Contig 013549:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF048K09Sequence681013549 (2)735013549 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF048K09- ATAAGAGTACGGGGTGCTATGCCACACCTGAGCTAGAG
                      ____________________________________________________________
consensus ATAAGAGTACGGGGTGCTATGCCACACCTGAGCTAGAG
 
. : . : . : . : . : . :
rJMSF048K09- AACTCAGGTGCACAGGATAACTAACTAAAATCCTCAATAACGTCAATACGTAAGCATGGC
                      ____________________________________________________________
consensus AACTCAGGTGCACAGGATAACTAACTAAAATCCTCAATAACGTCAATACGTAAGCATGGC
 
. : . : . : . : . : . :
rJMSF048K09- ACGCAGGCCGAAAGGGAAACTATCTACTCTACGCTCCAAGTCTATAGCACGCTCCAGTGT
JMSF048K09+ GTCTATAGCACGCTCCAGTGT
                      ____________________________________________________________
consensus ACGCAGGCCGAAAGGGAAACTATCTACTCTACGCTCCAAGTCTATAGCACGCTCCAGTGT
 
. : . : . : . : . : . :
rJMSF048K09- CTACTCATCTGTGCCTCATTCGCTTAACATCCAAAAACAACGCCAACTTAAGGCGAGGCT
JMSF048K09+ CTACTCATCTGTGCCTCATTCGCTTAACATCCAAAAACAACGCCAACTTAAGGCGAGGCT
                      ____________________________________________________________
consensus CTACTCATCTGTGCCTCATTCGCTTAACATCCAAAAACAACGCCAACTTAAGGCGAGGCT
 
. : . : . : . : . : . :
rJMSF048K09- CAACTCATAAGACAAACGGGAACCACTTCGCGTTATTCTTCTCCGCGTCTGTCCATGAGA
JMSF048K09+ CAACTCATAAGACAAACGGGAACCACTTCGCGTTATTCTTCTCCGCGTCTGTCCATGAGA
                      ____________________________________________________________
consensus CAACTCATAAGACAAACGGGAACCACTTCGCGTTATTCTTCTCCGCGTCTGTCCATGAGA
 
. : . : . : . : . : . :
rJMSF048K09- CCGCGGGTGCAACCATGGAAAACTCCCACCCGCGGCTCTGCCCGCTGCCACCAAGCCACG
JMSF048K09+ CCGCGGGTGCAACCATGGAAAACTCCCACCCGCGGCTCTGCCCGCTGCCACCAAGCCACG
                      ____________________________________________________________
consensus CCGCGGGTGCAACCATGGAAAACTCCCACCCGCGGCTCTGCCCGCTGCCACCAAGCCACG
 
. : . : . : . : . : . :
rJMSF048K09- ATATCGCCGGAGAAGCTACCACGCCGGGAACGGAGGAGAGACGCAATCACCGAGCTCCGT
JMSF048K09+ ATATCGCCGGAGAAGCTACCACGCCGGGAACGGAGGAGAGACGCAATCACCGAGCTCCGT
                      ____________________________________________________________
consensus ATATCGCCGGAGAAGCTACCACGCCGGGAACGGAGGAGAGACGCAATCACCGAGCTCCGT
 
. : . : . : . : . : . :
rJMSF048K09- CGATATCGCCACCGTCACGCATCACTGCCACGAGCCTCTGACCATCGCCTCTGCTTGTCT
JMSF048K09+ CGATATCGCCACCGTCACGCATCACTGCCACGAGCCTCTGACCATCGCCTCTGCTTGTCT
                      ____________________________________________________________
consensus CGATATCGCCACCGTCACGCATCACTGCCACGAGCCTCTGACCATCGCCTCTGCTTGTCT
 
. : . : . : . : . : . :
rJMSF048K09- CGCCTTGCTGCTACCAACTGAGGGTGTGAGAAGGAAGAAGATGCTTGGAAGGGGAGCTGC
JMSF048K09+ CGCCTTGCTGCTACCAACTGAGGGTGTGAGAAGGAAGAAGATGCTTGGAAGGGGAGCTGC
                      ____________________________________________________________
consensus CGCCTTGCTGCTACCAACTGAGGGTGTGAGAAGGAAGAAGATGCTTGGAAGGGGAGCTGC
 
. : . : . : . : . : . :
rJMSF048K09- CGGAGCTCTCTTGCCGCTACAAGGCTTCACCGGAAAACGAACCATGCCGCCGTGAACTGC
JMSF048K09+ CGGAGCTCTCTTGCCGCTACAAGGCTTCACCGGAAAACGAACCATGCCGCCGTGAACTGC
                      ____________________________________________________________
consensus CGGAGCTCTCTTGCCGCTACAAGGCTTCACCGGAAAACGAACCATGCCGCCGTGAACTGC
 
. : . : . : . : . : . :
rJMSF048K09- TTCGCACCGTCCAAGCTGCCACCACCGCCATCTTGCTCTGTCTCACGATGTTTCCGTCGA
JMSF048K09+ TTCGCACCGTCCAAGCTGCCACCACCGCCATCTTGCTCTGTCTCACGATGTTTCCGTCGA
                      ____________________________________________________________
consensus TTCGCACCGTCCAAGCTGCCACCACCGCCATCTTGCTCTGTCTCACGATGTTTCCGTCGA
 
. : . : . : . : . : . :
rJMSF048K09- CCAAGGGAGGTGCATGGTGGTTGTTGCTAACTGATGCTCTACCGCTGGTGGTCTGACTCC
JMSF048K09+ CCAAGGGAGGTGCATGGTGGTTGTTGCTAACTGATGCTCTACCGCTGGTGGTCTGACTCC
                      ____________________________________________________________
consensus CCAAGGGAGGTGCATGGTGGTTGTTGCTAACTGATGCTCTACCGCTGGTGGTCTGACTCC
 
. : . : . : . : . : . :
rJMSF048K09- GGGGTTGTCGCCGGTGGTCGAGAAGAGAAACGAGAAA
JMSF048K09+ GGGGTTGTCGCCGGTGGTCGAGAAGAGAAACGAGAAAAGGGTGGGGTTTGTCTATGGTGA
                      ____________________________________________________________
consensus GGGGTTGTCGCCGGTGGTCGAGAAGAGAAACGAGAAAAGGGTGGGGTTTGTCTATGGTGA
 
. : . : . : . : . : . :
JMSF048K09+ TGGAAGCTGCTGCAAAGTCTATCCACATACACACGCATAAGGATAAAATGTGGATAGCCC
                      ____________________________________________________________
consensus TGGAAGCTGCTGCAAAGTCTATCCACATACACACGCATAAGGATAAAATGTGGATAGCCC