| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS013F05 | Sequence | 609 | 013528 (5) | emb|CDP13355.1| | 3e-61 | unnamed protein product [Coffea canephora] | |||||
| JMFS084G10 | Sequence | 598 | 013528 (5) | emb|CDP13355.1| | 5e-69 | unnamed protein product [Coffea canephora] | |||||
| JMFS112D12 | Sequence | 609 | 013528 (5) | ref|XP_009592004.1| | 6e-44 | PREDICTED: calmodulin-binding transcription activator 4-like isoform X3 [Nicoti | |||||
| JMSF040L03 | Sequence | 626 | 013528 (5) | emb|CDP13355.1| | 2e-72 | unnamed protein product [Coffea canephora] | 856 | 001471 (2) | ref|XP_006352173.1| | 2e-69 | PREDICTED: calmodulin-binding transcription activator 4-like isoform X2 [Solanu |
| JMSF045G19 | Sequence | 743 | 013528 (5) | emb|CDP13355.1| | 8e-68 | unnamed protein product [Coffea canephora] | 619 | 001471 (2) | ref|XP_009617256.1| | 1e-21 | PREDICTED: calmodulin-binding transcription activator 4 [Nicotiana tomentosifor |
This contig is upended
. : . : . : . : . : . :
JMFS112D12+ CAGAACTCCCATATCCATCGTCCATGTTCCAT
____________________________________________________________
consensus CAGAACTCCCATATCCATCGTCCATGTTCCAT
. : . : . : . : . : . :
JMFS112D12+ AAATTAACTTCGTGCCCCAGAAGTTGATCACGGTACTCAGTTAGGTCACCTGAACGTCGC
____________________________________________________________
consensus AAATTAACTTCGTGCCCCAGAAGTTGATCACGGTACTCAGTTAGGTCACCTGAACGTCGC
. : . : . : . : . : . :
JMFS112D12+ TGCAACAGATCACAGTTTGAATCTTCTGGAATCTGATTAATTGAGTTATGAAGATCATCT
____________________________________________________________
consensus TGCAACAGATCACAGTTTGAATCTTCTGGAATCTGATTAATTGAGTTATGAAGATCATCT
. : . : . : . : . : . :
JMFS112D12+ CGGATATTGTCAACATGAGCTGAGTTCTCTATGGTGTTGTACAGTGGCACAATGCCATCA
JMFS084G10+ ATGGTGTTGTACAGTGGCACAATGCCATCA
____________________________________________________________
consensus CGGATATTGTCAACATGAGCTGAGTTCTCTATGGTGTTGTACAGTGGCACAATGCCATCA
. : . : . : . : . : . :
JMFS112D12+ TTCATGTATAACTCCTCCTCAATCCTTTTCAATACTTCACTTATTTCATGCGCAGATGGG
JMFS084G10+ TTCATGTATAACTCCTCCTCAATCCTTTTCAATACTTCACTTATTTCATGCGCAGATGGG
____________________________________________________________
consensus TTCATGTATAACTCCTCCTCAATCCTTTTCAATACTTCACTTATTTCATGCGCAGATGGG
. : . : . : . : . : . :
JMFS112D12+ CTACTATCCTCCTCTACTGTGCCACTTGAATGATTTGTCCCGTTACTGTTAGTGACAGGA
JMFS084G10+ CTACTATCCTCCTCTACTGTGCCACTTGAATGATTTGTCCCGTTACTGTTAGTGACAGGA
____________________________________________________________
consensus CTACTATCCTCCTCTACTGTGCCACTTGAATGATTTGTCCCGTTACTGTTAGTGACAGGA
. : . : . : . : . : . :
JMFS112D12+ AAAGAACTAATCTCCATAGATCCAGGACTAGAGTATGCTTCAAAAATTCCACCATTGGCT
JMFS084G10+ AAAGAACTAATCTCCATAGATCCAGGACTAGAGTATGCTTCAAAAATTCCACCATTGGCT
____________________________________________________________
consensus AAAGAACTAATCTCCATAGATCCAGGACTAGAGTATGCTTCAAAAATTCCACCATTGGCT
. : . : . : . : . : . :
JMFS112D12+ GCCGTATAGCTTGTATACTGAACAGGATATGGGCTGGGATTCTGATTGATGGTAGAAGAC
JMFS084G10+ GCCGTATAGCTTGTATACTGAACAGGATATGGGCTGGGATTCTGATTGATGGTAGAAGAC
____________________________________________________________
consensus GCCGTATAGCTTGTATACTGAACAGGATATGGGCTGGGATTCTGATTGATGGTAGAAGAC
. : . : . : . : . : . :
JMFS112D12+ ACTGGAGAAAGCTGCGGCACGGATAGGGTCTTCTGTCCTCCCTGACATATATCTCTATAG
JMFS084G10+ ACTGGAGAAAGCTGCGGCACGGATAGGGTCTTCTGTCCTCCCTGACATATATCTCTATAG
JMSF040L03+ TATATCTCTATAG
JMSF045G19+ CTCCCTGACATATATCTCTATAG
____________________________________________________________
consensus ACTGGAGAAAGCTGCGGCACGGATAGGGTCTTCTGTCCTCCCTGACATATATCTCTATAG
. : . : . : . : . : . :
JMFS112D12+ TGAACAAAAACAATGTGCTCATATGCCGGATCCAACATCCAATAGCTGCGCCTTTGAAAT
JMFS084G10+ TGAACAAAAACAATGTGCTCATATGCCGGATCCAACATCCAATAGCTGCGCCTTTGAAAT
JMFS013F05+ CATATGCCGGATCCAACATCCAATAGCTGCGCCTTTGAAAT
JMSF040L03+ TGAACAAAAACAATGTGCTCATATGCCGGATCCAACATCCAATAGCTGCGCCTTTGAAAT
JMSF045G19+ TGAACAAAAACAATGTGCTCATATGCCGGATCCAACATCCAATAGCTGCGCCTTTGAAAT
____________________________________________________________
consensus TGAACAAAAACAATGTGCTCATATGCCGGATCCAACATCCAATAGCTGCGCCTTTGAAAT
. : . : . : . : . : . :
JMFS112D12+ TTAGGATTCTGCTCTCCATGTGCATAATAACAATTGA
JMFS084G10+ TTAGGATTCTGCTCTCCATGTGCATAATAACAATTGAGAGCTTCAACATTTCCTACCTTA
JMFS013F05+ TTAGGATTCTGCTCTCCATGTGCATAATAACAATTGAGAGCTTCAACATTTCCTACCTTA
JMSF040L03+ TTAGGATTCTGCTCTCCATGTGCATAATAACAATTGAGAGCTTCAACATTTCCTACCTTA
JMSF045G19+ TTAGGATTCTGCTCTCCATGTGCATAATAACAATTGAGAGCTTCAACATTTCCTACCTTA
____________________________________________________________
consensus TTAGGATTCTGCTCTCCATGTGCATAATAACAATTGAGAGCTTCAACATTTCCTACCTTA
. : . : . : . : . : . :
JMFS084G10+ AGCCTTTCATGTGCTTCTCCCCCAGCTCTCCCATCTTTCTTCCTCCGCCACCTATGACCA
JMFS013F05+ AGCCTTTCATGTGCTTCTCCCCCAGCTCTCCCATCTTTCTTCCTCCGCCACCTATGACCA
JMSF040L03+ AGCCTTTCATGTGCTTCTCCCCCAGCTCTCCCATCTTTCTTCCTCCGCCACCTATGACCA
JMSF045G19+ AGCCTTTCATGTGCTTCTCCCCCAGCTCTCCCATCTTTCTTCCTCCGCCACCTATGACCA
____________________________________________________________
consensus AGCCTTTCATGTGCTTCTCCCCCAGCTCTCCCATCTTTCTTCCTCCGCCACCTATGACCA
. : . : . : . : . : . :
JMFS084G10+ TCTTTACGGAAAAACCTTAATACTCTCTTGTTGAAGAGAAACAAAGAGCCACTTGGAGGC
JMFS013F05+ TCTTTACGGAAAAACCTTAATACTCTCTTGTTGAAGAGAAACAAAGAGCCACTTGGAGGC
JMSF040L03+ TCTTTACGGAAAAACCTTAATACTCTCTTGTTGAAGAGAAACAAAGAGCCACTTGGAGGC
JMSF045G19+ TCTTTACGGAAAAACCTTAATACTCTCTTGTTGAAGAGAAACAAAGAGCCACTTGGAGGC
____________________________________________________________
consensus TCTTTACGGAAAAACCTTAATACTCTCTTGTTGAAGAGAAACAAAGAGCCACTTGGAGGC
. : . : . : . : . : . :
JMFS084G10+ TTTTCAGGGGGCACATGGGTGATCTGGA
JMFS013F05+ TTTTCAGGGGGCACATGGGTGATCTGGAGGTTCTCATGATTCTGTAATATGGAGAGCACT
JMSF040L03+ TTTTCAGGGGGCACATGGGTGATCTGGAGGTTCTCATGATTCTGTAATATGGAGAGCACT
JMSF045G19+ TTTTCAGGGGGCACATGGGTGATCTGGAGGTTCTCATGATTCTGTAATATGGAGAGCACT
____________________________________________________________
consensus TTTTCAGGGGGCACATGGGTGATCTGGAGGTTCTCATGATTCTGTAATATGGAGAGCACT
. : . : . : . : . : . :
JMFS013F05+ TCAGCAGGTTTCAGCCACCTATTTTTAGCCTCGCGAACTAAATCATCATAATTAAATCCT
JMSF040L03+ TCAGCAGGTTT
JMSF045G19+ TCAGCAGGTTTCAGCCACCTATTTTTAGCCTCGCGAACTAAATCATCATAATTAAATCCT
____________________________________________________________
consensus TCAGCAGGTTTCAGCCACCTATTTTTAGCCTCGCGAACTAAATCATCATAATTAAATCCT
. : . : . : . : . : . :
JMFS013F05+ GATTCTGTCATCGCAAGCATATCAATCAAACGAAACCTCTCCGTTCTCGTTCATCCGAAT
JMSF045G19+ GATTCTGTCATCGCAAGCATATCAATCAAACGAAACCTCTCCGTTCTCGTTCATCCGAAT
____________________________________________________________
consensus GATTCTGTCATCGCAAGCATATCAATCAAACGAAACCTCTCCGTTCTCGTTCATCCGAAT
. : . : . : . : . : . :
JMFS013F05+ TGAGCCTCGATTCGACGCCGCCAACCACGAAACGGCGGTGTGATCCAGCGTGCACACAAG
JMSF045G19+ TGAGCCTCGATTCGACGCCGCCAACCACGAAACGGCGGTGTGATCCAGCGTGCACACAAG
____________________________________________________________
consensus TGAGCCTCGATTCGACGCCGCCAACCACGAAACGGCGGTGTGATCCAGCGTGCACACAAG
. : . : . : . : . : . :
JMFS013F05+ CTCCTCCACCGGAGCCGGAAAATTGAGCTCCGAACTTCAAAACTTCCACTCCGATAGGAA
JMSF045G19+ CTCCTCCACCGGAGCCGGAAAATTGAGCTCCGAACTTCAAAACTTCCACTCCGATAGGAA
____________________________________________________________
consensus CTCCTCCACCGGAGCCGGAAAATTGAGCTCCGAACTTCAAAACTTCCACTCCGATAGGAA
. : . : . : . : . : . :
JMFS013F05+ AACTAATTAGACACAGAATCATAAACACTGACACACGCACACATATATAGTGTACGAGAG
JMSF045G19+ AACTAATTAGACACAGAATCATAAACACTGACACACGCACACATATATAGTGTACGAGAG
____________________________________________________________
consensus AACTAATTAGACACAGAATCATAAACACTGACACACGCACACATATATAGTGTACGAGAG
. : . : . : . : . : . :
JMFS013F05+ CGAAAGAGTGATGAAGCAGAGGATTCTG
JMSF045G19+ CGAAAGAGTGATGAAGCAGAGGATTCTGGAGTCAGAGAGAATGGCGCGTCTGCGAGGTTT
____________________________________________________________
consensus CGAAAGAGTGATGAAGCAGAGGATTCTGGAGTCAGAGAGAATGGCGCGTCTGCGAGGTTT
. : . : . : . : . : . :
JMSF045G19+ GAAGTCGAAATATTGCTTCCGAGCCTGCAAAACATGCCGAAGGAAACACAGAGGAAGGCC
____________________________________________________________
consensus GAAGTCGAAATATTGCTTCCGAGCCTGCAAAACATGCCGAAGGAAACACAGAGGAAGGCC