Contig 013537:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF046N06Sequence764013537 (2)ref|XP_010091425.1|4e-83hypothetical protein L484_013880 [Morus notabilis] gb|EXB44462.1| hypothetical p765013537 (2)ref|XP_004229177.1|2e-45PREDICTED: uncharacterized protein LOC101259480 isoform X1 [Solanum lycopersicu

Alignment

This contig is upended


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rJMSF046N06-              GGTGAGACCCAAGTAACAAATACCTTCTTCCAGGAAAGGCTATTGGGCTAGAGCTA
                      ____________________________________________________________
consensus                 GGTGAGACCCAAGTAACAAATACCTTCTTCCAGGAAAGGCTATTGGGCTAGAGCTA
 
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rJMSF046N06-          AAAGCCTAAAACACCAAGTAACAAATACCTTCTTCCAGGAAAGGCTATTGGGCTAGAGCT
                      ____________________________________________________________
consensus             AAAGCCTAAAACACCAAGTAACAAATACCTTCTTCCAGGAAAGGCTATTGGGCTAGAGCT
 
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rJMSF046N06-          AAAAGCCTAAAACCACAATACATATCATCGATGATGCGTCGTCGGTCGTCAATTAAGATT
                      ____________________________________________________________
consensus             AAAAGCCTAAAACCACAATACATATCATCGATGATGCGTCGTCGGTCGTCAATTAAGATT
 
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rJMSF046N06-          ATGAAAATTCATCTCAACAAGCCAAGTACAAATATAAGCACACCTATATAAGCACACCTA
                      ____________________________________________________________
consensus             ATGAAAATTCATCTCAACAAGCCAAGTACAAATATAAGCACACCTATATAAGCACACCTA
 
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rJMSF046N06-          ACTAACTATTCATCATCGCTTTCATCACTGTATTGAACTAAACTACCATTTGCAACAGAA
                      ____________________________________________________________
consensus             ACTAACTATTCATCATCGCTTTCATCACTGTATTGAACTAAACTACCATTTGCAACAGAA
 
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rJMSF046N06-          CCAGACTTGTCATCATCACCTTCAGTCATTCCTGTTTTCATGTATCCATGGGACTCCTGT
JMSF046N06+                          TCACCTTCAGTCATTCCTGTTTTCANGTATCCATGGGANTCCTGT
                      ____________________________________________________________
consensus             CCAGACTTGTCATCATCACCTTCAGTCATTCCTGTTTTCATGTATCCATGGGACTCCTGT
 
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rJMSF046N06-          GTGTGACAAGACTCTTTTGCATTACCATAAGACGTTGTCCTAGCCATCAAAGATGCTTCA
JMSF046N06+           GTGTGACAAGACTCTTTTGCATTACCATAAGACGTTGTCCTAGCCATCAAAGATGCTTCA
                      ____________________________________________________________
consensus             GTGTGACAAGACTCTTTTGCATTACCATAAGACGTTGTCCTAGCCATCAAAGATGCTTCA
 
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rJMSF046N06-          GAATTTGCATCATCTACCTTAGCTTTCTTCACTTGTGGCTTAACTTTTATCAACATTCCC
JMSF046N06+           GAATTTGCATCATCTACCTTAGCTTTCTTCACTTGTGGCTTAACTTTTATCAACATTCCC
                      ____________________________________________________________
consensus             GAATTTGCATCATCTACCTTAGCTTTCTTCACTTGTGGCTTAACTTTTATCAACATTCCC
 
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rJMSF046N06-          AAGGGCTTGGCTGGAGGATTTTTCCTCCCACCACTTCTTTGTTCCTGAATTTTAGGAGAT
JMSF046N06+           AAGGGCTTGGCTGGAGGATTTTTCCTCCCACCACTTCTTTGTTCCTGAATTTTAGGAGAT
                      ____________________________________________________________
consensus             AAGGGCTTGGCTGGAGGATTTTTCCTCCCACCACTTCTTTGTTCCTGAATTTTAGGAGAT
 
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rJMSF046N06-          ATCTCCTTGAGCTCATGTACAGTGATAGACTGTGCAGCAACTGCAGCCTGAAAACTTCGC
JMSF046N06+           ATCTCCTTGAGCTCATGTACAGTGATAGACTGTGCAGCAACTGCAGCCTGAAAACTTCGC
                      ____________________________________________________________
consensus             ATCTCCTTGAGCTCATGTACAGTGATAGACTGTGCAGCAACTGCAGCCTGAAAACTTCGC
 
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rJMSF046N06-          AGCTGCTTTGCTTCTTCATCAACCAGTTGTCGTTCATATTCTTGCCTCGACGCCTCAAGT
JMSF046N06+           AGCTGCTTTGCTTCTTCATCAACCAGTTGTCGTTCATATTCTTGCCTCGACGCCTCAAGT
                      ____________________________________________________________
consensus             AGCTGCTTTGCTTCTTCATCAACCAGTTGTCGTTCATATTCTTGCCTCGACGCCTCAAGT
 
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rJMSF046N06-          TTATCTAAAAACTCAGTTTCATCCTCATCCAGTGCTTTGGGGGGGTCTGTGCTTGAAGCG
JMSF046N06+           TTATCTAAAAACTCAGTTTCATCCTCATCCAGTGCTTT-GGGGGGTCTGTGCTTGAAGCG
                      ____________________________________________________________
consensus             TTATCTAAAAACTCAGTTTCATCCTCATCCAGTGCTTTGGGGGGGTCTGTGCTTGAAGCG
 
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rJMSF046N06-          TTCGTTGAATTCAGCATCTTTCTTGTCCTTGNTCTCC                       
JMSF046N06+           TTCGTTGAATTCAGCATCTTTCTTGTCCTTGTTCTCCTTTAAAATCTCGTACAGGGACCT
                      ____________________________________________________________
consensus             TTCGTTGAATTCAGCATCTTTCTTGTCCTTGTTCTCCTTTAAAATCTCGTACAGGGACCT
 
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JMSF046N06+           ATCTCTTTGGGCAGTTCCGTCCTCAACCCGAGCGCCACGGGATCTCCTAGCCTCTTCTAA
                      ____________________________________________________________
consensus             ATCTCTTTGGGCAGTTCCGTCCTCAACCCGAGCGCCACGGGATCTCCTAGCCTCTTCTAA
 
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JMSF046N06+           CTGCTCTTCAGATACAAAATTCATCAATCTCACCGGAGCCGCAGAATGGCCTAACTCCTC
                      ____________________________________________________________
consensus             CTGCTCTTCAGATACAAAATTCATCAATCTCACCGGAGCCGCAGAATGGCCTAACTCCTC
 
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JMSF046N06+           CTCCCCGTCTCCCCCCGCCATCTCTCTCTCTCTCTCAGCAACGATAATCCGCTTATAGTT
                      ____________________________________________________________
consensus             CTCCCCGTCTCCCCCCGCCATCTCTCTCTCTCTCTCAGCAACGATAATCCGCTTATAGTT
 
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JMSF046N06+           ATTGAAGTATAGACTGCACACCCAACCCAACCGAACCCTACCCACGCGGTATTCCGTAAA
                      ____________________________________________________________
consensus             ATTGAAGTATAGACTGCACACCCAACCCAACCGAACCCTACCCACGCGGTATTCCGTAAA
 
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JMSF046N06+           CAGAGCAGCTCTTGGATACTGATGGACTATGATGCTTCCCAATTCGTAGGACAATACACC
                      ____________________________________________________________
consensus             CAGAGCAGCTCTTGGATACTGATGGACTATGATGCTTCCCAATTCGTAGGACAATACACC