Contig 013551:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF048O04Sequence634013551 (2)665013551 (2)ref|XP_006421013.1|9e-11hypothetical protein CICLE_v10006377mg [Citrus clementina] gb|ESR34253.1| hypoth

Alignment

This contig is upended


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rJMSF048O04-                               GTGTTTCCCATCACTTCTATCTTTCTCCCTTTTCTCTTT
                      ____________________________________________________________
consensus                                  GTGTTTCCCATCACTTCTATCTTTCTCCCTTTTCTCTTT
 
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rJMSF048O04-          ACCTTCTCCCTTCTCTTTGTCTTTCTTCTCCTTTTTATGTTTTTTTTCTTTGCGCTTTTC
                      ____________________________________________________________
consensus             ACCTTCTCCCTTCTCTTTGTCTTTCTTCTCCTTTTTATGTTTTTTTTCTTTGCGCTTTTC
 
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rJMSF048O04-          CTCTTTTAGCAAGTCTGCATCTTCTGATCTAGCCTTGTTTTCATATCCCGGTGGTGGAAA
                      ____________________________________________________________
consensus             CTCTTTTAGCAAGTCTGCATCTTCTGATCTAGCCTTGTTTTCATATCCCGGTGGTGGAAA
 
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rJMSF048O04-          TGGAAAGCAGCGAGACATTGCACACAATTATACAACAGGCAAAACGAGTGCTGTTGGAAA
                      ____________________________________________________________
consensus             TGGAAAGCAGCGAGACATTGCACACAATTATACAACAGGCAAAACGAGTGCTGTTGGAAA
 
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rJMSF048O04-          ACCAGTATCCTCCAATCACTTTCTCAAAACAATGTTCCAGTAAGGGAACAAACGAGCCAC
                      ____________________________________________________________
consensus             ACCAGTATCCTCCAATCACTTTCTCAAAACAATGTTCCAGTAAGGGAACAAACGAGCCAC
 
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rJMSF048O04-          TATATTCTTGTCCATGCACCATGACCCCACATTCCTTTCCAGCTTAGTAGGCCTCCATTT
                      ____________________________________________________________
consensus             TATATTCTTGTCCATGCACCATGACCCCACATTCCTTTCCAGCTTAGTAGGCCTCCATTT
 
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rJMSF048O04-          CAGCTCCCCATTGAATCACTCATCCAAAGCCTTCTACTCCAGATGCACCAGAAGTTCCAA
                      ____________________________________________________________
consensus             CAGCTCCCCATTGAATCACTCATCCAAAGCCTTCTACTCCAGATGCACCAGAAGTTCCAA
 
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rJMSF048O04-          CAGTATTATTCAAAACTCAATGGAAAAACAAAACCAATGGTAATCACCAATAGCACTAGA
                      ____________________________________________________________
consensus             CAGTATTATTCAAAACTCAATGGAAAAACAAAACCAATGGTAATCACCAATAGCACTAGA
 
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rJMSF048O04-          TAAAGCACTATAATCGCTGCTATATAGCAAAAGCTCCCACTAAATCTGAGTCAATCTAAA
                      ____________________________________________________________
consensus             TAAAGCACTATAATCGCTGCTATATAGCAAAAGCTCCCACTAAATCTGAGTCAATCTAAA
 
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rJMSF048O04-          AGGTTTCTTAAGAAGAAAATATCCCAATCTGATTTTGATGTTTTAACACTTCAAAGTGTT
JMSF048O04+                                     ATCTGATTTTGATGTTTTAACACTTCAAAGTGTT
                      ____________________________________________________________
consensus             AGGTTTCTTAAGAAGAAAATATCCCAATCTGATTTTGATGTTTTAACACTTCAAAGTGTT
 
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rJMSF048O04-          CTCAATTTTTGTTTTTTTACTTTCTCTTCACTCCCACTACACAGTTCTACTTGTATCTAC
JMSF048O04+           CTCAATTTTTGTTTTTTTACTTTCTCTTCACTCCCACTACACAGTTCTACTTGTATCTAC
                      ____________________________________________________________
consensus             CTCAATTTTTGTTTTTTTACTTTCTCTTCACTCCCACTACACAGTTCTACTTGTATCTAC
 
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rJMSF048O04-          AGTCCTCTTCNATGCCCTTTCAGAAC                                  
JMSF048O04+           AGTCCTCTTCCATGCCCTTTCAGAACAAGCAAAATAGAATACCAGTATTATTCATTTATT
                      ____________________________________________________________
consensus             AGTCCTCTTCCATGCCCTTTCAGAACAAGCAAAATAGAATACCAGTATTATTCATTTATT
 
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JMSF048O04+           AGCATTCAGAAGAGCCAAATTCACCACCAATTTTCAGCTTGAAGCCCGGGAAGATCACAG
                      ____________________________________________________________
consensus             AGCATTCAGAAGAGCCAAATTCACCACCAATTTTCAGCTTGAAGCCCGGGAAGATCACAG
 
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JMSF048O04+           AACACTCCCATTAATGGGGCGATCCATCAATGAAACCGTGACCAGTAAATAACCACTAAG
                      ____________________________________________________________
consensus             AACACTCCCATTAATGGGGCGATCCATCAATGAAACCGTGACCAGTAAATAACCACTAAG
 
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JMSF048O04+           CACCACCCAATAATCCGAATTCAACGGCCAAGTTCGGAATTGCTGATCAAAACCCTAACT
                      ____________________________________________________________
consensus             CACCACCCAATAATCCGAATTCAACGGCCAAGTTCGGAATTGCTGATCAAAACCCTAACT
 
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JMSF048O04+           CAGTCGGAAATTCTGATCCGATTCAAGAACCCTTGTCCGCTACAAAGTGAAGAACATTGT
                      ____________________________________________________________
consensus             CAGTCGGAAATTCTGATCCGATTCAAGAACCCTTGTCCGCTACAAAGTGAAGAACATTGT
 
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JMSF048O04+           AGGAAAGGACAAGATCTCAGTTAGAGCATTCAAAGTAAATACAATAAATATACATATAAT
                      ____________________________________________________________
consensus             AGGAAAGGACAAGATCTCAGTTAGAGCATTCAAAGTAAATACAATAAATATACATATAAT
 
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JMSF048O04+           TATCGGAAACAATGGCAATAATCAATAGGTTTCTGTGTGCTTCACTCTCGATTAATCACT
                      ____________________________________________________________
consensus             TATCGGAAACAATGGCAATAATCAATAGGTTTCTGTGTGCTTCACTCTCGATTAATCACT
 
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JMSF048O04+           TTTTTTTCTTGATAAATGGGAAGGAGGGAAGAAGGGTTTGAAGAAGTGGGTTTTTTGGTT
                      ____________________________________________________________
consensus             TTTTTTTCTTGATAAATGGGAAGGAGGGAAGAAGGGTTTGAAGAAGTGGGTTTTTTGGTT
 
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JMSF048O04+           GTTCGTCGATGTCTGGTTTTGAGGGTTCGGGAAATGCACGCGAAATGGGAAGGAAAGCCC
                      ____________________________________________________________
consensus             GTTCGTCGATGTCTGGTTTTGAGGGTTCGGGAAATGCACGCGAAATGGGAAGGAAAGCCC