Contig 013531:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF045P21-                        GAAGTTTTATAAAGGTAAGGGCGGTTCTATGGTTTCTTACGTGAGC
rJMSF021E05-                                     GGTAAGGGCGGTTCTATGGTTTCTTACNTGAGC
                      ____________________________________________________________
consensus                           GAAGTTTTATAAAGGTAAGGGCGGTTCTATGGTTTCTTACGTGAGC
 
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rJMSF045P21-          CGCGACTTTGGGCCAATGAAAAGCTGCCACGTCACCCTCGAGGTCGGTTCTCCACCATGG
rJMSF021E05-          CGCGACTTTGGGCCAATGAAAAGCTGCNACGTCACCCTCGAGGTCGGTTCTCCACCATGG
                      ____________________________________________________________
consensus             CGCGACTTTGGGCCAATGAAAAGCTGCCACGTCACCCTCGAGGTCGGTTCTCCACCATGG
 
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rJMSF045P21-          TGTCACATCTGAATCCATCGTGCCAGCTGCATTGGATTGACTACACCGGGGATGTGGGCC
rJMSF021E05-          TGTCACATCTGAATCCATCGTGCCAGCTGCATTGGATTGACTACACCGGGGATGTGGGCC
                      ____________________________________________________________
consensus             TGTCACATCTGAATCCATCGTGCCAGCTGCATTGGATTGACTACACCGGGGATGTGGGCC
 
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rJMSF045P21-          CCGTCGTTCTTCAGTAGGGTCGCCACTTCAATGTAAGCTTGGCTCGGCTCGGGTTCCTGG
rJMSF021E05-          CCGTCGTTCTTCAGTAGGGTCGCCACTTCAATGTAAGCTTGGCTCGGCTCGGGTTCCTGG
                      ____________________________________________________________
consensus             CCGTCGTTCTTCAGTAGGGTCGCCACTTCAATGTAAGCTTGGCTCGGCTCGGGTTCCTGG
 
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rJMSF045P21-          CTCGTCGGGCCCTGACCCGGCTTACTGCCCCGTTTCAACTCGGAGGAGAGGTTATTGTTG
rJMSF021E05-          CTCGTCGGGCCCTGACCCGGCTTACTGCCCCGTTTCAACTCGGAGGAGAGGTTATTGTTG
                      ____________________________________________________________
consensus             CTCGTCGGGCCCTGACCCGGCTTACTGCCCCGTTTCAACTCGGAGGAGAGGTTATTGTTG
 
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rJMSF045P21-          TTGTTCACTGGGACGGCCTCGGCTCGAGCCGGGTCGAACTTCTGCCCGAACAGAGTTCCG
rJMSF021E05-          TTGTTCACTGGGACGGCCTCGGCTCGAGCCGGGTCGAACTTCTGCCCGAACAGAGTTCCG
                      ____________________________________________________________
consensus             TTGTTCACTGGGACGGCCTCGGCTCGAGCCGGGTCGAACTTCTGCCCGAACAGAGTTCCG
 
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rJMSF045P21-          CTAGTTAAGAACTCATAAGCCATGTACCCGGCTAGGAGCCGGTTAGACGAGGCCGGCTCG
rJMSF021E05-          CTAGTTAAGAACTCATAAGCCATGTACCCGGCTAGGAGCCGGTTAGACGAGGCCGGCTCG
                      ____________________________________________________________
consensus             CTAGTTAAGAACTCATAAGCCATGTACCCGGCTAGGAGCCGGTTAGACGAGGCCGGCTCG
 
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rJMSF045P21-          GCTTGCTTCGACGACGTCGTTGCCTTTTGACTGGGACTGCTAACGGCCGTCACTGGACTT
rJMSF021E05-          GCTTGCTTCGACGACGTCGTTGCCTTTTGACTGGGACTGCTAACGGCCGTCACTGGACTT
                      ____________________________________________________________
consensus             GCTTGCTTCGACGACGTCGTTGCCTTTTGACTGGGACTGCTAACGGCCGTCACTGGACTT
 
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rJMSF045P21-          GACGGCCACGTCGGATAAGACGCCGTTTCCCTCTCTTTCCGTTTCCTCGACGCCCCCCCA
rJMSF021E05-          GACGGCCACGTCGGATAAGACGCCGTTTCCCTCTCTTTCCGTTTCCTCGACGCCCCCCCA
                      ____________________________________________________________
consensus             GACGGCCACGTCGGATAAGACGCCGTTTCCCTCTCTTTCCGTTTCCTCGACGCCCCCCCA
 
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rJMSF045P21-          GGTGGCAAGAATCGCCGCGCGTGATAACTCATCTCCACCGTCCGTTTCCACTAATCTAAT
rJMSF021E05-          GGTGGCAAGAATCGCCGCGCGTGATAACTCATCTCCACCGTCCGTTTCCACTAATCTAAT
                      ____________________________________________________________
consensus             GGTGGCAAGAATCGCCGCGCGTGATAACTCATCTCCACCGTCCGTTTCCACTAATCTAAT
 
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rJMSF045P21-          CTTACTCGATCAATCCCAGGCTCGCCACGTCAGCAGCGAGAAATTTT             
rJMSF021E05-          CTTACTCGATCAATCCCAGGCTCGCCACGTCAGCAGCGAGAATTTTTAATTAACCCCTAA
JMSF045P21+            TTACTCGATCAATCCCNGGCTCGCCNCGTCAGCAGCGAGAATTTTTAATTNACCCCTNA
                      ____________________________________________________________
consensus             CTTACTCGATCAATCCCAGGCTCGCCACGTCAGCAGCGAGAATTTTTAATTAACCCCTAA
 
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rJMSF021E05-          AAACCGAAAAAAAAAGATTATTCGACGCAAGGGCAAAACCGTCCAGCCACACAAACTAGC
JMSF045P21+           AAACCGAAAAAAAAAGATTTTTNGACGCAAGGGCAAAACCGTCCAGCCNCNCNAACTAGC
                      ____________________________________________________________
consensus             AAACCGAAAAAAAAAGATTTTTCGACGCAAGGGCAAAACCGTCCAGCCACACAAACTAGC
 
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rJMSF021E05-          CAGGAGAGAAAACGGCCGAAACGGTAAAAAGG                            
JMSF021E05+                  GAAAACNGCCGAAACNGTNAAAAGGGTGGAAGGGAAAGTGGGGTCNCNAAATT
JMSF045P21+           CNGGAGAGAAAACGGCCGAAACGGTAAAAAGGGTGGAAGGGAAAGTGGGGTCGCAAAATT
                      ____________________________________________________________
consensus             CAGGAGAGAAAACGGCCGAAACGGTAAAAAGGGTGGAAGGGAAAGTGGGGTCGCAAAATT
 
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JMSF021E05+           TTGCNGTTNGGTTGGAAANGTAAATTCCCTTNGAACTNAAAATNATNACCCNAAAACCTT
JMSF045P21+           TTGCAGTTAGGTTGGAAATGTAAATTCNCTTCGAACTAAAAATAATAACCCNAAAACC--
                      ____________________________________________________________
consensus             TTGCAGTTAGGTTGGAAATGTAAATTCCCTTCGAACTAAAAATAATAACCCNAAAACCTT
 
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JMSF021E05+           TTTTTTTTCCNCNGGAAAAAAAAAGAAAAAGAAAAAGAAAAACAAAATCGTTATAATTTT
JMSF045P21+           TTTTTTTTCCNCNGGAAAAAAAAAGAAAAAGAAAAAGAAAAACAAAATCGTTATAATTTT
                      ____________________________________________________________
consensus             TTTTTTTTCCNCNGGAAAAAAAAAGAAAAAGAAAAAGAAAAACAAAATCGTTATAATTTT
 
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JMSF021E05+           TTTTTTAATGAGAGCAGAAGAGAGAGAGATATGGACGGATTTTGGAGTTGGATACTTGGA
JMSF045P21+           TTTTTTAATGAGAGCAGAAGAGAGAGAGATATGGACGGATTTTGGAGTTGGATACTTGGA
                      ____________________________________________________________
consensus             TTTTTTAATGAGAGCAGAAGAGAGAGAGATATGGACGGATTTTGGAGTTGGATACTTGGA
 
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JMSF021E05+           AGAGGTGAAAGGAGATCCGGAAGGGCCGCCGGAATCGGGCGGATCTCGGCGAGCGTACGG
JMSF045P21+           AGAGGTGAAAGGAGATCCGGAAGGGCCGCCGGAATCGGGCGGATCTCGGCGAGCGTACGG
                      ____________________________________________________________
consensus             AGAGGTGAAAGGAGATCCGGAAGGGCCGCCGGAATCGGGCGGATCTCGGCGAGCGTACGG
 
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JMSF021E05+           TGGTCTCGGTGGCGTCTCCGCCGTGTGCGGCGGCGAAATCAGATAGGAAGTTCAAATCAG
JMSF045P21+           TGGTCTCGGTGGCGTCTCCGCCGTGTGCGGCGGCGAAATCAGATAGGAAGTTCAAATCAG
                      ____________________________________________________________
consensus             TGGTCTCGGTGGCGTCTCCGCCGTGTGCGGCGGCGAAATCAGATAGGAAGTTCAAATCAG
 
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JMSF021E05+           GAAGAGAAAGAGAGAATAGAGAATAGAGAATAGAGAGAAGAGAGAAGGGAGAGGGTT   
JMSF045P21+           GAAGAGAAAGAGAGAATAGAGAATAGAGAATAGAGAGAAGAGAGAAGGGAGAGGGTTACC
                      ____________________________________________________________
consensus             GAAGAGAAAGAGAGAATAGAGAATAGAGAATAGAGAGAAGAGAGAAGGGAGAGGGTTACC