Contig 013544:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF021O10+                                 CTTCGGTGGCGTGAATTTCTGACTCGGGATTGACTGTC
                      ____________________________________________________________
consensus                                   CTTCGGTGGCGTGAATTTCTGACTCGGGATTGACTGTC
 
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JMSF021O10+           CCGGTAACCCGAGAACAACCCTCTTCTCGTTCACCTTCAGTCAATTCATTCTCGCCATCA
                      ____________________________________________________________
consensus             CCGGTAACCCGAGAACAACCCTCTTCTCGTTCACCTTCAGTCAATTCATTCTCGCCATCA
 
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JMSF021O10+           AACACTGATCCATCACGACTCTGTGCAGAATAACCACAATCATTGAAATGCTCGAAATCC
                      ____________________________________________________________
consensus             AACACTGATCCATCACGACTCTGTGCAGAATAACCACAATCATTGAAATGCTCGAAATCC
 
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JMSF021O10+           CCCTCGTACCCTGTACTCTCGGTCACACTAAAGTGTGCAGATTGCCCCGTGCTATTAACA
JMSF047O16+                            CTCGGTCACACTAAAGTGTGCAGANTGCCCCGTGCTATTAACA
                      ____________________________________________________________
consensus             CCCTCGTACCCTGTACTCTCGGTCACACTAAAGTGTGCAGATTGCCCCGTGCTATTAACA
 
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JMSF021O10+           TTCTCATCGTCCCGCTCACTATGAGCATTATTCTCAGATAGATCATTCCCGCTAGTTTGG
JMSF047O16+           TTCTCATCGTCCCGCTCACTATGAGCNNTATTCTCAGATAGATCATTCCCGCTAGTTTGG
                      ____________________________________________________________
consensus             TTCTCATCGTCCCGCTCACTATGAGCATTATTCTCAGATAGATCATTCCCGCTAGTTTGG
 
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JMSF021O10+           CACTCCGCTCCACCACTATTACGAGACTCGCAAGAACTCTGGCTTAAAAGCGCCCTCCGT
JMSF047O16+           CACTCCGCTCCACCACTATTACGAGACTCGCAAGAACTCTGGNTTAAAAGCGCCCTCCGT
                      ____________________________________________________________
consensus             CACTCCGCTCCACCACTATTACGAGACTCGCAAGAACTCTGGCTTAAAAGCGCCCTCCGT
 
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JMSF006P18+                                        CTCAATTACAGAACCCGGCTTCGAATATCTC
JMSF021O10+           TTAAAATGAGCCTCGAGTATCGCCTTTTTCTCAATTACAGAACCCGGCTTCGAATATCTC
JMSF047O16+           TTAAAATGAGCCTCGAGTATCGCCTTTTTCTCAATTACAGANCCCGGCTTCGAATATCTC
                      ____________________________________________________________
consensus             TTAAAATGAGCCTCGAGTATCGCCTTTTTCTCAATTACAGAACCCGGCTTCGAATATCTC
 
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JMSF006P18+           TCCACCTCTTCAAGGTACCTGTTATGCGAGAAAGAAGACCTCCTCTCCCAACACAAATCC
JMSF021O10+           TCCACCTCTTCAAGGTACCTGTTATGCGAGAAAGAAGACCTCCTCTCCCAACACAAATCC
JMSF047O16+           TCCACCTCTTCAAGGTACCTGTTATGCGAGANAGAAGACCTCNTCTCCCAACACAAATCN
                      ____________________________________________________________
consensus             TCCACCTCTTCAAGGTACCTGTTATGCGAGAAAGAAGACCTCCTCTCCCAACACAAATCC
 
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JMSF006P18+           TCATTCTTAAACCGCCCAAATGAGATCGAACCCGAGTGAAGAGAATCCGCCTGGAAATTA
JMSF021O10+           TCATTCTTAAACCGCCCAAATGAGATCGAACCCGAGTGAAGAGAATCCGCCTGGAAATTA
JMSF047O16+           TCNTTNTTAAACCGCCCAAATGAGATCGAACCCGAGTGAAGAGANTCCGCCNGGAAATTA
                      ____________________________________________________________
consensus             TCATTCTTAAACCGCCCAAATGAGATCGAACCCGAGTGAAGAGAATCCGCCTGGAAATTA
 
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JMSF006P18+           TGCCTGAAAGGCTCTTCAATCTCACCCGCCATTTTCAACTGATAACCCCCCAATTCACAC
JMSF021O10+           TGCCTGAAAGGCTCTTCAATCTCACCCGCCATTTTCAACTGATAACCCCCCAATTCACAC
JMSF047O16+           TGCNTGAAAGGCTCTTCAATCTCNCCCGCCATTTTCAACTGATAACCCCCCAATTCACAC
                      ____________________________________________________________
consensus             TGCCTGAAAGGCTCTTCAATCTCACCCGCCATTTTCAACTGATAACCCCCCAATTCACAC
 
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JMSF006P18+           CCTTTTT                                                     
JMSF021O10+           CCTTTTT                                                     
JMSF047O16+           CCTTTTTNTGCATTTTTCAGTNACCGACAATAATTAAAACTCANCCCACAAATTATAGAT
                      ____________________________________________________________
consensus             CCTTTTTNTGCATTTTTCAGTNACCGACAATAATTAAAACTCANCCCACAAATTATAGAT
 
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JMSF047O16+           ANTAAATTTTTTAAAATTAAATAAATAAATTACANGCNCACACAATATCCAAAGANGAAA
                      ____________________________________________________________
consensus             ANTAAATTTTTTAAAATTAAATAAATAAATTACANGCNCACACAATATCCAAAGANGAAA
 
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JMSF047O16+           TCCACTGCCAAAAATGTGTGAGCANACANTCGGAAAAAAAGATGAAAACCATCAACTTAA
                      ____________________________________________________________
consensus             TCCACTGCCAAAAATGTGTGAGCANACANTCGGAAAAAAAGATGAAAACCATCAACTTAA
 
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JMSF047O16+           ATGGNNTATATAAAACANCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATCACATC
                      ____________________________________________________________
consensus             ATGGNNTATATAAAACANCAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATCACATC