Contig 013539:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF047A23Sequence685013539 (2)ref|XP_006349492.1|7e-99PREDICTED: tropinone reductase homolog [Solanum tuberosum]754013539 (2)ref|XP_009773607.1|7e-96PREDICTED: tropinone reductase homolog [Nicotiana sylvestris]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF047A23- ATGCAACAACATATTCATATCAGATTACAAGATGAAA
                      ____________________________________________________________
consensus ATGCAACAACATATTCATATCAGATTACAAGATGAAA
 
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rJMSF047A23- TACAAAAATTTAGATCGACAACCCTTCTTTATTGCGCCCTATTAAACTTATTAGGAAGGA
                      ____________________________________________________________
consensus TACAAAAATTTAGATCGACAACCCTTCTTTATTGCGCCCTATTAAACTTATTAGGAAGGA
 
. : . : . : . : . : . :
rJMSF047A23- AAATAGAAATAAGGTAGGATTAGTACGTTGTATGAAAATACAATACAAATGGTACTATAT
                      ____________________________________________________________
consensus AAATAGAAATAAGGTAGGATTAGTACGTTGTATGAAAATACAATACAAATGGTACTATAT
 
. : . : . : . : . : . :
rJMSF047A23- ATCTAGAAATGGAAAGCACCGGCGGTGTAGCCTCCATCAATTTGGACAACCTGACCGGTG
                      ____________________________________________________________
consensus ATCTAGAAATGGAAAGCACCGGCGGTGTAGCCTCCATCAATTTGGACAACCTGACCGGTG
 
. : . : . : . : . : . :
rJMSF047A23- ATGTGGGAAGCAGCCGGCAGGCAAAAAAATGCCACCAACGGCGATATCTCGTCGGCTTCT
                      ____________________________________________________________
consensus ATGTGGGAAGCAGCCGGCAGGCAAAAAAATGCCACCAACGGCGATATCTCGTCGGCTTCT
 
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rJMSF047A23- GCCAACGGCTTCACTGGAGTTCTCATCATAATTGGACCAAACATTGCCTGTATTGCCGGA
                      ____________________________________________________________
consensus GCCAACGGCTTCACTGGAGTTCTCATCATAATTGGACCAAACATTGCCTGTATTGCCGGA
 
. : . : . : . : . : . :
rJMSF047A23- TCAATGTCTTCAGGCTTCATGATTGTGGTTTTGACGGCCCAGGGTGAAACCGTGTTGACT
JMSF047A23+ GGCCCAGGGTGAAACCGTGTTGACT
                      ____________________________________________________________
consensus TCAATGTCTTCAGGCTTCATGATTGTGGTTTTGACGGCCCAGGGTGAAACCGTGTTGACT
 
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rJMSF047A23- CGGATGCCATCCTTTGCCCATTCACATGCCAGATTCTTGGTCAACTGGTTTATAGCAGCT
JMSF047A23+ CGGATGCCATCCTTTGCCCATTCACATGCCAGATTCTTGGTCAACTGGTTTATAGCAGCT
                      ____________________________________________________________
consensus CGGATGCCATCCTTTGCCCATTCACATGCCAGATTCTTGGTCAACTGGTTTATAGCAGCT
 
. : . : . : . : . : . :
rJMSF047A23- TTAGAGCTTCCATAAATGGAGAGGGCAGGCAATGCAGTGGCGCCAGCCATAGAGGAGATG
JMSF047A23+ TTAGAGCTTCCATAAATGGAGAGGGCAGGCAATGCAGTGGCGCCAGCCATAGAGGAGATG
                      ____________________________________________________________
consensus TTAGAGCTTCCATAAATGGAGAGGGCAGGCAATGCAGTGGCGCCAGCCATAGAGGAGATG
 
. : . : . : . : . : . :
rJMSF047A23- AAAACAATGCTTGCGTTTCCAGATGCCTTGAGGAGGGGGTAAGACAGTTGTGCCAAGTGG
JMSF047A23+ AAAACAATGCTTGCGTTTCCAGATGCCTTGAGGAGGGGGTAAGACAGTTGTGCCAAGTGG
                      ____________________________________________________________
consensus AAAACAATGCTTGCGTTTCCAGATGCCTTGAGGAGGGGGTAAGACAGTTGTGCCAAGTGG
 
. : . : . : . : . : . :
rJMSF047A23- TATGGTGACTCAAAATTTGTTTGAATTATGTTTGAAAATTCCTCGGGATTATAGTCATTC
JMSF047A23+ TATGGTGACTCAAAATTTGTTTGAATTATGTTTGAAAATTCCTCGGGATTATAGTCATTC
                      ____________________________________________________________
consensus TATGGTGACTCAAAATTTGTTTGAATTATGTTTGAAAATTCCTCGGGATTATAGTCATTC
 
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rJMSF047A23- GCTTTCCTCATCTTACTAATTGCTGCATTGTTCACAAGGATGTTAAGCTTGCCATTGAAG
JMSF047A23+ GCTTTCCTCATCTTACTAATTGCTGCATTGTTCACAAGGATGTTAAGCTTGCCATTGAAG
                      ____________________________________________________________
consensus GCTTTCCTCATCTTACTAATTGCTGCATTGTTCACAAGGATGTTAAGCTTGCCATTGAAG
 
. : . : . : . : . : . :
rJMSF047A23- ACAGAGGAGACGGCCTCGATGAGCTCCACCCTCTGTTCCCTGGACGACAGGTCACAA
JMSF047A23+ ACAGAGGAGACGGCCTCGATGAGCTCCACCCTCTGTTCCCTGGACGACAGGTCACAAACG
                      ____________________________________________________________
consensus ACAGAGGAGACGGCCTCGATGAGCTCCACCCTCTGTTCCCTGGACGACAGGTCACAAACG
 
. : . : . : . : . : . :
JMSF047A23+ GAGCCGGTGACTTTGAAGCCTTTTGCCTGCCATTCCCGGACCTTTTCGTCGAGCTCCGTC
                      ____________________________________________________________
consensus GAGCCGGTGACTTTGAAGCCTTTTGCCTGCCATTCCCGGACCTTTTCGTCGAGCTCCGTC
 
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JMSF047A23+ TGATTCCGGGAGCACGTGTGGACTGCGGCTCCGAATCCGGCCAGTTCCTCGACTATAGCA
                      ____________________________________________________________
consensus TGATTCCGGGAGCACGTGTGGACTGCGGCTCCGAATCCGGCCAGTTCCTCGACTATAGCA
 
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JMSF047A23+ GCCCCTATGCCTCTGGTTCCGCCGGAAACCAGAGCCGTCTTCCCCTGAAGAGACCATCTT
                      ____________________________________________________________
consensus GCCCCTATGCCTCTGGTTCCGCCGGAAACCAGAGCCGTCTTCCCCTGAAGAGACCATCTT
 
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JMSF047A23+ GAGGTCCTCTGGTTGCACTGCTCTCCTTCACCAGACATGTCTGACCTTCTGTACAAATGG
                      ____________________________________________________________
consensus GAGGTCCTCTGGTTGCACTGCTCTCCTTCACCAGACATGTCTGACCTTCTGTACAAATGG
 
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JMSF047A23+ TGTTTGTTCTTGAAGTAGAATACAGTCAGAGTAGGATGGCTACTTTACTGCTCTTGTTTC
                      ____________________________________________________________
consensus TGTTTGTTCTTGAAGTAGAATACAGTCAGAGTAGGATGGCTACTTTACTGCTCTTGTTTC