Contig 013539:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF047A23Sequence685013539 (2)ref|XP_006349492.1|7e-99PREDICTED: tropinone reductase homolog [Solanum tuberosum]754013539 (2)ref|XP_009773607.1|7e-96PREDICTED: tropinone reductase homolog [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMSF047A23-                                 ATGCAACAACATATTCATATCAGATTACAAGATGAAA
                      ____________________________________________________________
consensus                                    ATGCAACAACATATTCATATCAGATTACAAGATGAAA
 
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rJMSF047A23-          TACAAAAATTTAGATCGACAACCCTTCTTTATTGCGCCCTATTAAACTTATTAGGAAGGA
                      ____________________________________________________________
consensus             TACAAAAATTTAGATCGACAACCCTTCTTTATTGCGCCCTATTAAACTTATTAGGAAGGA
 
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rJMSF047A23-          AAATAGAAATAAGGTAGGATTAGTACGTTGTATGAAAATACAATACAAATGGTACTATAT
                      ____________________________________________________________
consensus             AAATAGAAATAAGGTAGGATTAGTACGTTGTATGAAAATACAATACAAATGGTACTATAT
 
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rJMSF047A23-          ATCTAGAAATGGAAAGCACCGGCGGTGTAGCCTCCATCAATTTGGACAACCTGACCGGTG
                      ____________________________________________________________
consensus             ATCTAGAAATGGAAAGCACCGGCGGTGTAGCCTCCATCAATTTGGACAACCTGACCGGTG
 
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rJMSF047A23-          ATGTGGGAAGCAGCCGGCAGGCAAAAAAATGCCACCAACGGCGATATCTCGTCGGCTTCT
                      ____________________________________________________________
consensus             ATGTGGGAAGCAGCCGGCAGGCAAAAAAATGCCACCAACGGCGATATCTCGTCGGCTTCT
 
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rJMSF047A23-          GCCAACGGCTTCACTGGAGTTCTCATCATAATTGGACCAAACATTGCCTGTATTGCCGGA
                      ____________________________________________________________
consensus             GCCAACGGCTTCACTGGAGTTCTCATCATAATTGGACCAAACATTGCCTGTATTGCCGGA
 
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rJMSF047A23-          TCAATGTCTTCAGGCTTCATGATTGTGGTTTTGACGGCCCAGGGTGAAACCGTGTTGACT
JMSF047A23+                                              GGCCCAGGGTGAAACCGTGTTGACT
                      ____________________________________________________________
consensus             TCAATGTCTTCAGGCTTCATGATTGTGGTTTTGACGGCCCAGGGTGAAACCGTGTTGACT
 
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rJMSF047A23-          CGGATGCCATCCTTTGCCCATTCACATGCCAGATTCTTGGTCAACTGGTTTATAGCAGCT
JMSF047A23+           CGGATGCCATCCTTTGCCCATTCACATGCCAGATTCTTGGTCAACTGGTTTATAGCAGCT
                      ____________________________________________________________
consensus             CGGATGCCATCCTTTGCCCATTCACATGCCAGATTCTTGGTCAACTGGTTTATAGCAGCT
 
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rJMSF047A23-          TTAGAGCTTCCATAAATGGAGAGGGCAGGCAATGCAGTGGCGCCAGCCATAGAGGAGATG
JMSF047A23+           TTAGAGCTTCCATAAATGGAGAGGGCAGGCAATGCAGTGGCGCCAGCCATAGAGGAGATG
                      ____________________________________________________________
consensus             TTAGAGCTTCCATAAATGGAGAGGGCAGGCAATGCAGTGGCGCCAGCCATAGAGGAGATG
 
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rJMSF047A23-          AAAACAATGCTTGCGTTTCCAGATGCCTTGAGGAGGGGGTAAGACAGTTGTGCCAAGTGG
JMSF047A23+           AAAACAATGCTTGCGTTTCCAGATGCCTTGAGGAGGGGGTAAGACAGTTGTGCCAAGTGG
                      ____________________________________________________________
consensus             AAAACAATGCTTGCGTTTCCAGATGCCTTGAGGAGGGGGTAAGACAGTTGTGCCAAGTGG
 
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rJMSF047A23-          TATGGTGACTCAAAATTTGTTTGAATTATGTTTGAAAATTCCTCGGGATTATAGTCATTC
JMSF047A23+           TATGGTGACTCAAAATTTGTTTGAATTATGTTTGAAAATTCCTCGGGATTATAGTCATTC
                      ____________________________________________________________
consensus             TATGGTGACTCAAAATTTGTTTGAATTATGTTTGAAAATTCCTCGGGATTATAGTCATTC
 
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rJMSF047A23-          GCTTTCCTCATCTTACTAATTGCTGCATTGTTCACAAGGATGTTAAGCTTGCCATTGAAG
JMSF047A23+           GCTTTCCTCATCTTACTAATTGCTGCATTGTTCACAAGGATGTTAAGCTTGCCATTGAAG
                      ____________________________________________________________
consensus             GCTTTCCTCATCTTACTAATTGCTGCATTGTTCACAAGGATGTTAAGCTTGCCATTGAAG
 
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rJMSF047A23-          ACAGAGGAGACGGCCTCGATGAGCTCCACCCTCTGTTCCCTGGACGACAGGTCACAA   
JMSF047A23+           ACAGAGGAGACGGCCTCGATGAGCTCCACCCTCTGTTCCCTGGACGACAGGTCACAAACG
                      ____________________________________________________________
consensus             ACAGAGGAGACGGCCTCGATGAGCTCCACCCTCTGTTCCCTGGACGACAGGTCACAAACG
 
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JMSF047A23+           GAGCCGGTGACTTTGAAGCCTTTTGCCTGCCATTCCCGGACCTTTTCGTCGAGCTCCGTC
                      ____________________________________________________________
consensus             GAGCCGGTGACTTTGAAGCCTTTTGCCTGCCATTCCCGGACCTTTTCGTCGAGCTCCGTC
 
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JMSF047A23+           TGATTCCGGGAGCACGTGTGGACTGCGGCTCCGAATCCGGCCAGTTCCTCGACTATAGCA
                      ____________________________________________________________
consensus             TGATTCCGGGAGCACGTGTGGACTGCGGCTCCGAATCCGGCCAGTTCCTCGACTATAGCA
 
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JMSF047A23+           GCCCCTATGCCTCTGGTTCCGCCGGAAACCAGAGCCGTCTTCCCCTGAAGAGACCATCTT
                      ____________________________________________________________
consensus             GCCCCTATGCCTCTGGTTCCGCCGGAAACCAGAGCCGTCTTCCCCTGAAGAGACCATCTT
 
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JMSF047A23+           GAGGTCCTCTGGTTGCACTGCTCTCCTTCACCAGACATGTCTGACCTTCTGTACAAATGG
                      ____________________________________________________________
consensus             GAGGTCCTCTGGTTGCACTGCTCTCCTTCACCAGACATGTCTGACCTTCTGTACAAATGG
 
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JMSF047A23+           TGTTTGTTCTTGAAGTAGAATACAGTCAGAGTAGGATGGCTACTTTACTGCTCTTGTTTC
                      ____________________________________________________________
consensus             TGTTTGTTCTTGAAGTAGAATACAGTCAGAGTAGGATGGCTACTTTACTGCTCTTGTTTC