Contig 013552:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF005A11Sequence243013552 (4)389019220ref|XP_011076259.1|4e-12PREDICTED: uncharacterized protein LOC105160533 isoform X1 [Sesamum indicum]
JMSF005O13Sequence261024084ref|XP_009607662.1|3e-18PREDICTED: protein NRT1/ PTR FAMILY 1.2-like [Nicotiana tomentosiformis]111013552 (4)ref|XP_011075958.1|54.7PREDICTED: uncharacterized protein LOC105160326 [Sesamum indicum]
JMSF049A06Sequence676013552 (4)ref|XP_009626332.1|4e-61PREDICTED: uncharacterized protein LOC104117056 isoform X1 [Nicotiana tomentosi636013552 (4)ref|XP_009626332.1|2e-61PREDICTED: uncharacterized protein LOC104117056 isoform X1 [Nicotiana tomentosi

Alignment

This contig is upended


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JMSF005A11-                                                       GAACTTTGAGAGGATA
rJMSF049A06+                                                      GAACTTTGAGAGGATA
JMSF049A06-                                                       GAACTTTGAGAGGATA
                      ____________________________________________________________
consensus                                                         GAACTTTGAGAGGATA
 
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JMSF005A11-           AAGCCGGAGCCGGAAAAGAGCGATCGGCGAACGCAACAATGGCCGTATTAACGACTCCGA
rJMSF049A06+          AAGCCGGAGCCGGAAAAGAGCGATCGGCGAACGCAACAATGGCCGTATTAACGACTCCGA
JMSF049A06-           AAGCCGGAGCCGGAAAAGAGCGATCGGCGAACGCAACAATGGCCGTATTAACGACTCCGA
                      ____________________________________________________________
consensus             AAGCCGGAGCCGGAAAAGAGCGATCGGCGAACGCAACAATGGCCGTATTAACGACTCCGA
 
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JMSF005A11-           TCACCAGAGGCTTCTCAACGCTACAAACATTCCCCAAAATTGGTGTTAAGCTCGAAAATC
rJMSF049A06+          TCACCAGAGGCTTCTCAACGCTACAAACATTCCCCAAAATTGGTGTTAAGCTCGAAAATC
JMSF049A06-           TCACCAGAGGCTTCTCAACGCTACAAACATTCCCCAAAATTGGTGTTAAGCTCGAAAATC
                      ____________________________________________________________
consensus             TCACCAGAGGCTTCTCAACGCTACAAACATTCCCCAAAATTGGTGTTAAGCTCGAAAATC
 
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JMSF005A11-           CAGGACGTGTCAATAACTTTGTGGTTCTGTCGCAGAAAAAGAAGAGTTCCAACTCGCAAA
rJMSF049A06+          CAGGACGTGTCAATAACTTTGTGGTTCTGTCGCAGAAAAAGAAGAGTTCCAACTCGCAAA
JMSF049A06-           CAGGACGTGTCAATAACTTTGTGGTTCTGTCGCAGAAAAAGAAGAGTTCCAACTCGCAAA
                      ____________________________________________________________
consensus             CAGGACGTGTCAATAACTTTGTGGTTCTGTCGCAGAAAAAGAAGAGTTCCAACTCGCAAA
 
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JMSF005A11-           ATGAAGGCCGAGGCCGTAGAGTATGGAGGCGAAGGAAATTGACGAGG             
rJMSF049A06+          ATGAAGGCCGAGGCCGTAGAGTATGGAGGCGAAGGAAATTGACGAGGGTGGATGATAAGA
JMSF049A06-           ATGAAGGCCGAGGCCGTAGAGTATGGAGGCGAAGGAAATTGACGAGGGTGGATGATAAGA
                      ____________________________________________________________
consensus             ATGAAGGCCGAGGCCGTAGAGTATGGAGGCGAAGGAAATTGACGAGGGTGGATGATAAGA
 
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rJMSF049A06+          TGGACTACAGATTGGAAAGAATTCCTTTCTTGGAGGAGCACGTGAGGAAGATAAGGAGAG
JMSF049A06-           TGGACTACAGATTGGAAAGAATTCCTTTCTTGGAGGAGCACGTGAGGAAGATAAGGAGAG
                      ____________________________________________________________
consensus             TGGACTACAGATTGGAAAGAATTCCTTTCTTGGAGGAGCACGTGAGGAAGATAAGGAGAG
 
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rJMSF049A06+          AGGGGAAGTTGTTGACAATGGACATTGAGAGGCTATTGCTATCGGAAGAGAACCGGTTTG
JMSF049A06-           AGGGGAAGTTGTTGACAATGGACATTGAGAGGCTATTGCTATCGGAAGAGAACCGGTTTG
                      ____________________________________________________________
consensus             AGGGGAAGTTGTTGACAATGGACATTGAGAGGCTATTGCTATCGGAAGAGAACCGGTTTG
 
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rJMSF049A06+          ATTTTGTCAATGAGATCGCTGCAGAGGCAAAGGAATATGTTGAGAACAACCGCGATGAGT
JMSF049A06-           ATTTTGTCAATGAGATCGCTGCAGAGGCAAAGGAATATGTTGAGAACAACCGCGATGAGT
                      ____________________________________________________________
consensus             ATTTTGTCAATGAGATCGCTGCAGAGGCAAAGGAATATGTTGAGAACAACCGCGATGAGT
 
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rJMSF049A06+          ATGGTTCAAAGAAAGCCATGCTTCATGTCCTTAGTAATCGTATGAATGATGCTGGGTTTT
rJMSF005O13+                                                    TGAACGATGCTGGGTTTT
JMSF049A06-           ATGGTTCAAAGAAAGCCATGCTTCATGTCCTTAGTAATCGTATGAATGATGCTGGGTTTT
                      ____________________________________________________________
consensus             ATGGTTCAAAGAAAGCCATGCTTCATGTCCTTAGTAATCGTATGAATGATGCTGGGTTTT
 
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rJMSF049A06+          ATCGACCAGAGGCATACATTGAGTCAGACCCCTTCAAACCTGGTCCAGGTTATATGAGGG
rJMSF005O13+          ATCGNCCAGNGGCATACATTGAGTCAGACCCCTTCAAACCTGGTCCAGGTTATATGAGGG
JMSF049A06-           ATCGACCAGAGGCATACATTGAGTCAGACCCCTTCAAACCTGGTCCAGGTTATATGAGGG
                      ____________________________________________________________
consensus             ATCGACCAGAGGCATACATTGAGTCAGACCCCTTCAAACCTGGTCCAGGTTATATGAGGG
 
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rJMSF049A06+          AAGAACTTTAGATCATGCAACCTAAAAGTTTCTTTCTTTTAGCACTTCTCCATTGCCTTA
rJMSF005O13+          AAGAACTTTAGATCATGCAACCTAAAAGTTTCT                           
JMSF049A06-           AAGAACTTTAGATCATGCAACCTAAAAGTTTCTTTCTTTTAGCACTTCTCCATTGCCTTA
                      ____________________________________________________________
consensus             AAGAACTTTAGATCATGCAACCTAAAAGTTTCTTTCTTTTAGCACTTCTCCATTGCCTTA
 
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rJMSF049A06+          ACATTGTTCTAGTTTCATTT                                        
JMSF049A06-           ACATTGTTCTAGTTTCATTTTTGGAGTATAATCTAAAGAAAATGATATTAATACTGCAAA
                      ____________________________________________________________
consensus             ACATTGTTCTAGTTTCATTTTTGGAGTATAATCTAAAGAAAATGATATTAATACTGCAAA