Contig 013519:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMSF042F04Sequence735013519 (5)ref|XP_006357919.1|370PREDICTED: probable quinone oxidoreductase-like [Solanum tuberosum]716013519 (5)ref|XP_004240763.1|4e-131PREDICTED: probable quinone oxidoreductase [Solanum lycopersicum]
JMSF043F02Sequence773013519 (5)ref|XP_006357919.1|331PREDICTED: probable quinone oxidoreductase-like [Solanum tuberosum]
JMSF045P08Sequence775013519 (5)ref|XP_006357919.1|394PREDICTED: probable quinone oxidoreductase-like [Solanum tuberosum]755013519 (5)ref|XP_011028475.1|4e-127PREDICTED: probable quinone oxidoreductase isoform X2 [Populus euphratica]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF042F04- AGATTATACAAACAAGCATTATTGGCAATGACTTTCATACATCTAACACATGCA
rJMSF045P08- AGATTATACAAACAAGCATTATTGGCAATGACTTTCATACATCTAACACATGCA
                      ____________________________________________________________
consensus AGATTATACAAACAAGCATTATTGGCAATGACTTTCATACATCTAACACATGCA
 
. : . : . : . : . : . :
rJMSF042F04- GTACTGCACTGGGTAGTTAGTGCTTAATTGTCCAGAGTGAGCACAATGGATCCAGATGTT
rJMSF045P08- GTACTGCACTGGGTAGTTAGTGCTTAATTGTCCAGAGTGAGCACAATGGATCCAGATGTT
                      ____________________________________________________________
consensus GTACTGCACTGGGTAGTTAGTGCTTAATTGTCCAGAGTGAGCACAATGGATCCAGATGTT
 
. : . : . : . : . : . :
rJMSF042F04- TTTCTGCTCTCGAGGTCAGCGTGAGCTTGTGCTACTTGAGATAGCGGATAGGTATGATTC
rJMSF045P08- TTTCTGCTCTCGAGGTCAGCGTGAGCTTGTGCTACTTGAGATAGCGGATAGGTATGATTC
                      ____________________________________________________________
consensus TTTCTGCTCTCGAGGTCAGCGTGAGCTTGTGCTACTTGAGATAGCGGATAGGTATGATTC
 
. : . : . : . : . : . :
rJMSF042F04- ATGCGTACCCTTAGCACACCTGATGCAACATTGGCAAAAACCTCCCCAGCACATTCAAGT
rJMSF045P08- ATGCGTACCCTTAGCACACCTGATGCAACATTGGCAAAAACCTCCCCAGCACATTCAAGT
                      ____________________________________________________________
consensus ATGCGTACCCTTAGCACACCTGATGCAACATTGGCAAAAACCTCCCCAGCACATTCAAGT
 
. : . : . : . : . : . :
rJMSF042F04- AGTTCGTCGCGTGTGCTTGTGTAATCCATCATGGAAGGCCTAGTCAAGAACAGTGATTTT
rJMSF045P08- AGTTCGTCGCGTGTGCTTGTGTAATCCATCATGGAAGGCCTAGTCAAGAACAGTGATTTT
                      ____________________________________________________________
consensus AGTTCGTCGCGTGTGCTTGTGTAATCCATCATGGAAGGCCTAGTCAAGAACAGTGATTTT
 
. : . : . : . : . : . :
rJMSF042F04- GCTGCAAGAGTAGATAAATGCGCAGGATCGGGTGTTCCAGATGACTGTCCAAAACTCACC
rJMSF045P08- GCTGCAAGAGTAGATAAATGCGCAGGATCGGGTGTTCCAGATGACTGTCCAAAACTCACC
                      ____________________________________________________________
consensus GCTGCAAGAGTAGATAAATGCGCAGGATCGGGTGTTCCAGATGACTGTCCAAAACTCACC
 
. : . : . : . : . : . :
rJMSF042F04- ATGTAGCCCCGTGTTTTCAGACATTCTAATGATCCCTGAAAGGTGTCTTTCCCAACAGAA
rJMSF045P08- ATGTAGCCCCGTGTTTTCAGACATTCTAATGATCCCTGAAAGGTGTCTTTCCCAACAGAA
                      ____________________________________________________________
consensus ATGTAGCCCCGTGTTTTCAGACATTCTAATGATCCCTGAAAGGTGTCTTTCCCAACAGAA
 
. : . : . : . : . : . :
rJMSF042F04- TCATAAACAACTTCCACTCCTTTTCCAGATGTGATCTCATTCACACGGGAGACAAAATCC
rJMSF045P08- TCATAAACAACTTCCACTCCTTTTCCAGATGTGATCTCATTCACACGGGAGACAAAATCC
JMSF045P08+ CCAGATGTGATNTCATTCACACGGGAGACAAAATCC
                      ____________________________________________________________
consensus TCATAAACAACTTCCACTCCTTTTCCAGATGTGATCTCATTCACACGGGAGACAAAATCC
 
. : . : . : . : . : . :
rJMSF042F04- TCTTCCTTGTAGGATATGGTATGATGGCAACCATCTTCTTTAGCTTGGGCTGCCTTTTCT
rJMSF045P08- TCTTCCTTGTAGGATATGGTATGATGGCAACCATCTTCTTTAGCTTGGGCTGCCTTTTCT
JMSF042F04+ CCTTGTAGGATATGGTATGATGGCAACCATCTTCTTTAGCTTGGGCTGCCTTTTCT
JMSF045P08+ TCTTCCTTGTAGGATATGGTATGATGGCAACCATCTTCTTTAGCTTGGGCTGCCTTTTCT
JMSF043F02+ TGTAGGATATGGTATGATGGCAACCATCTTCTTTAGCTTGGGCTGCCTTTTCT
                      ____________________________________________________________
consensus TCTTCCTTGTAGGATATGGTATGATGGCAACCATCTTCTTTAGCTTGGGCTGCCTTTTCT
 
. : . : . : . : . : . :
rJMSF042F04- TTAGTTGAGACAGTT-CCAATGACAGTTGCACCAAGAGCATTTGCCCATTGACACAAAAG
rJMSF045P08- TTAGTTGAGACAGTT-CCAATGACAGTTGCACCAAGAGCATTTGCCCATTGACACAAAAG
JMSF042F04+ TTAGTTGAGACAGTT-CCAATGACAGTTGCACCAAGAGCATTTGCCCATTGACACAAAAG
JMSF045P08+ TTAGTTGAGACAGTT-CCAATGACAGTTGCACCAAGAGCATTTGCCCATTGACACAAAAG
JMSF043F02+ TTAGTTGAGACAGTTNCCAATGACAGTTGCACCAAGAGCATTTGCCCATTGACACAAAAG
                      ____________________________________________________________
consensus TTAGTTGAGACAGTT-CCAATGACAGTTGCACCAAGAGCATTTGCCCATTGACACAAAAG
 
. : . : . : . : . : . :
rJMSF042F04- GGAGCCAACTCCACCTGCTGCAGCATGAACAAGAACCGTGTGTCCAGGCTCAACCTTGAA
rJMSF045P08- GGAGCCAACTCCACCTGCTGCAGCATGAACAAGAACCGTGTGTCCAGGCTCAACCTTGAA
JMSF042F04+ GGAGCCAACTCCACCTGCTGCAGCATGAACAAGAACCGTGTGTCCAGGCTCAACCTTGAA
JMSF045P08+ GGAGCCAACTCCACCTGCTGCAGCATGAACAAGAACCGTGTGTCCAGGCTCAACCTTGAA
JMSF043F02+ GGAGCCAACTCCACCTGCTGCAGCATGAACAAGAACCGTGTGTCCAGGCTCAACCTTGAA
                      ____________________________________________________________
consensus GGAGCCAACTCCACCTGCTGCAGCATGAACAAGAACCGTGTGTCCAGGCTCAACCTTGAA
 
. : . : . : . : . : . :
rJMSF042F04- GCATCTGCGAAGTAAAAACTGAGTCGTCATTCCCTTCAAAAGTACAGATGCTACTGTAAT
rJMSF045P08- GCATCTGCGAAGTAAAAACTGAGTCGTCATTCCCTTC-AAAGTACAGATGCTACTGTAAT
JMSF042F04+ GCATCTGCGAAGTAAAAACTGAGTCGTCATTCCCTTCAAAAGTACAGATGCTACTGTAAT
JMSF045P08+ GCATCTGCGAAGTAAAAACTGAGTCGTCATTCCCTTCAAAAGTACAGATGCTACTGTAAT
JMSF043F02+ GCATCTGCGAAGTAAAAACTGAGTCGTCATTCCCTTCAAAAGTACAGATGCTACTGTAAT
                      ____________________________________________________________
consensus GCATCTGCGAAGTAAAAACTGAGTCGTCATTCCCTTCAAAAGTACAGATGCTACTGTAAT
 
. : . : . : . : . : . :
rJMSF042F04- AGG
rJMSF045P08- AGGGTCAATAGACGGAGGAACAGGCACCACTTTATCTGCAGGG
JMSF042F04+ AGGGTCAATAGACGGAGGAACAGGCACCACTTTATCTGCAGGGAGGATTTGTTCTTCAGC
JMSF045P08+ AGGGTCAATAGACGGAGGAACAGGCACCACTTTATCTGCAGGGAGGATTTGTTCTTCAGC
JMSF043F02+ AGGGTCAATAGACGGAGGAACAGGCACCACTTTATCTGCAGGGAGGATTTGTTCTTCAGC
                      ____________________________________________________________
consensus AGGGTCAATAGACGGAGGAACAGGCACCACTTTATCTGCAGGGAGGATTTGTTCTTCAGC
 
. : . : . : . : . : . :
JMSF042F04+ ATATGCTCCCATTGGGCGGCCAGCATAAGCAACAACATCCCCAACTTTTCTTCCTGTTAA
JMSF045P08+ ATATGCTCCCATTGGGCGGCCAGCATAAGCAACAACATCCCCAACTTTTCTTCCTGTTAA
JMSF043F02+ ATATGCTCCCATTGGGCGGCCAGCATAAGCAACAACATCCCCAACTTTTCTTCCTGTTAA
                      ____________________________________________________________
consensus ATATGCTCCCATTGGGCGGCCAGCATAAGCAACAACATCCCCAACTTTTCTTCCTGTTAA
 
. : . : . : . : . : . :
JMSF042F04+ TCCAGGACCAACGGCTATCACCACACCAACAGCCTCCATGCCTGGTGTAAAGGGCATGCT
JMSF045P08+ TCCAGGACCAACGGCTATCACCACACCAACAGCCTCCATGCCTGGTGTAAAGGGCATGCT
JMSF043F02+ TCCAGGACCAACGGCTATCACCACACCAACAGCCTCCATGCCTGGTGTAAAGGGCATGCT
                      ____________________________________________________________
consensus TCCAGGACCAACGGCTATCACCACACCAACAGCCTCCATGCCTGGTGTAAAGGGCATGCT
 
. : . : . : . : . : . :
JMSF042F04+ AGCAGCCTTATAAACCCCTTTGCGGAAATATATATCAATAAAGTTAACGCCAAGTGCCTG
JMSF045P08+ AGCAGCCTTATAAACCCCTTTGCGGAAATATATATCAATAAAGTTAACGCCAAGTGCCTG
JMSF043F02+ AGCAGCCTTATAAACCCCTTTGCGGAAATATATATCAATAAAGTTAACGCCAAGTGCCTG
                      ____________________________________________________________
consensus AGCAGCCTTATAAACCCCTTTGCGGAAATATATATCAATAAAGTTAACGCCAAGTGCCTG
 
. : . : . : . : . : . :
JMSF042F04+ ATTTTTCGCCTTGATCTCCCCTTCCTTTGGATCTCCTACTTCAACATCCTCCCACTTAAG
JMSF045P08+ ATTTTTCACCTTGATCTCCCCTTCCTTTGGATCTCCTACTTCAACATCCTCCCACTTAAG
JMSF043F02+ ATTTTTCACCTTGATCTCCCCTTCCTTTGGATCTCCTACTTCAACATCCTCCCACTTAAG
                      ____________________________________________________________
consensus ATTTTTCACCTTGATCTCCCCTTCCTTTGGATCTCCTACTTCAACATCCTCCCACTTAAG
 
. : . : . : . : . : . :
JMSF042F04+ AACCTCAGGACCACCGAGCTCGTGAACCCTAATAGCTTTGACCATTTTGGCTGTTGTGGC
JMSF045P08+ AACCTCAGGACCACCGAGCTCGTGAACCCTAATAGCTTTGACCATTTTGGCTGTTGTGGC
JMSF043F02+ AACCTCAGGACCACCGAGCTCGTGAACCCTAATAGCTTTGACCATTTTGGCTGTTGTGGC
                      ____________________________________________________________
consensus AACCTCAGGACCACCGAGCTCGTGAACCCTAATAGCTTTGACCATTTTGGCTGTTGTGGC
 
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JMSF042F04+ TATTGTTTCCAGCGATGTAGAGTGAGCTCTCAGTATAAGAGGAACTCTGGTCTTCTCTTT
JMSF045P08+ TATTGTTTCCAGCGATGTAGAGTGAGCTCTCAGTATAAGAGGAACTCTGGTCTTCTCTTT
JMSF043F02+ TATTGTTTCCAGCGATGTAGAGTGAGCTCTCAGTATAAGAGGAACTCTGGTCTTCTCTTT
                      ____________________________________________________________
consensus TATTGTTTCCAGCGATGTAGAGTGAGCTCTCAGTATAAGAGGAACTCTGGTCTTCTCTTT
 
. : . : . : . : . : . :
JMSF042F04+ AGCAGCGTTTCGTAGTATACTACTTATTATAGCAGGTGCCGGAGTGACGTGGTCAACTGA
JMSF045P08+ AGCAGCGTTTCGTAGTATACTACTTATTATAGCAGGTGCCGGAGTGACGTGGTCAACTGA
JMSF043F02+ AGCAGCGTTTCGTAGTATACTACTTATTATAGCAGGTGCCGGAGTGACGTGGTCAACTGA
                      ____________________________________________________________
consensus AGCAGCGTTTCGTAGTATACTACTTATTATAGCAGGTGCCGGAGTGACGTGGTCAACTGA
 
. : . : . : . : . : . :
JMSF042F04+ GAAATCCGGTTTGCCTAC
JMSF045P08+ GAAATCCGGTTTGCCTAC
JMSF043F02+ GAAATCCGGTTTGCCTACTGCGAGGAAAGAAGACCGTGGAACCTGACGGTTGCGATGGCC
                      ____________________________________________________________
consensus GAAATCCGGTTTGCCTACTGCGAGGAAAGAAGACCGTGGAACCTGACGGTTGCGATGGCC