Contig 013536:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012C22Sequence416013536 (8)701020160emb|CAN79779.1|5e-44hypothetical protein VITISV_013617 [Vitis vinifera]
JMFS038A11Sequence459013536 (8)
JMFS068G07Sequence486013536 (8)
JMFS118C07Sequence475013536 (8)
JMSF005L03Sequence360013536 (8)238018118
JMSF040E03Sequence467013536 (8)891002951 (2)ref|XP_006290549.1|1e-24hypothetical protein CARUB_v10016632mg [Capsella rubella] gb|EOA23447.1| hypothe
JMSF046K24Sequence515013536 (8)705011738 (9)ref|XP_010659215.1|1e-26PREDICTED: protein transport protein SEC31 homolog B isoform X1 [Vitis vinifera
JMSF052A08Sequence475013536 (8)734002951 (2)ref|XP_006290549.1|7e-25hypothetical protein CARUB_v10016632mg [Capsella rubella] gb|EOA23447.1| hypothe

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF052A08+ ANNTTTTTGGGGGGGGGGGGGGGGGGGCGAAATCCCGCCCCAAACCGGTACGGCG
JMSF040E03+ GGGGGGGGGGGGGGGGGGGCGAAATCCCGCCCCAAANCGGTACGGCG
JMFS038A11+ CCGCCCAAACGGTACGGCG
JMFS118C07+ CGGTACGGCG
JMFS068G07+ CGGTACGGCG
JMSF046K24+ CGGTACGGCG
                      ____________________________________________________________
consensus ANNTTTTTGGGGGGGGGGGGGGGGGGGCGAAATCCCGCCCCAAACCGGTACGGCG
 
. : . : . : . : . : . :
JMSF052A08+ TCGTTTGAGGCAAATGCAATGGGATTAAAATTTAGTAAATCGTGCTAGCCATCCTTTGTT
JMFF012C22+ TCGTTTGAGGCAAATGCAATGGGATTAAAATTTAGTAAATCGTGCTAGCCATCCTTTGTT
JMSF040E03+ TCGTTTGAGGCAAATGCAATGGGATTAAAATTTAGTAAATCGTGCTAGCCATCCTTTGTT
JMFS038A11+ TCGTTTGAGGCAAATGCAATGGGATTAAAATTTAGTAAATCGTGCTAGCCATCCTTTGTT
JMFS118C07+ TCGTTTGAGGCAAATGCAATGGGATTAAAATTTAGTAAATCGTGCTAGCCATCCTTTGTT
JMFS068G07+ TCGTTTGAGGCAAATGCAATGGGATTAAAATTTAGTAAATCGTGCTAGCCATCCTTTGTT
JMSF046K24+ TCGTTTGAGGCAAATGCAATGGGATTAAAATTTAGTAAATCGTGCTAGCCATCCTTTGTT
                      ____________________________________________________________
consensus TCGTTTGAGGCAAATGCAATGGGATTAAAATTTAGTAAATCGTGCTAGCCATCCTTTGTT
 
. : . : . : . : . : . :
JMSF052A08+ CATAAATTGTTTACACAGCGCCACAGCCTTTTGAATTGCATCAGATCTGTAAGATAGATC
JMFF012C22+ CATAAATTGTTTACACAGCGCCACAGCCTTTTGAATTGCATCAGATCTGTAAGATAGATC
JMSF040E03+ CATAAATTGTTTACACAGCGCCACAGCCTTTTGAATTGCATCAGATCTGTAAGATAGATC
JMFS038A11+ CATAAATTGTTTACACAGCGCCACAGCCTTTTGAATTGCATCAGATCTGTAAGATAGATC
JMFS118C07+ CATAAATTGTTTACACAGCGCCACAGCCTTTTGAATTGCATCAGATCTGTAAGATAGATC
JMFS068G07+ CATAAATTGTTTACACAGCGCCACAGCCTTTTGAATTGCATCAGATCTGTAAGATAGATC
JMSF005L03+ ATCTGTAAGATAGATC
JMSF046K24+ CATAAATTGTTTACACAGCGCCACAGCCTTTTGAATTGCATCAGATCTGTAAGATAGATC
                      ____________________________________________________________
consensus CATAAATTGTTTACACAGCGCCACAGCCTTTTGAATTGCATCAGATCTGTAAGATAGATC
 
. : . : . : . : . : . :
JMSF052A08+ AAGAGTTGTCCATAGTCTTTATGCATGCTCCAGATCTATGAGTCCTATCAAAACCTATCG
JMFF012C22+ AAGAGTTGTCCATAGTCTTTATGCATGCTCCAGATCTATGAGTCCTATCAAAACCTATCG
JMSF040E03+ AAGAGTTGTCCATAGTCTTTATGCATGCTCCAGATCTATGAGTCCTATCAAAACCTATCG
JMFS038A11+ AAGAGTTGTCCATAGTCTTTATGCATGCTCCAGATCTATGAGTCCTATCAAAACCTATCG
JMFS118C07+ AAGAGTTGTCCATAGTCTTTATGCATGCTCCAGATCTATGAGTCCTATCAAAACCTATCG
JMFS068G07+ AAGAGTTGTCCATAGTCTTTATGCATGCTCCAGATCTATGAGTCCTATCAAAACCTATCG
JMSF005L03+ AAGAGTTGTCCATAGTCTTTATGCATGCTCCAGATCTATGAGTCCTATCAAAACCTATCG
JMSF046K24+ AAGAGTTGTCCATAGTCTTTATGCATGCTCCAGATCTATGAGTCCTATCAAAACCTATCG
                      ____________________________________________________________
consensus AAGAGTTGTCCATAGTCTTTATGCATGCTCCAGATCTATGAGTCCTATCAAAACCTATCG
 
. : . : . : . : . : . :
JMSF052A08+ CCATTTTCTCTTTCTGCAATTTAGCGCCTTTGGTACTCTATTTTTCAATCTGTGTTCTTC
JMFF012C22+ CCATTTTCTCTTTCTGCAATTTAGCGCCTTTGGTACTCTATTTTTCAATCTGTGTTCTTC
JMSF040E03+ CCATTTTCTCTTTCTGCAATTTAGCGCCTTTGGTACTCTATTTTTCAATCTGTGTTCTTC
JMFS038A11+ CCATTTTCTCTTTCTGCAATTTAGCGCCTTTGGTACTCTATTTTTCAATCTGTGTTCTTC
JMFS118C07+ CCATTTTCTCTTTCTGCAATTTAGCGCCTTTGGTACTCTATTTTTCAATCTGTGTTCTTC
JMFS068G07+ CCATTTTCTCTTTCTGCAATTTAGCGCCTTTGGTACTCTATTTTTCAATCTGTGTTCTTC
JMSF005L03+ CCATTTTCTCTTTCTGCAATTTAGCGCCTTTGGTACTCTATTTTTCAATCTGTGTTCTTC
JMSF046K24+ CCATTTTCTCTTTCTGCAATTTAGCGCCTTTGGTACTCTATTTTTCAATCTGTGTTCTTC
                      ____________________________________________________________
consensus CCATTTTCTCTTTCTGCAATTTAGCGCCTTTGGTACTCTATTTTTCAATCTGTGTTCTTC
 
. : . : . : . : . : . :
JMSF052A08+ GATCAAGTAATAAACAATGAATAGTACAAAAGATAGATATAGAGATGTATCTAAAATTTT
JMFF012C22+ GATCAAGTAATAAACAATGAATAGTACAAAAGATAGATATAGAGATGTATCTAAAATTTT
JMSF040E03+ GATCAAGTAATAAACAATGAATAGTACAAAAGATAGATATAGAGATGTATCTAAAATTTT
JMFS038A11+ GATCAAGTAATAAACAATGAATAGTACAAAAGATAGATATAGAGATGTATCTAAAATTTT
JMFS118C07+ GATCAAGTAATAAACAATGAATAGTACAAAAGATAGATATAGAGATGTATCTAAAATTTT
JMFS068G07+ GATCAAGTAATAAACAATGAATAGTACAAAAGATAGATATAGAGATGTATCTAAAATTTT
JMSF005L03+ GATCAAGTAATAAACAATGAATAGTACAAAAGATAGATATAGAGATGTATCTAAAATTTT
JMSF046K24+ GATCAAGTAATAAACAATGAATAGTACAAAAGATAGATATAGAGATGTATCTAAAATTTT
                      ____________________________________________________________
consensus GATCAAGTAATAAACAATGAATAGTACAAAAGATAGATATAGAGATGTATCTAAAATTTT
 
. : . : . : . : . : . :
JMSF052A08+ TTTAGTGGAGATTGGAGTTCCAGATCTAAAATTTAGAACGAACCGGAAGAGCTAATCTAG
JMFF012C22+ TTTAGTGGAGATTGGAGTTCCAGATCTAAAATTTAGAACGAACCGGAAGAGCTAATCTAG
JMSF040E03+ TTTAGTGGAGATTGGAGTTCCAGATCTAAAATTTAGAACGAACCGGAAGAGCTAATCTAG
JMFS038A11+ TTTAGTGGAGATTGGAGTTCCAGATCTAAAATTTAGAACGAACCGGAAGAGCTAATCTAG
JMFS118C07+ TTTAGTGGAGATTGGAGTTCCAGATCTAAAATTTAGAACGAACCGGAAGAGCTAATCTAG
JMFS068G07+ TTTAGTGGAGATTGGAGTTCCAGATCTAAAATTTAGAACGAACCGGAAGAGCTAATCTAG
JMSF005L03+ TTTAGTGGAGATTGGAGTTCCAGATCTAAAATTTAGAACGAACCGGAAGAGCTAATCTAG
JMSF046K24+ TTTAGTGGAGATTGGAGTTCCAGATCTAAAATTTAGAACGAACCGGAAGAGCTAATCTAG
                      ____________________________________________________________
consensus TTTAGTGGAGATTGGAGTTCCAGATCTAAAATTTAGAACGAACCGGAAGAGCTAATCTAG
 
. : . : . : . : . : . :
JMSF052A08+ GTAGCAGATGTGAGAATGGTGTGAGAGAATGCCAAGAGTTAATTTAGGTAGAGCTTGGC
JMFF012C22+ GTAGCAGATGAGAGAATGGTGTGAGAGAATGCCAAGAGTTAATTTAGGTAGAGCTT
JMSF040E03+ GTAGCAGATGTGAGAATGGTGTGAGAGAATGCCAAGAGTTAATTTAGGTAGAGCTTGGC
JMFS038A11+ GTAGCAGATGTGAGAATGGTGT-AGAGAATGCCAAGAGTTAATTTAGGTAGAGCTTGGCG
JMFS118C07+ GTAGCAGATGTGAGAATGGTGTGAGAGAATGCCAAGAGTTAATTTAGGTAGAGCTTGGCG
JMFS068G07+ GTAGCAGATGTGAGAATGGTGTGAGAGAATGCCAAGAGTTAATTTAGGTAGAGCTTGGCG
JMSF005L03+ GTAGCAGATGTGAGAATGGTGTGAGAGAATGCCAAGAGTTAATTTAGGTAGAGCTTGGCG
JMSF046K24+ GTAGCAGATGTGAGAATGGTGTGAGAGAATGCCAAGAGTTAATTTAGGTAGAGCTTGGCG
                      ____________________________________________________________
consensus GTAGCAGATGTGAGAATGGTGTGAGAGAATGCCAAGAGTTAATTTAGGTAGAGCTTGGCG
 
. : . : . : . : . : . :
JMFS038A11+ TGAG
JMFS118C07+ TGAGAGATTAGCTAGGAGGA
JMFS068G07+ TGAGAGATTAGCTAGGAGGAGAGATATTA
JMSF005L03+ TGAGAGATTAGCTAGGAGGAGAGATATTAGGAAATTGTGATGT
JMSF046K24+ TGAGAGATTAGCTAGGAGGAGAGATATTAGGAAATTGTGATGTGGAGAGTGTTGTCCGTC
                      ____________________________________________________________
consensus TGAGAGATTAGCTAGGAGGAGAGATATTAGGAAATTGTGATGTGGAGAGTGTTGTCCGTC