Contig 013536:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF012C22Sequence416013536 (8)701020160emb|CAN79779.1|5e-44hypothetical protein VITISV_013617 [Vitis vinifera]
JMFS038A11Sequence459013536 (8)
JMFS068G07Sequence486013536 (8)
JMFS118C07Sequence475013536 (8)
JMSF005L03Sequence360013536 (8)238018118
JMSF040E03Sequence467013536 (8)891002951 (2)ref|XP_006290549.1|1e-24hypothetical protein CARUB_v10016632mg [Capsella rubella] gb|EOA23447.1| hypothe
JMSF046K24Sequence515013536 (8)705011738 (9)ref|XP_010659215.1|1e-26PREDICTED: protein transport protein SEC31 homolog B isoform X1 [Vitis vinifera
JMSF052A08Sequence475013536 (8)734002951 (2)ref|XP_006290549.1|7e-25hypothetical protein CARUB_v10016632mg [Capsella rubella] gb|EOA23447.1| hypothe

Alignment

This contig is upended


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JMSF052A08+                ANNTTTTTGGGGGGGGGGGGGGGGGGGCGAAATCCCGCCCCAAACCGGTACGGCG
JMSF040E03+                        GGGGGGGGGGGGGGGGGGGCGAAATCCCGCCCCAAANCGGTACGGCG
JMFS038A11+                                                    CCGCCCAAACGGTACGGCG
JMFS118C07+                                                             CGGTACGGCG
JMFS068G07+                                                             CGGTACGGCG
JMSF046K24+                                                             CGGTACGGCG
                      ____________________________________________________________
consensus                  ANNTTTTTGGGGGGGGGGGGGGGGGGGCGAAATCCCGCCCCAAACCGGTACGGCG
 
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JMSF052A08+           TCGTTTGAGGCAAATGCAATGGGATTAAAATTTAGTAAATCGTGCTAGCCATCCTTTGTT
JMFF012C22+           TCGTTTGAGGCAAATGCAATGGGATTAAAATTTAGTAAATCGTGCTAGCCATCCTTTGTT
JMSF040E03+           TCGTTTGAGGCAAATGCAATGGGATTAAAATTTAGTAAATCGTGCTAGCCATCCTTTGTT
JMFS038A11+           TCGTTTGAGGCAAATGCAATGGGATTAAAATTTAGTAAATCGTGCTAGCCATCCTTTGTT
JMFS118C07+           TCGTTTGAGGCAAATGCAATGGGATTAAAATTTAGTAAATCGTGCTAGCCATCCTTTGTT
JMFS068G07+           TCGTTTGAGGCAAATGCAATGGGATTAAAATTTAGTAAATCGTGCTAGCCATCCTTTGTT
JMSF046K24+           TCGTTTGAGGCAAATGCAATGGGATTAAAATTTAGTAAATCGTGCTAGCCATCCTTTGTT
                      ____________________________________________________________
consensus             TCGTTTGAGGCAAATGCAATGGGATTAAAATTTAGTAAATCGTGCTAGCCATCCTTTGTT
 
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JMSF052A08+           CATAAATTGTTTACACAGCGCCACAGCCTTTTGAATTGCATCAGATCTGTAAGATAGATC
JMFF012C22+           CATAAATTGTTTACACAGCGCCACAGCCTTTTGAATTGCATCAGATCTGTAAGATAGATC
JMSF040E03+           CATAAATTGTTTACACAGCGCCACAGCCTTTTGAATTGCATCAGATCTGTAAGATAGATC
JMFS038A11+           CATAAATTGTTTACACAGCGCCACAGCCTTTTGAATTGCATCAGATCTGTAAGATAGATC
JMFS118C07+           CATAAATTGTTTACACAGCGCCACAGCCTTTTGAATTGCATCAGATCTGTAAGATAGATC
JMFS068G07+           CATAAATTGTTTACACAGCGCCACAGCCTTTTGAATTGCATCAGATCTGTAAGATAGATC
JMSF005L03+                                                       ATCTGTAAGATAGATC
JMSF046K24+           CATAAATTGTTTACACAGCGCCACAGCCTTTTGAATTGCATCAGATCTGTAAGATAGATC
                      ____________________________________________________________
consensus             CATAAATTGTTTACACAGCGCCACAGCCTTTTGAATTGCATCAGATCTGTAAGATAGATC
 
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JMSF052A08+           AAGAGTTGTCCATAGTCTTTATGCATGCTCCAGATCTATGAGTCCTATCAAAACCTATCG
JMFF012C22+           AAGAGTTGTCCATAGTCTTTATGCATGCTCCAGATCTATGAGTCCTATCAAAACCTATCG
JMSF040E03+           AAGAGTTGTCCATAGTCTTTATGCATGCTCCAGATCTATGAGTCCTATCAAAACCTATCG
JMFS038A11+           AAGAGTTGTCCATAGTCTTTATGCATGCTCCAGATCTATGAGTCCTATCAAAACCTATCG
JMFS118C07+           AAGAGTTGTCCATAGTCTTTATGCATGCTCCAGATCTATGAGTCCTATCAAAACCTATCG
JMFS068G07+           AAGAGTTGTCCATAGTCTTTATGCATGCTCCAGATCTATGAGTCCTATCAAAACCTATCG
JMSF005L03+           AAGAGTTGTCCATAGTCTTTATGCATGCTCCAGATCTATGAGTCCTATCAAAACCTATCG
JMSF046K24+           AAGAGTTGTCCATAGTCTTTATGCATGCTCCAGATCTATGAGTCCTATCAAAACCTATCG
                      ____________________________________________________________
consensus             AAGAGTTGTCCATAGTCTTTATGCATGCTCCAGATCTATGAGTCCTATCAAAACCTATCG
 
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JMSF052A08+           CCATTTTCTCTTTCTGCAATTTAGCGCCTTTGGTACTCTATTTTTCAATCTGTGTTCTTC
JMFF012C22+           CCATTTTCTCTTTCTGCAATTTAGCGCCTTTGGTACTCTATTTTTCAATCTGTGTTCTTC
JMSF040E03+           CCATTTTCTCTTTCTGCAATTTAGCGCCTTTGGTACTCTATTTTTCAATCTGTGTTCTTC
JMFS038A11+           CCATTTTCTCTTTCTGCAATTTAGCGCCTTTGGTACTCTATTTTTCAATCTGTGTTCTTC
JMFS118C07+           CCATTTTCTCTTTCTGCAATTTAGCGCCTTTGGTACTCTATTTTTCAATCTGTGTTCTTC
JMFS068G07+           CCATTTTCTCTTTCTGCAATTTAGCGCCTTTGGTACTCTATTTTTCAATCTGTGTTCTTC
JMSF005L03+           CCATTTTCTCTTTCTGCAATTTAGCGCCTTTGGTACTCTATTTTTCAATCTGTGTTCTTC
JMSF046K24+           CCATTTTCTCTTTCTGCAATTTAGCGCCTTTGGTACTCTATTTTTCAATCTGTGTTCTTC
                      ____________________________________________________________
consensus             CCATTTTCTCTTTCTGCAATTTAGCGCCTTTGGTACTCTATTTTTCAATCTGTGTTCTTC
 
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JMSF052A08+           GATCAAGTAATAAACAATGAATAGTACAAAAGATAGATATAGAGATGTATCTAAAATTTT
JMFF012C22+           GATCAAGTAATAAACAATGAATAGTACAAAAGATAGATATAGAGATGTATCTAAAATTTT
JMSF040E03+           GATCAAGTAATAAACAATGAATAGTACAAAAGATAGATATAGAGATGTATCTAAAATTTT
JMFS038A11+           GATCAAGTAATAAACAATGAATAGTACAAAAGATAGATATAGAGATGTATCTAAAATTTT
JMFS118C07+           GATCAAGTAATAAACAATGAATAGTACAAAAGATAGATATAGAGATGTATCTAAAATTTT
JMFS068G07+           GATCAAGTAATAAACAATGAATAGTACAAAAGATAGATATAGAGATGTATCTAAAATTTT
JMSF005L03+           GATCAAGTAATAAACAATGAATAGTACAAAAGATAGATATAGAGATGTATCTAAAATTTT
JMSF046K24+           GATCAAGTAATAAACAATGAATAGTACAAAAGATAGATATAGAGATGTATCTAAAATTTT
                      ____________________________________________________________
consensus             GATCAAGTAATAAACAATGAATAGTACAAAAGATAGATATAGAGATGTATCTAAAATTTT
 
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JMSF052A08+           TTTAGTGGAGATTGGAGTTCCAGATCTAAAATTTAGAACGAACCGGAAGAGCTAATCTAG
JMFF012C22+           TTTAGTGGAGATTGGAGTTCCAGATCTAAAATTTAGAACGAACCGGAAGAGCTAATCTAG
JMSF040E03+           TTTAGTGGAGATTGGAGTTCCAGATCTAAAATTTAGAACGAACCGGAAGAGCTAATCTAG
JMFS038A11+           TTTAGTGGAGATTGGAGTTCCAGATCTAAAATTTAGAACGAACCGGAAGAGCTAATCTAG
JMFS118C07+           TTTAGTGGAGATTGGAGTTCCAGATCTAAAATTTAGAACGAACCGGAAGAGCTAATCTAG
JMFS068G07+           TTTAGTGGAGATTGGAGTTCCAGATCTAAAATTTAGAACGAACCGGAAGAGCTAATCTAG
JMSF005L03+           TTTAGTGGAGATTGGAGTTCCAGATCTAAAATTTAGAACGAACCGGAAGAGCTAATCTAG
JMSF046K24+           TTTAGTGGAGATTGGAGTTCCAGATCTAAAATTTAGAACGAACCGGAAGAGCTAATCTAG
                      ____________________________________________________________
consensus             TTTAGTGGAGATTGGAGTTCCAGATCTAAAATTTAGAACGAACCGGAAGAGCTAATCTAG
 
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JMSF052A08+           GTAGCAGATGTGAGAATGGTGTGAGAGAATGCCAAGAGTTAATTTAGGTAGAGCTTGGC 
JMFF012C22+           GTAGCAGATGAGAGAATGGTGTGAGAGAATGCCAAGAGTTAATTTAGGTAGAGCTT    
JMSF040E03+           GTAGCAGATGTGAGAATGGTGTGAGAGAATGCCAAGAGTTAATTTAGGTAGAGCTTGGC 
JMFS038A11+           GTAGCAGATGTGAGAATGGTGT-AGAGAATGCCAAGAGTTAATTTAGGTAGAGCTTGGCG
JMFS118C07+           GTAGCAGATGTGAGAATGGTGTGAGAGAATGCCAAGAGTTAATTTAGGTAGAGCTTGGCG
JMFS068G07+           GTAGCAGATGTGAGAATGGTGTGAGAGAATGCCAAGAGTTAATTTAGGTAGAGCTTGGCG
JMSF005L03+           GTAGCAGATGTGAGAATGGTGTGAGAGAATGCCAAGAGTTAATTTAGGTAGAGCTTGGCG
JMSF046K24+           GTAGCAGATGTGAGAATGGTGTGAGAGAATGCCAAGAGTTAATTTAGGTAGAGCTTGGCG
                      ____________________________________________________________
consensus             GTAGCAGATGTGAGAATGGTGTGAGAGAATGCCAAGAGTTAATTTAGGTAGAGCTTGGCG
 
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JMFS038A11+           TGAG                                                        
JMFS118C07+           TGAGAGATTAGCTAGGAGGA                                        
JMFS068G07+           TGAGAGATTAGCTAGGAGGAGAGATATTA                               
JMSF005L03+           TGAGAGATTAGCTAGGAGGAGAGATATTAGGAAATTGTGATGT                 
JMSF046K24+           TGAGAGATTAGCTAGGAGGAGAGATATTAGGAAATTGTGATGTGGAGAGTGTTGTCCGTC
                      ____________________________________________________________
consensus             TGAGAGATTAGCTAGGAGGAGAGATATTAGGAAATTGTGATGTGGAGAGTGTTGTCCGTC