| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF028M03 | Sequence | 534 | 013547 (8) | ref|XP_009604404.1| | 4e-118 | PREDICTED: proteasome subunit alpha type-7 [Nicotiana tomentosiformis] | |||||
| JMFF031D11 | Sequence | 565 | 013547 (8) | ref|XP_009604404.1| | 2e-126 | PREDICTED: proteasome subunit alpha type-7 [Nicotiana tomentosiformis] | 773 | 013547 (8) | ref|XP_009604404.1| | 4e-128 | PREDICTED: proteasome subunit alpha type-7 [Nicotiana tomentosiformis] |
| JMFN010F07 | Sequence | 627 | 013547 (8) | ref|XP_009604404.1| | 6e-148 | PREDICTED: proteasome subunit alpha type-7 [Nicotiana tomentosiformis] | |||||
| JMFN018F02 | Sequence | 630 | 013547 (8) | ref|XP_009795562.1| | 9e-141 | PREDICTED: proteasome subunit alpha type-7 [Nicotiana sylvestris] | |||||
| JMSF028K19 | Sequence | 681 | 012051 (5) | ref|XP_009792062.1| | 4e-63 | PREDICTED: monothiol glutaredoxin-S16, chloroplastic [Nicotiana sylvestris] | 716 | 013547 (8) | ref|XP_004134855.1| | 347 | PREDICTED: proteasome subunit alpha type-7-like [Cucumis sativus] ref|XP_0041588 |
| JMSF048C06 | Sequence | 690 | 013547 (8) | ref|XP_009604404.1| | 6e-144 | PREDICTED: proteasome subunit alpha type-7 [Nicotiana tomentosiformis] | 789 | 013547 (8) | ref|XP_009604404.1| | 2e-134 | PREDICTED: proteasome subunit alpha type-7 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMFF031D11- GTGTAATATAGG
____________________________________________________________
consensus GTGTAATATAGG
. : . : . : . : . : . :
rJMFF031D11- AAAAGTTCAGCAAATCACACTTTTTCTAACACCGGATTTAACAGTTCACATGTTGAAAGA
____________________________________________________________
consensus AAAAGTTCAGCAAATCACACTTTTTCTAACACCGGATTTAACAGTTCACATGTTGAAAGA
. : . : . : . : . : . :
rJMSF028K19- AA
rJMFF031D11- AGCATCAAAATAGTAGAGAGTTGTAGCTTCATAGAAGAACACGGTGCATTTTTTCTAGAA
rJMSF048C06- AA
____________________________________________________________
consensus AGCATCAAAATAGTAGAGAGTTGTAGCTTCATAGAAGAACACGGTGCATTTTTTCTAGAA
. : . : . : . : . : . :
rJMSF028K19- CTAGGTTTCCTTTGAAGGTGCCTTCTTGGCAGCTTCTGCAGCTGCTTTCTCTGCTTCAAT
rJMFF031D11- CTAGGTTTCCTTTGCCGGGCCCTTCTTCGCAGCTTCTGCAGCTGCTTTCTCTGCCTCAAT
rJMSF048C06- CTAGGTTTCCTTTGCCGGGCCCTTCTTCGCAGCTTCTGCAGCTGCTTTCTCTGCCTCAAT
____________________________________________________________
consensus CTAGGTTTCCTTTGCCGGGCCCTTCTTCGCAGCTTCTGCAGCTGCTTTCTCTGCCTCAAT
. : . : . : . : . : . :
rJMSF028K19- CTCGGCAACAATGGCATCAATCTCAGCTCCCTCAAGTTGCCGCAGTCCGTGCTCTCTTGT
rJMFF031D11- CTCAGCAACAATGGCATCAATTTCAGCTTCCTCTAGTTGTCTAAGTCCATGCTCCTTTGT
rJMSF048C06- CTCAGCAACAATGGCATCAATTTCAGCTTCCTCTAGTTGTCTAAGTCCATGCTCCTTTGT
____________________________________________________________
consensus CTCAGCAACAATGGCATCAATTTCAGCTTCCTCTAGTTGTCTAAGTCCATGCTCCTTTGT
. : . : . : . : . : . :
rJMSF028K19- CATCACAGCAACCTCTATGTTCTTTCCACCACTCTCAACAACTTCAAGCAAAGCACGAAT
rJMFF031D11- CATGACAGCAACTTCTATGTTCTTTCCACCACTCTCAACAACTTCAAGCAAAGCACGAAT
rJMSF048C06- CATGACAGCAACTTCTATGTTCTTTCCACCACTCTCAACAACTTCAAGCAAAGCACGAAT
JMFN010F07+ ATGTTCTTTCCACCACTCTCAACAACTTCAAGCAAAGCACGAAT
JMFN018F02+ CAAGCAAAGCACGAAT
JMSF048C06+ ACTCTCAACAACTTCAAGCAAAGCACGAAT
____________________________________________________________
consensus CATGACAGCAACTTCTATGTTCTTTCCACCACTCTCAACAACTTCAAGCAAAGCACGAAT
. : . : . : . : . : . :
rJMSF028K19- GGCTAGCTTCACAGTTTCTTGACCAGAGGTTTCCTTGTAGTTCTTCTCAAGGAACTCCCT
rJMFF031D11- GGCTAGCTTCACAGTTTCCTGGCCAGAGGTTTCCTTGTAGTTCTTCTCAAGAAACTCCCG
rJMSF048C06- GGCTAGCTTCACAGTTTCCTGGCCAGAGGTTTCCTTGTAGTTCTTCTCAAGAAACTCCCG
JMFN010F07+ GGCTAGCTTCACAGTTTCCTGGCCAGAGGTTTCCTTGTAGTTCTTCTCAAGAAACTCCCG
JMFF031D11+ TCTTCTCAAGAAACTCCCG
JMFN018F02+ GGCTAGCTTCACAGTTTCCTGGCCAGAGGTTTCCTTGTAGTTCTTCTCAAGAAACTCCCG
JMSF048C06+ GGCTAGCTTCACAGTTTCCTGGCCAGAGGTTTCCTTGTAGTTCTTCTCAAGAAACTCCCG
____________________________________________________________
consensus GGCTAGCTTCACAGTTTCCTGGCCAGAGGTTTCCTTGTAGTTCTTCTCAAGAAACTCCCG
. : . : . : . : . : . :
rJMSF028K19- GATTGAGTTGGAGTTTCTCCCAGTAGCATTGGCCTTCCATGCTGAAAAAGTTCCTGATGG
rJMFF031D11- GATTGAGTTGGAGTTCCTCCCAGTTGCATTGGCCTTCCATGCTGAAAAAGTACCTGATGG
rJMSF048C06- GATTGAGTTGGAGTTCCTCCCAGTTGCATTGGCCTTCCATGCTGAAAAAGTACCTGATGG
JMFN010F07+ GATTGAGTTGGAGTTCCTCCCAGTTGCATTGGCCTTCCATGCTGAAAAAGTACCTGATGG
JMFF031D11+ GATTGAGTTGGAGTTCCTCCCAGTTGCATTGGCCTTCCATGCTGAAAAAGTACCTGATGG
JMFF028M03+ TCCTCCCAGTTGCATTGGCCTTCCATGCTGAAAAAGTACCTGATGG
JMFN018F02+ GATTGAGTTGGAGTTCCTCCCAGTTGCATTGGCCTTCCATGCTGAAAAAGTACCTGATGG
JMSF048C06+ GATTGAGTTGGAGTTCCTCCCAGTTGCATTGGCCTTCCATGCTGAAAAAGTACCTGATGG
____________________________________________________________
consensus GATTGAGTTGGAGTTCCTCCCAGTTGCATTGGCCTTCCATGCTGAAAAAGTACCTGATGG
. : . : . : . : . : . :
rJMSF028K19- ATCTGTCTGATAAAGGGACGGGACGCCCGTGTATGGATCGAAACCAATAATCAAGGTTGA
rJMFF031D11- ATCTGTCTGATAAAGAGATGGAACACCTGTGTATGGGTCAAAACCAATAATCAAGGTAGA
rJMSF048C06- ATCTGTCTGATAAAGAGATGGAACACCTGTGTATGGGTCAAAACCAATAATCAAGGTAGA
JMFN010F07+ ATCTGTCTGATAAAGAGATGGAACACCTGTGTATGGGTCAAAACCAATAATCAAGGTAGA
JMFF031D11+ ATCTGTCTGATAAAGAGATGGAACACCTGTGTATGGGTCAAAACCAATAATCAAGGTAGA
JMFF028M03+ ATCTGTCTGATAAAGAGATGGAACACCTGTGTATGGGTCAAAACCAATAATCAAGGTAGA
JMFN018F02+ ATCTGTCTGATAAAGAGATGGAACACCTGTGTATGGGTCAAAACCAATAATCAAGGTAGA
JMSF048C06+ ATCTGTCTGATAAAGAGATGGAACACCTGTGTATGGGTCAAAACCAATAATCAAGGTAGA
____________________________________________________________
consensus ATCTGTCTGATAAAGAGATGGAACACCTGTGTATGGGTCAAAACCAATAATCAAGGTAGA
. : . : . : . : . : . :
rJMSF028K19- CAGCCCAAATGGTCTTACACCACCACTTTGAGTGTACTTTTGCTGAAGACCAGCAATATA
rJMFF031D11- AAGACCAAATGGTCTTACACCACCACTTTGAGTGTATTTTTGCTGAAGGCCAGCAATATA
rJMSF048C06- AAGACCAAATGGTCTTACACCACCACTTTGAGTGTATTTTTGCTGAAGGCCAGCAATATA
JMFN010F07+ AAGACCAAATGGTCTTACACCACCACTTTGAGTGTATTTTTGCTGAAGGCCAGCAATATA
JMFF031D11+ AAGACCAAATGGTCTTACACCACCACTTTGAGTGTATTTTTGCTGAAGGCCAGCAATATA
JMFF028M03+ AAGACCAAATGGTCTTACACCACCACTTTGAGTGTATTTTTGCTGAAGGCCAGCAATATA
JMFN018F02+ AAGACCAAATGGTCTTACACCACCACTTTGAGTGTATTTTTGCTGAAGGCCAGCAATATA
JMSF048C06+ AAGACCAAATGGTCTTACACCACCACTTTGAGTGTATTTTTGCTGAAGGCCAGCAATATA
____________________________________________________________
consensus AAGACCAAATGGTCTTACACCACCACTTTGAGTGTATTTTTGCTGAAGGCCAGCAATATA
. : . : . : . : . : . :
rJMSF028K19- ACGAGTTATGTACTCAACCGTAACGGGATCTTCCACTGTGAGTCTATGACTCTGACACTC
rJMFF031D11- GCGAGTTATGTACTCAACAGTTACAGGATCTTCCACAGTGAGCCTGTGACTCTGGCACTC
rJMSF048C06- GCGAGTTATGTACTCAACAGTTACAGGATCTTCCACAGTGAGCCTGTGACTCTGGCACTC
JMFN010F07+ GCGAGTTATGTACTCAACAGTTACAGGATCTTCCACAGTGAGCCTGTGACTCTGGCACTC
JMFF031D11+ GCGAGTTATGTACTCAACAGTTACAGGATCTTCCACAGTGAGCCTGTGACTCTGGCACTC
JMFF028M03+ GCGAGTTATGTACTCAACAGTTACAGGATCTTCCACAGTGAGCCTGTGACTCTGGCACTC
JMFN018F02+ GCGAGTTATGTACTCAACAGTTACAGGATCTTCCACAGTGAGCCTGTGACTCTGGCACTC
JMSF048C06+ GCGAGTTATGTACTCAACAGTTACAGGATCTTCCACAGTGAGCCTGTGACTCTGGCACTC
____________________________________________________________
consensus GCGAGTTATGTACTCAACAGTTACAGGATCTTCCACAGTGAGCCTGTGACTCTGGCACTC
. : . : . : . : . : . :
rJMSF028K19- AATGCGTGCCCTATTTACAAGGACACGGGCATCTGCTTTGAGTCCAGCACATGCCAATGC
rJMFF031D11- AATGCGTGCTCTATTTACAAGAACACGTGCATCTGCTTTAAGTCCAGCACAAGCCAATGC
rJMSF048C06- AATGCGTGCTCTATTTACAAGAACACGTGCATCTGCTTTAAGTCCAGCACAAGCCAATGC
JMFN010F07+ AATGCGTGCTCTATTTACAAGAACACGTGCATCTGCTTTAAGTCCAGCACAAGCCAATGC
JMFF031D11+ AATGCGTGCTCTATTTACAAGAACACGTGCATCTGCTTTAAGTCCAGCACAAGCCAATGC
JMFF028M03+ AATGCGTGCTCTATTTACAAGAACACGTGCATCTGCTTTAAGTCCAGCACAAGCCAATGC
JMFN018F02+ AATGCGTGCTCTATTTACAAGAACACGTGCATCTGCTTTAAGTCCAGCACAAGCCAATGC
JMSF048C06+ AATGCGTGCTCTATTTACAAGAACACGTGCATCTGCTTTAAGTCCAGCACAAGCCAATGC
____________________________________________________________
consensus AATGCGTGCTCTATTTACAAGAACACGTGCATCTGCTTTAAGTCCAGCACAAGCCAATGC
. : . : . : . : . : . :
rJMSF028K19- AATGTGATCATCTAGATTTAC
rJMFF031D11- AATGTGATCATCTAGATTTACGATTTTCCGTACAGATCTGGAATCCTGAAGCTTGGGAGT
rJMSF048C06- AATGTGATCATCTAGATTTACGATTTTCCGTACAGATCTGGAATCCTGAAGCTTGGGAGT
JMFN010F07+ AATGTGATCATCTAGATTTACGATTTTCCGTACAGATCTGGAATCCTGAAGCTTGGGAGT
JMFF031D11+ AATGTGATCATCTAGATTTACGATTTTCCGTACAGATCTGGAATCCTGAAGCTTGGGAGT
JMFF028M03+ AATGTGATCATCTAGATTTACGATTTTCCGTACAGATCTGGAATCCTGAAGCTTGGGAGT
JMFN018F02+ AATGTGATCATCTAGATTTACGATTTTCCGTACAGATCTGGAATCCTGAAGCTTGGGAGT
JMSF048C06+ AATGTGATCATCTAGATTTACGATTTTCCGTACAGATCTGGAATCCTGAAGCTTGGGAGT
____________________________________________________________
consensus AATGTGATCATCTAGATTTACGATTTTCCGTACAGATCTGGAATCCTGAAGCTTGGGAGT
. : . : . : . : . : . :
rJMFF031D11- AGACTTCTTCTCTACGCCGAGGACGACAGTATCTGTACCTC
rJMSF048C06- AGACTTCTTCTCTACGCCGAGGACGACAGTATCTGTACCTCGAACGCCCACTGCGGCGTN
JMFN010F07+ AGACTTCTTCTCTACGCCGAGGACGACAGTATCTGTACCTCGAACGCCCACTGCGGCGTT
JMFF031D11+ AGACTTCTTCTCTACGCCGAGGACGACAGTATCTGTACCTCGAACGCCCACTGCGGCGTT
JMFF028M03+ AGACTTCTTCTCTACGCCGAGGACGACAGTATCTGTACCTCGAACGCCCACTGCGGCGTT
JMFN018F02+ AGACTTCTTCTCTACGCCGAGGACGACAGTATCTGTACCTCGAACGCCCACTGCGGCGTT
JMSF048C06+ AGACTTCTTCTCTACGCCGAGGACGACAGTATCTGTACCTCGAACGCCCACTGCGGCGTT
____________________________________________________________
consensus AGACTTCTTCTCTACGCCGAGGACGACAGTATCTGTACCTCGAACGCCCACTGCGGCGTT
. : . : . : . : . : . :
rJMSF048C06- ACCCTTTCGTA
JMFN010F07+ ACCCTTTCGTACGGCTTCTAGGGCGTACTCCACCTGGAAAAGATGACCGTCCGGCGAGAA
JMFF031D11+ ACCCTTTCGTACGGCTTCTAGGGCGTACTCCACCTGGAAAAGATGACCGTCCGGCGAGAA
JMFF028M03+ ACCCTTTCGTACGGCTTCTAGGGCGTACTCCACCTGGAAAAGATGACCGTCCGGCGAGAA
JMFN018F02+ ACCCTTTCGTACGGCTTCTAGGGCGTACTCCACCTGGAAAAGATGACCGTCCGGCGAGAA
JMSF048C06+ ACCCTTTCGTACGGCTTCTAGGGCGTACTCCACCTGGAAAAGATGACCGTCCGGCGAGAA
____________________________________________________________
consensus ACCCTTTCGTACGGCTTCTAGGGCGTACTCCACCTGGAAAAGATGACCGTCCGGCGAGAA
. : . : . : . : . : . :
JMFN010F07+ AACGGTGATCGCTCTATCGTATCGTGCCATAACTTATCTTTTA
JMFF031D11+ AACGGTGATCGCTCTATCGTATCGTGCCATAACTTATCTTTTACTAGTTCGATTTAAGTT
JMFF028M03+ AACGGTGATCGCTCTATCGTATCGTGCCATAACTTATCTTTTACTAGTTCGATTTAAGTT
JMFN018F02+ AACGGTGATCGCTCTATCGTATCGTGCCATAACTTATCTTTTACTAGTTCGATTTAAGTT
JMSF048C06+ AACGGTGATCGCTCTATCGTATCGTGCCATAACTTATCTTTTACTAGTTCGATTTAAGTT
____________________________________________________________
consensus AACGGTGATCGCTCTATCGTATCGTGCCATAACTTATCTTTTACTAGTTCGATTTAAGTT
. : . : . : . : . : . :
JMFF031D11+ TGTTCC
JMFF028M03+ TGTTCC
JMFN018F02+ TGTTCC
JMSF048C06+ TGTTCCGGTTTCTGCCTCTCCGGTACCGCAAGTACTTTTCTAGGTTTCAAGACGTAGAGC
____________________________________________________________
consensus TGTTCCGGTTTCTGCCTCTCCGGTACCGCAAGTACTTTTCTAGGTTTCAAGACGTAGAGC