Contig 013553:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF035L07Sequence595013553 (2)gb|AGX27504.1|7e-18NBS-LRR class resistance protein Fy8-Ry8 [Sesamum indicum]645012683 (2)ref|XP_009603186.1|2e-17PREDICTED: putative late blight resistance protein homolog R1A-3 isoform X2 [Ni
JMSF049B06Sequence693013553 (2)ref|XP_011072647.1|6e-25PREDICTED: putative late blight resistance protein homolog R1B-16 [Sesamum indi731018347ref|XP_009794525.1|2e-10PREDICTED: putative late blight resistance protein homolog R1A-10 isoform X1 [N

Alignment

This contig is upended


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JMSF049B06+                                   GCAATGTAAAAGGTGTATGAGCATCTCTTTAAGCTG
                      ____________________________________________________________
consensus                                     GCAATGTAAAAGGTGTATGAGCATCTCTTTAAGCTG
 
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JMFF035L07+                                                   TGAGACATAATAAGTGGATC
JMSF049B06+           GTATTCTTGAGACACAACTGCCCATGCTCGAGCATCGAATTGAGACATAATAAGTGGATC
                      ____________________________________________________________
consensus             GTATTCTTGAGACACAACTGCCCATGCTCGAGCATCGAATTGAGACATAATAAGTGGATC
 
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JMFF035L07+           GTTGTAGACTTTTTTAGCTAGTGTTGTCTTTCCAATGCCACCCATGCCTGTAATTGGGAT
JMSF049B06+           TTCGTAGACTTTTTTAGCTAGTGTTGTCTTTCCGATGCCACCCATGCCTGTAATTGGGAT
                      ____________________________________________________________
consensus             TTTGTAGACTTTTTTAGCTAGTGTTGTCTTTCCGATGCCACCCATGCCTGTAATTGGGAT
 
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JMFF035L07+           GACTATCCGATCTTTATTATAAGACCGGTGACCAACGACCATGCTCATTATTTTCCCAAA
JMSF049B06+           GACTATCCGATCT---TTATAAAACTGGTGATCTACGACCATGCTCATTATTTTCCCAAA
                      ____________________________________________________________
consensus             GACTATCCGATCTTTATTATAAGACTGGTGATCTACGACCATGCTCATTATTTTCCCAAA
 
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JMFF035L07+           TTCATCCTCGCATCCTATCATTTTATTCCCAGGGTTGTTTTCCTTTTCATTTTGGATCCT
JMSF049B06+           TTCATCCTCGCATCCTATCATTTTATTCCCAGGGTTGTTTTCCTTTTCATTTTGGATCCT
                      ____________________________________________________________
consensus             TTCATCCTCGCATCCTATCATTTTATTCCCAGGGTTGTTTTCCTTTTCATTTTGGATCCT
 
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JMFF035L07+           GACTTCAAGTGAGTCGATATCTTTTAACACTTTTCTCAAGATCTGGTGGAGCCCATCAGA
JMSF049B06+           GATTTCAAGTGACTCGATATCTTTTAACACTTTCCTCAAGATCTGGTGAAGCCCATCAGA
                      ____________________________________________________________
consensus             GATTTCAAGTGAGTCGATATCTTTTAACACTTTTCTCAAGATCTGGTGGAGCCCATCAGA
 
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JMFF035L07+           AGCCTCAGCTACAGAATCTTCATTGGCCAAGTAAACCGCTCCGAGTTGTGACTCAATTTC
JMSF049B06+           AGCCTCGGCTACAGAATCTTTATTGGCCAAGTAAATCGCTCCGAGTTGTGACTCAATTTC
                      ____________________________________________________________
consensus             AGCCTCGGCTACAGAATCTTTATTGGCCAAGTAAATCGCTCCGAGTTGTGACTCAATTTC
 
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JMFF035L07+           AGCCTCTGCTTCAACAGCTATGTCTCTGATTTTTGCCTCTAGTTCTTGATTTATGGTTTT
JMSF049B06+           AGCCTCTGCTTCAACAGCTACGTCTCTGATTTTTGCCTCTAGTTCTTGATTTATGGTTTT
                      ____________________________________________________________
consensus             AGCCTCTGCTTCAACAGCTATGTCTCTGATTTTTGCCTCTAGTTCTTGATTTATGGTTTT
 
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JMFF035L07+           TTTGGCTGATAGAATGGCTTGGACAAAGCCCAGCTTCTCAGACAAGGATTTCGCTATCTG
JMSF049B06+           TTTCGCTGATAGAATGGCTTGGACAAAGCCCAGCTTCTCAGACAAGGATTTCGCTATCTG
                      ____________________________________________________________
consensus             TTTGGCTGATAGAATGGCTTGGACAAAGCCCAGCTTCTCAGACAAGGATTTCGCTATCTG
 
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JMFF035L07+           TGTATCATCAAGAATTGGTGGATGGCGTTTCAGAAGTTGGTGATCTACTATTCCCAGTAA
JMSF049B06+           TGTATCATCAAAAATTGGTGGATGGCGTTTCAGAAGTTGATGATCTACTATTCCCAGTAA
                      ____________________________________________________________
consensus             TGTATCATCAAGAATTGGTGGATGGCGTTTCAGAAGTTGGTGATCTACTATTCCCAGTAA
 
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JMFF035L07+           AGAAGTTACAACAACATACGCCATTCAGTGTA                            
JMSF049B06+           AGAAGTTACAACAACATAAGCCATTCAGTGTATGTACTAATTCTATCGCGCTAGCTTTAG
                      ____________________________________________________________
consensus             AGAAGTTACAACAACATACGCCATTCAGTGTATGTACTAATTCTATCGCGCTAGCTTTAG
 
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JMSF049B06+           TGCAGAGAGATAGATGGTATGAAGTCTGGGGTTTCAAATCAAAGTTTGGTCTAAAATCTC
                      ____________________________________________________________
consensus             TGCAGAGAGATAGATGGTATGAAGTCTGGGGTTTCAAATCAAAGTTTGGTCTAAAATCTC