| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF041N12 | Sequence | 649 | 013523 (12) | ref|XP_009621337.1| | 4e-105 | PREDICTED: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2-like [N | 354 | 013523 (12) | |||
| JMFS008G03 | Sequence | 634 | 013523 (12) | ref|XP_009621337.1| | 6e-98 | PREDICTED: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2-like [N | |||||
| JMSF005F19 | Sequence | 464 | 013523 (12) | ref|XP_009621337.1| | 4e-62 | PREDICTED: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2-like [N | 500 | 020283 | |||
| JMSF007P21 | Sequence | 227 | 013523 (12) | ref|XP_009621337.1| | 4e-19 | PREDICTED: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2-like [N | 710 | 013523 (12) | emb|CDO96958.1| | 5e-76 | unnamed protein product [Coffea canephora] |
| JMSF026O06 | Sequence | 656 | 005255 (2) | ref|XP_009621337.1| | 7e-09 | PREDICTED: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2-like [N | 734 | 013523 (12) | emb|CDO96958.1| | 1e-58 | unnamed protein product [Coffea canephora] |
| JMSF031K03 | Sequence | 658 | 013523 (12) | ref|XP_009621337.1| | 2e-103 | PREDICTED: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2-like [N | 700 | 013523 (12) | emb|CDO96958.1| | 2e-75 | unnamed protein product [Coffea canephora] |
| JMSF042F19 | Sequence | 778 | 005255 (2) | ref|XP_004230922.1| | 2e-10 | PREDICTED: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 [Solanu | 765 | 013523 (12) | emb|CDO96958.1| | 2e-58 | unnamed protein product [Coffea canephora] |
| JMSF043O05 | Sequence | 755 | 013523 (12) | ref|XP_009799362.1| | 1e-118 | PREDICTED: 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 [Nicoti | 683 | 013523 (12) | emb|CDO96958.1| | 1e-77 | unnamed protein product [Coffea canephora] |
This contig is upended
. : . : . : . : . : . :
rJMFF041N12- ACCCTGGAGAGXXXXXXXXXXXXX
____________________________________________________________
consensus ACCCTGGAGAGNNNNNNNNNNNNN
. : . : . : . : . : . :
rJMFF041N12- XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGAAACATAAACAATTGCATATAACAC
____________________________________________________________
consensus NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAAACATAAACAATTGCATATAACAC
. : . : . : . : . : . :
rJMFF041N12- TCCAAACTCTGAACCATGTCATACAAATACATAGTACATAATATATATTACT-GTAAACA
rJMSF026O06- GTCATACAAATACATAGTACATAATATATATTACT-GTAAACA
rJMSF042F19- GTCATACAAATACATAGTACATAATATATATTACT-GTAAACA
rJMSF031K03- AATACATAGTACATAATATATATTACTGGTAAACA
rJMSF007P21- GTCATACAAATACATAGTACATAATATATATTACTGGTAAACA
____________________________________________________________
consensus TCCAAACTCTGAACCATGTCATACAAATACATAGTACATAATATATATTACT-GTAAACA
. : . : . : . : . : . :
rJMFF041N12- AGTATGCAGCTAGATAGCTGGTTGCAAATTGACAAGGACTGGATGGAATGGATATTTATC
rJMSF026O06- AGTATGCAGCTAGATAGCTGGTTGCAGATTGACAAGGACTGGATGGAATGGATATTTATC
rJMSF042F19- AGTATGCAGCTAGATAGCTGGTTGCAGATTGACAAGGACTGGATGGAATGGATATTTATC
rJMSF031K03- AGTATGCAGCTAGATAGCTGGTTGCAGATTGACAAGGACTGGATGGAATGGATATTTATC
rJMSF007P21- AGTATGCAGCTAGATAGCTGGTTGCAGATTGACAAGGACTGGATGGAATGGATATTTATC
rJMSF043O05- AGTATGCAGCTAGATAGCTGGTTGCAGATTGACAAGGACTGGATGGAATGGATATTTATC
____________________________________________________________
consensus AGTATGCAGCTAGATAGCTGGTTGCAGATTGACAAGGACTGGATGGAATGGATATTTATC
. : . : . : . : . : . :
rJMFF041N12- AGGGGTATACATTGTTACGTGTACATAATATGGAGCCAGAATACAGTATCGCACACAAAT
rJMSF026O06- AGGTGTATACATTGTTACGTGTACATGATATGGAGCCAGAATACAGTATCGCACACAAAT
rJMSF042F19- AGGTGTATACATTGTTACGTGTACATGATATGGAGCCAGAATACAGTATCGCACACAAAT
rJMSF031K03- AGGTGTATACATTGTTACGTGTACATAATATGGAGCCAGAATACAGTATCGCACACAAAT
rJMSF007P21- AGGTGTATACATTGTTACGTGTACATAATATGGAGCCAGAATACAGTATCGCACACAAAT
rJMSF043O05- AGGTGTATACATTGTTACGTGTACATAATATGGAGCCAGAATACAGTATCGCACACAAAT
____________________________________________________________
consensus AGGTGTATACATTGTTACGTGTACATAATATGGAGCCAGAATACAGTATCGCACACAAAT
. : . : . : . : . : . :
rJMFF041N12- TTTATTGCCATTTTCCCAAAAGTTGAATGAACCCTTGATGGGTAATAAAAACGGAGTTCC
rJMSF026O06- TTTATTGCCATTTTCCCAGAAGTTGAATGAACGCTTGATGGGTAATAAGAACGGAGTTCC
rJMSF042F19- TTTATTGCCATTTTCCCAGAAGTTGAATGAACGCTTGATGGGTAATAAGAACGGAGTTCC
rJMSF031K03- TTTATTGCCATTTTCCCAGAAGTTGAATGAACGCTTGATGGGTAATAAGAACGGAGTTCC
rJMSF007P21- TTTATTGCCATTTTCCCAGAAGTTGAATGAACGCTTGATGGGTAATAAGAACGGAGTTCC
rJMSF043O05- TTTATTGCCATTTTCCCAGAAGTTGAATGAACGCTTGATGGGTAATAAGAACGGAGTTCC
____________________________________________________________
consensus TTTATTGCCATTTTCCCAGAAGTTGAATGAACGCTTGATGGGTAATAAGAACGGAGTTCC
. : . : . : . : . : . :
rJMFF041N12- ATAATTTGTAATCCAGTTGATTAATTTGATG
rJMSF026O06- ATAATTTGTAATCCAGTTGATTAATTTGATGCATCATGGTCCAAATCAAAGTTCAGATAG
rJMSF042F19- ATAATTTGTAATCCAGTTGATTAATTTGATGCATCATGGTCCAAATCAAAGTTCAGATAG
rJMSF031K03- ATAATTTGTAATCCAGTTGATTAATTTGATGCATCATGGTCCAAATCAAAGTTCAGATAG
rJMSF007P21- ATAATTTGTAATCCAGTTGATTAATTTGATGCATCATGGTCCAAATCAAAGTTCAGATAG
rJMSF043O05- ATAATTTGTAATCCAGTTGATTAATTTGATGCATCATGGTCCAAATCAAAGTTCAGATAG
____________________________________________________________
consensus ATAATTTGTAATCCAGTTGATTAATTTGATGCATCATGGTCCAAATCAAAGTTCAGATAG
. : . : . : . : . : . :
rJMSF026O06- AGATTTTCCGCTTATGAAATCAACAATTTGGGTGGCAGCTTCATCAAGTGCAGCAGCTAC
rJMSF042F19- AGATTTTCCGCTTATGAAATCAACAATTTGGGTGGCAGCTTCATCAAGTGCAGCAGCTAC
rJMSF031K03- AGATTTTCCGCTTATGAAATCAACAATTTGGGTGGCAGCTTCATCAAGTGCAGCAGCTAC
rJMSF007P21- AGATTTTCCGCTTATGAAATCAACAATTTGGGTGGCAGCTTCATCAAGTGCAGCAGCTAC
rJMSF043O05- AGATTTTCCGCTTATGAAATCAACAATTTGGGTGGCAGCTTCATCAAGTGCAGCAGCTAC
____________________________________________________________
consensus AGATTTTCCGCTTATGAAATCAACAATTTGGGTGGCAGCTTCATCAAGTGCAGCAGCTAC
. : . : . : . : . : . :
rJMSF026O06- AGCGGCTAAATTTTGCAAAAACTCCTCTGCTGTTGGTTTATCACCATCCACAATATCGGT
rJMSF042F19- AGCGGCTAAATTTTGCAAAAACTCCTCTGCTGTTGGTTTATCACCATCCACAATATCGGT
rJMSF031K03- AGCGGCTAAATTTTGCAAAAACTCCTCTGCTGTTGGTTTATCACCATCCACAATATCGGT
rJMSF007P21- AGCGGCTAAATTTTGCAAAAACTCCTCTGCTGTTGGTTTATCACCATCCACAATATCGGT
rJMSF043O05- AGCGGCTAAATTTTGCAAAAACTCCTCTGCTGTTGGTTTATCACCATCCACAATATCGGT
JMSF043O05+ TGCTGTTGGTTTATCACCATCCACAATATCGGT
____________________________________________________________
consensus AGCGGCTAAATTTTGCAAAAACTCCTCTGCTGTTGGTTTATCACCATCCACAATATCGGT
. : . : . : . : . : . :
rJMSF026O06- CACTGCTTTCAAAAAAATTGCAGGGACTTTCAAAAGATCTGACACATATGCAATTGCTGC
rJMSF042F19- CACTGCTTTCAAAAAAATTGCAGGGACTTTCAAAAGATCTGACACATATGCAATTGCTGC
rJMSF031K03- CACTGCTTTCAAAAAAATTGCAGGGACTTTCAAAAGATCTGACACATATGCAATTGCTGC
rJMSF007P21- CACTGCTTTCAAAAAAATTGCAGGGACTTTCAAAAGATCTGACACATATGCAATTGCTGC
rJMSF043O05- CACTGCTTTCAAAAAAATTGCAGGGACTTTCAAAAGATCTGACACATATGCAATTGCTGC
JMSF031K03+ TGACACATATGCAATTGCTGC
JMFF041N12+ AAAGATCTGACACATATGCAATTGCTGC
JMSF043O05+ CACTGCTTTCAAAAAAATTGCAGGGACTTTCAAAAGATCTGACACATATGCAATTGCTGC
____________________________________________________________
consensus CACTGCTTTCAAAAAAATTGCAGGGACTTTCAAAAGATCTGACACATATGCAATTGCTGC
. : . : . : . : . : . :
rJMSF026O06- TCCCTCCATGTCTTTAACTGTTGCATCATTAGCAGTGATAGATGATTCATCAACTGGGGA
rJMSF042F19- TCCCTCCATGTCTTTAACTGTTGCATCATTAGCAGTGATAGATGATTCATCAACTGGGGA
rJMSF031K03- TCCCTCCATGTCTTTAACTGTTGCATCATTAGCAGTGATAGATGATTCATCAACTGGGGA
rJMSF007P21- TCCCTCCATGTCTTTAACTGTTGCATCATTAGCAGTGATAGATGATTCATCAACTGGGGA
rJMSF043O05- TCCCTCCATGTCTTTAACTGTTGCATCATTAGCAGTGATAGATGATTCATCAACTGGGGA
JMSF031K03+ TCCCTCCATGTCTTTAACTGTTGCATCATTAGCAGTGATAGATGATTCATCAACTGGGGA
JMFF041N12+ TCCCTCCATGTCTTTAACTGTTGCATCATTAGCAGTGATAGATGATTCATCAACTGGGGA
JMFS008G03+ CATGTCTTTAACTGTGGCATCATTAGCAGTGATAGATGATTCATCAACTGGGGA
JMSF043O05+ TCCCTCCATGTCTTTAACTGTTGCATCATTAGCAGTGATAGATGATTCATCAACTGGGGA
____________________________________________________________
consensus TCCCTCCATGTCTTTAACTGTTGCATCATTAGCAGTGATAGATGATTCATCAACTGGGGA
. : . : . : . : . : . :
rJMSF026O06- CATATCCAAGGAATCACCAGTAGACAGTTTGCCAACCTTCAGATTAAGTTCCTTCAGGAG
rJMSF042F19- CATATCCAAGGAATCACCAGTAGACAGTTTGCCAACCTTCAGATTAAGTTCCTTCAGGAG
rJMSF031K03- CATATCCAAGGAATCACCAGTAGACAGTTTGCCAACCTTCAGATTAAGTTCCTTCAGGAG
rJMSF007P21- CATATCCAAGGAATCACCAGTAGACAGTTTGCCAACCTTCAGATTAAGTTCCTTCAGGAG
rJMSF043O05- CATATCCAAGGAATCACCAGTAGACAGTTTGCCAACCTTCAGATTAAGTTCCTTCAGGAG
JMSF031K03+ CATATCCAAGGAATCACCAGTAGACAGTTTGCCAACCTTCAGATTAAGTTCCTTCAGGAG
JMFF041N12+ CATATCCAAGGAATCACCAGTAGACAGTTTGCCAACCTTCAGATTAAGTTCCTTCAGGAG
JMFS008G03+ CATATCCAAGGAATCACCAGTAGACAGTTTGCCAACCTTCAGATTAAGTTCCTTCAGGAG
JMSF043O05+ CATATCCAAGGAATCACCAGTAGACAGTTTGCCAACCTTCAGATTAAGTTCCTTCAGGAG
____________________________________________________________
consensus CATATCCAAGGAATCACCAGTAGACAGTTTGCCAACCTTCAGATTAAGTTCCTTCAGGAG
. : . : . : . : . : . :
rJMSF026O06- ATTAGGAGTGGGAAAAGCCTGTCGCAAGCCAACTCCATACAAATCAAATAC
rJMSF042F19- ATTAGGAGTGGGAAAAGCCTGTCGCAAGCCAACTCCATACAAATCAAATAC
rJMSF031K03- ATTAGGAGTGGGAAAAGCCTGTCGCAAGCCAACTCCATACAAATCAAATACTGGGATAGG
rJMSF007P21- ATTAGGAGTGGGAAAAGCCTGTCGCAAGCCAACTCCATACAAATCAAATACTGGGATAGG
rJMSF043O05- ATTAGGAGTGGGAAAAGCCTGTCGCAAGCCAACTCCATACAAATCAAATACTGGGATAGG
JMSF005F19+ AATCAAATACTGGGATAGG
JMSF031K03+ ATTAGGAGTGGGAAAAGCCTGTCGCAAGCCAACTCCATACAAATCAAATACTGGGATAGG
JMFF041N12+ ATTAGGAGTGGGAAAAGCCTGTCGCAAGCCAACTCCATACAAATCAAATACTGGGATAGG
JMFS008G03+ ATTAGGAGTGGGAAAAGCCTGTCGCAAGCCAACTCCATACAAATCAAATACTGGGATAGG
JMSF043O05+ ATTAGGAGTGGGAAAAGCCTGTCGCAAGCCAACTCCATACAAATCAAATACTGGGATAGG
____________________________________________________________
consensus ATTAGGAGTGGGAAAAGCCTGTCGCAAGCCAACTCCATACAAATCAAATACTGGGATAGG
. : . : . : . : . : . :
rJMSF031K03- TATTCTTCTATCATGGAAAGCAGCATGTGATGCAATAAATACATCTCCNATGGAAGCACC
rJMSF007P21- TATTCTTCTATCATGGAAAGCAGCATGTGATGCAATAAATACATCTCCNATGGAAGCACC
rJMSF043O05- TATTCTTCTATCATGGAAAGCAGCATGTGATGCAATAAATACATCTCCNATGGAAGCACC
JMSF005F19+ TATTCTTNTATCATGGAAAGCAGCATGTGATGCAATAAATACATCTCCAATGGAAGCACC
JMSF031K03+ TATTCTTCTATCATGGAAAGCAGCATGTGATGCAATAAATACATCTCCAATGGAAGCACC
JMFF041N12+ TATTCTTCTATCATGGAAAGCAGCATGTGATGCAATAAATACATCTCCAATGGAAGCACC
JMFS008G03+ TATTCTTCTATCATGGAAAGCAGCATGTGATGCAATAAATACATCTCCAATGGAAGCACC
JMSF043O05+ TATTCTTCTATCATGGAAAGCAGCATGTGATGCAATAAATACATCTCCAATGGAAGCACC
____________________________________________________________
consensus TATTCTTCTATCATGGAAAGCAGCATGTGATGCAATAAATACATCTCCAATGGAAGCACC
. : . : . : . : . : . :
rJMSF031K03- TTTAG
rJMSF007P21- TTTAGCC
rJMSF043O05- TTTAGCCNTAAA
JMSF005F19+ TTTAGCCTTAAACCCACCCGCAGTGCCTGCATTTATGATGAGGTCAGGTTTTAATGCTTG
JMSF031K03+ TTTAGCCTTAAACCCACCCGCAGTGCCTGCATTTATGATGAGGTCAGGTTTTAATGCTTG
JMFF041N12+ TTTAGCCTTAAACCCACCCGCAGTGCCTGCATTTATGATGAGGTCAGGTTTTAATGCTTG
JMFS008G03+ TTTAGCCTTAAACCCACCCGCAGTGCCTGCATTTATGATGAGGTCAGGTTTTAATGCTTG
JMSF043O05+ TTTAGCCTTAAACCCACCCGCAGTGCCTGCATTTATGATGAGGTCAGGTTTTAATGCTTG
____________________________________________________________
consensus TTTAGCCTTAAACCCACCCGCAGTGCCTGCATTTATGATGAGGTCAGGTTTTAATGCTTG
. : . : . : . : . : . :
JMSF005F19+ GATAGAAGCATAAGTCAAAAGAGACGAAGAAATCGTCCCTACGCTGTCAACCCCCAAAAC
JMSF031K03+ GATAGAAGCATAAGTCAAAAGAGACGAAGAAATCGTCCCTACGCTGTCAACCCCCAAAAC
JMFF041N12+ GATAGAAGCATAAGTCAAAAGAGACGAAGAAATCGTCCCTACGCTGTCAACCCCCAAAAC
JMFS008G03+ GATAGAAGCATAAGTCAAAAGAGACGAAGAAATCGTCCCTACGCTGTCAACCCCCAAAAC
JMSF043O05+ GATAGAAGCATAAGTCAAAAGAGACGAAGAAATCGTCCCTACGCTGTCAACCCCCAAAAC
____________________________________________________________
consensus GATAGAAGCATAAGTCAAAAGAGACGAAGAAATCGTCCCTACGCTGTCAACCCCCAAAAC
. : . : . : . : . : . :
JMSF005F19+ TGCATCTTTTCCAGGACAGACAATATTCATTTCGAGATCCTTATAGTTGCCATAATACCG
JMSF031K03+ TGCATCTTTTCCAGGACAGACAATATTCATTTCGAGATCCTTATAGTTGCCATAATACCG
JMFF041N12+ TGCATCTTTTCCAGGACAGACAATATTCATTTCGAGATCCTTATAGTTGCCATAATACCG
JMFS008G03+ TGCATCTTTTCCAGGACAGACAATATTCATTTCGAGATCCTTATAGTTGCCATAATACCG
JMSF007P21+ ATAATACCG
JMSF043O05+ TGCATCTTTTCCAGGACAGAAAATATTCATTTCGAGATCCTTATAGTTGCCATAATACCG
____________________________________________________________
consensus TGCATCTTTTCCAGGACAGACAATATTCATTTCGAGATCCTTATAGTTGCCATAATACCG
. : . : . : . : . : . :
JMSF005F19+ CACCCAAGGAACTCCCTTTGGAAACGGCGGATCAACATCCTCGACGAGCTGGAACTTATT
JMSF031K03+ CACCCAAGGAACTCCCTTTGGAAACGGCGGATCAACATCCTCGACGAGCTGGAACTTATT
JMFF041N12+ CACCCAAGGAACTCCCTTTGGAAACGGCGGATCAACATCCTCGACGAGCTGGAACTTATT
JMFS008G03+ CACCCAAGGAACTCCCTTTGGAAACGGCGGATCAACATCCTCGACGAGCTGGAACTTATT
JMSF007P21+ CACCCAAGGAACTCCCTTTGGAAACGGCGGATCAACATCCTCGACGAGCTGGAACTTATT
JMSF043O05+ CACCCAAGGAACTCCCTTTGGAAACGGCGGATCAACATCCTCGACGAGCTGGAACTTATT
____________________________________________________________
consensus CACCCAAGGAACTCCCTTTGGAAACGGCGGATCAACATCCTCGACGAGCTGGAACTTATT
. : . : . : . : . : . :
JMSF005F19+ GCCGAGAGGTAGCGCCTCAGTTTGCATAGCGATGACGAAGACGATGGTGGAGACGGGGCG
JMSF031K03+ GCCGAGAGGTAGCGCCTCAGTTTGCATAGCGATGACGAAGACGATGGTGGAGACGGGGCG
JMFF041N12+ GCCGAGAGGTAGCGCCTCAGTTTGCATAGCGATGACGAAGACGATGGTGGAGACGGGGCG
JMFS008G03+ GCCGAGAGGTAGCGCCTCAGTTTGCATAGCGATGACGAAGACGATGGTGGAGACGGGGCG
JMSF007P21+ GCCGAGAGGTAGCGCCTCAGTTTGCATAGCGATGACGAAGACGATGGTGGAGACGGGGCG
JMSF043O05+ GCCGAGAGGTAGCGCCTCAGTTTGCATAGCGATGACGAAGACGATGGTGGAGACGGGGCG
____________________________________________________________
consensus GCCGAGAGGTAGCGCCTCAGTTTGCATAGCGATGACGAAGACGATGGTGGAGACGGGGCG
. : . : . : . : . : . :
JMSF005F19+ GTCATCGGCCGGAGAATGAGAAGAAGCGGCGACGGCTGACTCATCCTTGACTTGTTCCAA
JMSF031K03+ GTCATCGGCCGGAGAATGAGAAGAAGCGGCGACGGCTGACTCATCCTTGACTTGTTCCAA
JMFF041N12+ GTCATCGGCCGGAGAATGAGAAGAAGCGGCGACGGCTGACTCATCCTTGACTTGTTCCAA
JMFS008G03+ GTCATCGGCCGGAGAATGAGAAGAAGCGGCGACGGCTGACTCATCCTTGACTTGTTCCAA
JMSF007P21+ GTCATCGGCCGGAGAATGAGAAGAAGCGGCGACGGCTGACTCATCCTTGACTTGTTCCAA
JMSF043O05+ GTCATCGGCCGGAGAATGAGAAGAAGCGGCGACGGGTGACTCATCCTTGACTTGTTCCAA
____________________________________________________________
consensus GTCATCGGCCGGAGAATGAGAAGAAGCGGCGACGGCTGACTCATCCTTGACTTGTTCCAA
. : . : . : . : . : . :
JMSF005F19+ TTGGTCCTCCGGAGGAGCCATTCT
JMSF031K03+ TTGGTCCTCCGGAGGAGCCATTCTGATTTGCCTCACC
JMFF041N12+ TTGGTCCTCCGGAGGAGCCAT
JMFS008G03+ TTGGTCCTCCGGAGGAGCCATTCTGATTTGCCTCACCAGA
JMSF007P21+ TTGGTCCTCCGGAGGAGCCATTCTGATTTGCCTCACC
JMSF043O05+ TTGGTCCTCCGGAGGAGCCATTCTGATTTGCCTCACCAGATCTTCTCTTCTTCTTCTGTC
____________________________________________________________
consensus TTGGTCCTCCGGAGGAGCCATTCTGATTTGCCTCACCAGATCTTCTCTTCTTCTTCTGTC