Contig 013530:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF016B09Sequence240013530 (2)778020348ref|XP_009786298.1|1e-66PREDICTED: uncharacterized aarF domain-containing protein kinase At1g71810, chl
JMSF045L09Sequence814013530 (2)ref|XP_006359010.1|3e-111PREDICTED: uncharacterized aarF domain-containing protein kinase At1g71810, chl755002068 (7)ref|XP_006344499.1|310PREDICTED: uncharacterized protein LOC102592878 [Solanum tuberosum]

Alignment

This contig is upended


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JMSF045L09+                                     AGGCCTGCTAGAAACCTTAAAATCAATATATCCA
                      ____________________________________________________________
consensus                                       AGGCCTGCTAGAAACCTTAAAATCAATATATCCA
 
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JMSF045L09+           AGGAGATTGCAGCTTGAACTCCTGGCCTTTGCACTTTGACAGCAACTATTTGTCCACTAC
                      ____________________________________________________________
consensus             AGGAGATTGCAGCTTGAACTCCTGGCCTTTGCACTTTGACAGCAACTATTTGTCCACTAC
 
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JMSF045L09+           GTTGAAGCCTAGCTTGGTAGACCTGTCCAAGTGATGCTGCTGCAACAGGCTCAGGTGAAA
                      ____________________________________________________________
consensus             GTTGAAGCCTAGCTTGGTAGACCTGTCCAAGTGATGCTGCTGCAACAGGCTCAGGTGAAA
 
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JMSF045L09+           CCTCTGAAAATAGTACATCTAAGGGCAACCCAAGTTCTTGCTCTATAGTACCAAAAGCAA
                      ____________________________________________________________
consensus             CCTCTGAAAATAGTACATCTAAGGGCAACCCAAGTTCTTGCTCTATAGTACCAAAAGCAA
 
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JMSF045L09+           CTTCATTGGGAAATGGAGTTATTTGGTCTTGCAACAATGAGAGCTCATCCAAATATGAAG
                      ____________________________________________________________
consensus             CTTCATTGGGAAATGGAGTTATTTGGTCTTGCAACAATGAGAGCTCATCCAAATATGAAG
 
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JMSF045L09+           GAGGAATCAAATCAGCCCGAGATGAGACAGCCTGTGCAATTTTAACATATGCCGGGCCAA
                      ____________________________________________________________
consensus             GAGGAATCAAATCAGCCCGAGATGAGACAGCCTGTGCAATTTTAACATATGCCGGGCCAA
 
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JMSF045L09+           GCTGTACCAATATCTTCCTCAGTTGCTCAGCTCTAATCTTGAACATGTCGTCTGCTCGTT
                      ____________________________________________________________
consensus             GCTGTACCAATATCTTCCTCAGTTGCTCAGCTCTAATCTTGAACATGTCGTCTGCTCGTT
 
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JMSF045L09+           CGCTAACGGTGTCAATGTATCTGAGGGCGAACCACTTGCCGAGAGTGGAGCCTATTTGGA
                      ____________________________________________________________
consensus             CGCTAACGGTGTCAATGTATCTGAGGGCGAACCACTTGCCGAGAGTGGAGCCTATTTGGA
 
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JMSF045L09+           AGAGGCGTCGCAGCACAAGGAGCGGCTTCTTCTGATAGATTGCGGCTATTTTCGCGATGT
                      ____________________________________________________________
consensus             AGAGGCGTCGCAGCACAAGGAGCGGCTTCTTCTGATAGATTGCGGCTATTTTCGCGATGT
 
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JMSF016B09+                                                            ACCCGAGTACT
JMSF045L09+           TGTACTCTGCAAGTGTTTCCTCCTCGGCAGGACTAAGCTCGAAAACATAACCCGAGTACT
                      ____________________________________________________________
consensus             TGTACTCTGCAAGTGTTTCCTCCTCGGCAGGACTAAGCTCGAAAACATAACCCGAGTACT
 
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JMSF016B09+           TGGTAAAGTCATCCTCCACACGTACAGCCGCCGGCAGCTGAGGTGCTAGTCGGCGGGAAT
JMSF045L09+           TGGTAAAGTCATCCTCCACACGTACAGCCGCCGGCAGCTGAGGTGCTAGTCGGCGGGAAT
                      ____________________________________________________________
consensus             TGGTAAAGTCATCCTCCACACGTACAGCCGCCGGCAGCTGAGGTGCTAGTCGGCGGGAAT
 
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JMSF016B09+           TGGAGGAGCTGAAACTGGCCCGTTTCGGCAAGAAAAAACGGCGGGAGGAATAGCCGGAAA
JMSF045L09+           TGGAGGAGCTGAAACTGGCCCGTTTCGGCAAGAAAAAACGGCGGGAGGAATAGCCGGAAA
                      ____________________________________________________________
consensus             TGGAGGAGCTGAAACTGGCCCGTTTCGGCAAGAAAAAACGGCGGGAGGAATAGCCGGAAA
 
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JMSF016B09+           AAGACGAGGTGGAGAACAGCGGCGGAGATGGTGGCGGGACCCCTAGCGTTTTCATTTCGT
JMSF045L09+           AAGACGAGGTGGAGAACAGCGGCGGAGATGGTGGCGGGACCCCTAGCGTTTTCATTTCGT
                      ____________________________________________________________
consensus             AAGACGAGGTGGAGAACAGCGGCGGAGATGGTGGCGGGACCCCTAGCGTTTTCATTTCGT
 
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JMSF016B09+           TTCTGTGGCGGAGGGGCGCGGAATTGTCAGGTATAACGGTAGAA                
JMSF045L09+           TTCTGTGGCGGAGGGGCGCGGAATTGTCAGGTATAACGGTAGAAGGACAGTGTTTGGATC
                      ____________________________________________________________
consensus             TTCTGTGGCGGAGGGGCGCGGAATTGTCAGGTATAACGGTAGAAGGACAGTGTTTGGATC