTTGGTAGTTGAAATCCTGGCCAGGCTCCCCTGCAGAACAGCAAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF049E07+          CCGGTTGAAATTGCAGCGTGATGCTTCACCACCGACTTGCTTCGCGCCGAGTCCGCCTCA
JMSF049E07-           CCGGTTGAAATTGCAGCGTGATGCTTCACCACCGACTTGCTTCGCGCCGAGTCCGCCTCA
                      ____________________________________________________________
consensus             CCGGTTGAAATTGCAGCGTGATGCTTCACCACCGACTTGCTTCGCGCCGAGTCCGCCTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF049E07+          AATTCCACAGTTCCTCTCCGTTGCCGACCCTCTCTGTGTGCGTTTCTCCATGGTTGGCTC
JMSF049E07-           AATTCCACAGTTCCTCTCCGTTGCCGACCCTCTCTGTGTGCGTTTCTCCATGGTTGGCTC
                      ____________________________________________________________
consensus             AATTCCACAGTTCCTCTCCGTTGCCGACCCTCTCTGTGTGCGTTTCTCCATGGTTGGCTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF049E07+          TTCCATCAGGCAGTCAAAGTATCGAAAGAGGAATGCACTTTTTTTCCTTTCTGTTGGACA
JMSF049E07-           TTCCATCAGGCAGTCAAAGTATCGAAAGAGGAATGCACTTTTTTTCCTTTCTGTTGGACA
                      ____________________________________________________________
consensus             TTCCATCAGGCAGTCAAAGTATCGAAAGAGGAATGCACTTTTTTTCCTTTCTGTTGGACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF049E07+          AGTTACCTTCTGATGTTTAAGTGGTCTCATCCTTGTATGGTTAGTAAATTGGTCATATTT
JMSF049E07-           AGTTACCTTCTGATGTTTAAGTGGTCTCATCCTTGTATGGTTAGTAAATTGGTCATATTT
                      ____________________________________________________________
consensus             AGTTACCTTCTGATGTTTAAGTGGTCTCATCCTTGTATGGTTAGTAAATTGGTCATATTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF049E07+          GGTGCTGGAAGGTTTATTATAATTGCACTGTCACTTCCATCATATGCAGTTTAAGATATG
JMSF049E07-           GGTGCTGGAAGGTTTATTATAATTGCACTGTCACTTCCATCATATGCAGTTTAAGATATG
                      ____________________________________________________________
consensus             GGTGCTGGAAGGTTTATTATAATTGCACTGTCACTTCCATCATATGCAGTTTAAGATATG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF049E07+          CATAATATGAT                                                 
JMSF049E07-           CATAATATGATTCCAGTAATGTATGAATAATTTTGTCATTCCAAAAAAAGAAAAAAAAAA
                      ____________________________________________________________
consensus             CATAATATGATTCCAGTAATGTATGAATAATTTTGTCATTCCAAAAAAAGAAAAAAAAAA