Contig 013517:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS014H08Sequence555013517 (5)emb|CDP07144.1|3e-56unnamed protein product [Coffea canephora]
JMFS082H10Sequence609013517 (5)emb|CDP07144.1|4e-67unnamed protein product [Coffea canephora]
JMFS139G10Sequence626013517 (5)emb|CDP07144.1|1e-54unnamed protein product [Coffea canephora]
JMSF043C14Sequence783013517 (5)emb|CDP07144.1|3e-66unnamed protein product [Coffea canephora]751021561ref|XP_009787729.1|8e-73PREDICTED: E3 SUMO-protein ligase SIZ1 isoform X2 [Nicotiana sylvestris]
JMSF048C09Sequence682013517 (5)ref|XP_009617749.1|3e-71PREDICTED: E3 SUMO-protein ligase SIZ1 isoform X3 [Nicotiana tomentosiformis]697007197 (2)

Alignment

This contig is upended


. : . : . : . : . : . :
JMFS014H08+ TCGCACTTAATCATT
JMFS139G10+ CTTAATCATT
                      ____________________________________________________________
consensus TCGCACTTAATCATT
 
. : . : . : . : . : . :
JMFS014H08+ GACTCGGTTTGTAAGGAGCTTCCACAGGGACAACGAATCTTATCCATCTGGTAAGGTTCT
JMFS139G10+ GACTCGGTNTGTAAGGAGCTTCCACAGGGACAACGAATCTTATCCATCTGGTAAGGTTCT
                      ____________________________________________________________
consensus GACTCGGTTTGTAAGGAGCTTCCACAGGGACAACGAATCTTATCCATCTGGTAAGGTTCT
 
. : . : . : . : . : . :
JMFS014H08+ TCTACCACCTCTTCTTTTAACTTGACAGTGCTGCTATCTGAAACTCCCTGCGATTTTGAT
JMFS082H10+ GCGATTTTGAT
JMSF048C09+ GCGATTTTGAT
JMFS139G10+ TCTACCACCTCTTCTTTTAACTTGACAGTGCTGCTATCTGAAACTCCCTGCGATTTTGAT
JMSF043C14+ GCGATTTTGAT
                      ____________________________________________________________
consensus TCTACCACCTCTTCTTTTAACTTGACAGTGCTGCTATCTGAAACTCCCTGCGATTTTGAT
 
. : . : . : . : . : . :
JMFS014H08+ GCCAAGTCAGGTGCTCCAGAAACCTGCATTTTCCTGTAAATGTCATCCACGAGTTTTGCC
JMFS082H10+ GCCAAGTCAGGTGCTCCAGAAACCTGCATTTTCCTGTAAATGTCATCCACGAGTTTTGCC
JMSF048C09+ GCCAAGTCAGGTGCTCCAGAAACCTGCATTTTCCTGTAAATGTCATCCACGAGTTTTGCC
JMFS139G10+ GCCAAGTCAGGTGCTCCAGAAACCTGCATTTTCCTGTAAATGTCATCCACGAGTTTTGCC
JMSF043C14+ GCCAAGTCAGGTGCTCCAGAAACCTGCATTTTCCTGTAAATGTCATCCACGAGTTTTGCC
                      ____________________________________________________________
consensus GCCAAGTCAGGTGCTCCAGAAACCTGCATTTTCCTGTAAATGTCATCCACGAGTTTTGCC
 
. : . : . : . : . : . :
JMFS014H08+ ACCTCTTCCTTGCCAACAGTATTTTTCTTTGTGCAGGCTCCTGAAACCGGGTCATCAGAC
JMFS082H10+ ACCTCTTCCTTGCCAACAGTATTTTTCTTTGTGCAGGCTCCTGAAACCGGGTCATCAGAC
JMSF048C09+ ACCTCTTCCTTGCCAACAGTATTTTTCTTTGTGCAGGCTCCTGAAACCGGGTCATCAGAC
JMFS139G10+ ACCTCTTCCTTGCCAACAGTATTTTTCTTTGTGCAGGCTCCTGAAACCGGGTCATCAGAC
JMSF043C14+ ACCTCTTCCTTGCCAACAGTATTTTTCTTTGTGCAGGCTCCTGAAACCGGGTCATCAGAC
                      ____________________________________________________________
consensus ACCTCTTCCTTGCCAACAGTATTTTTCTTTGTGCAGGCTCCTGAAACCGGGTCATCAGAC
 
. : . : . : . : . : . :
JMFS014H08+ AGAATAGCTAGTAGTCGGTCAACGAGGTCCTGCTTCTTTCCTTGCTTTGAAAGACCAAGT
JMFS082H10+ AGAATAGCTAGTAGTCGGTCAACGAGGTCCTGCTTCTTTCCTTGCTTTGAAAGACCAAGT
JMSF048C09+ AGAATAGCTAGTAGTCGGTCAACGAGGTCCTGCTTCTTTCCTTGCTTTGAAAGACCAAGT
JMFS139G10+ AGAATAGCTAGTAGTCGGTCAACGAGGTCCTGCTTCTTTCCTTGCTTTGAAAGACCAAGT
JMSF043C14+ AGAATAGCTAGTAGTCGGTCAACGAGGTCCTGCTTCTTTCCTTGCTTTGAAAGACCAAGT
                      ____________________________________________________________
consensus AGAATAGCTAGTAGTCGGTCAACGAGGTCCTGCTTCTTTCCTTGCTTTGAAAGACCAAGT
 
. : . : . : . : . : . :
JMFS014H08+ TGAGTGAGAACATCCTTGAGTTCCTTTATCCGGAAATATGCCAGCTTATCCTTGCAGCCA
JMFS082H10+ TGAGTGAGAACATCCTTGAGTTCCTTTATCCGGAAATATGCCAGCTTATCCTTGCAGCCA
JMSF048C09+ TGAGTGAGAACATCCTTGAGTTCCTTTATCCGGAAATATGCCAGCTTATCCTTGCAGCCA
JMFS139G10+ TGAGTGAGAACATCCTTGAGTTCCTTTATCCGGAAATATGCCAGCTTATCCTTGCAGCCA
JMSF043C14+ TGAGTGAGAACATCCTTGAGTTCCTTTATCCGGAAATATGCCAGCTTATCCTTGCAGCCA
                      ____________________________________________________________
consensus TGAGTGAGAACATCCTTGAGTTCCTTTATCCGGAAATATGCCAGCTTATCCTTGCAGCCA
 
. : . : . : . : . : . :
JMFS014H08+ GCCACCAAATCCATTTCTACACCCCTCTATGACGGTGGAGGCAAGCAAGTATTCCTCGGT
JMFS082H10+ GCCACCAAATCCATTTCTACACCCCTCTATGACGGTGGAGGCAAGCAAGTATTCCTCGGT
JMSF048C09+ GCCACCAAATCCATTTCTACACCCCTCTATGACGGTGGAGGCAAGCAAGTATTCCTCGGT
JMFS139G10+ GCCACCAAATCCATTTCTACACCCCTCTATGACGGTGGAGGCAAGCAAGTATTCCTCGGT
JMSF043C14+ GCCACCAAATCCATTTCTACACCCCTCTATGACGGTGGAGGCAAGCAAGTATTCCTCGGT
                      ____________________________________________________________
consensus GCCACCAAATCCATTTCTACACCCCTCTATGACGGTGGAGGCAAGCAAGTATTCCTCGGT
 
. : . : . : . : . : . :
JMFS014H08+ TGTCGAATAATCTGGAAACGCGGAATAGATGAAAACCTCTAATTTTGAGGGTTTTTGAGT
JMFS082H10+ TGTCGAATAATCTGGAAACGCGGAATAGATGAAAACCTCTAATTTTGAGGGTTTTTGAGT
JMSF048C09+ TGTCGAATAATCT
JMFS139G10+ TGTCGAATAATCTGGAAACGCGGAATAGATGAAAACCTCTAATTTTGAGGGTTTTTGAGT
JMSF043C14+ TGTCGAATAATCTGGAAACGCGGAATAGATGAAAACCTCTAATTTTGAGGGTTTTTGAGT
                      ____________________________________________________________
consensus TGTCGAATAATCTGGAAACGCGGAATAGATGAAAACCTCTAATTTTGAGGGTTTTTGAGT
 
. : . : . : . : . : . :
JMFS014H08+ GACCTAAGTCGGACTTGTGGTCACAGACGCACGCCGACTAAACCTACTCTTCTCTCTCTC
JMFS082H10+ GACCTAAGTCGGACTTGTGGTCACAGACGCACGCCGACTAAACCTACTCTTCTCTCTCTC
JMFS139G10+ GACCTAAGTCGGACTTGTGGTCACAGACGCACGCCGACTAAACCTACTCTTCTCTCTCTC
JMSF043C14+ GACCTAAGTCGGACTTGTGGTCACAGACGCACGCCGACTAAACCTACTCTTCTCTCTCTC
                      ____________________________________________________________
consensus GACCTAAGTCGGACTTGTGGTCACAGACGCACGCCGACTAAACCTACTCTTCTCTCTCTC
 
. : . : . : . : . : . :
JMFS082H10+ TCTC
JMFS139G10+ TCTCTCTTCCTCCACCTCATCAGCAATCGTGTTGCTTTGCTAATTTTGACCCGAATGAAA
JMSF043C14+ TCTCTCTTCCTCCACCTCATCAGCAATCGTGTTGCTTTGCTAATTTTGACCCGAATGAAA
                      ____________________________________________________________
consensus TCTCTCTTCCTCCACCTCATCAGCAATCGTGTTGCTTTGCTAATTTTGACCCGAATGAAA
 
. : . : . : . : . : . :
JMFS139G10+ GAAGGCGAATCCAGTA
JMSF043C14+ GAAGGCGAATCCAGTATTCTCCTCCGTATTACGGCCGGGACATGCTTCTCTCAAATCTGG
                      ____________________________________________________________
consensus GAAGGCGAATCCAGTATTCTCCTCCGTATTACGGCCGGGACATGCTTCTCTCAAATCTGG
 
. : . : . : . : . : . :
JMSF043C14+ TTAATTTCGCACAATTAAATCCGGGTTTTGGTTCTCTACTTTCAAGTGTACCTGCTTTTC
                      ____________________________________________________________
consensus TTAATTTCGCACAATTAAATCCGGGTTTTGGTTCTCTACTTTCAAGTGTACCTGCTTTTC