| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFS014H08 | Sequence | 555 | 013517 (5) | emb|CDP07144.1| | 3e-56 | unnamed protein product [Coffea canephora] | |||||
| JMFS082H10 | Sequence | 609 | 013517 (5) | emb|CDP07144.1| | 4e-67 | unnamed protein product [Coffea canephora] | |||||
| JMFS139G10 | Sequence | 626 | 013517 (5) | emb|CDP07144.1| | 1e-54 | unnamed protein product [Coffea canephora] | |||||
| JMSF043C14 | Sequence | 783 | 013517 (5) | emb|CDP07144.1| | 3e-66 | unnamed protein product [Coffea canephora] | 751 | 021561 | ref|XP_009787729.1| | 8e-73 | PREDICTED: E3 SUMO-protein ligase SIZ1 isoform X2 [Nicotiana sylvestris] |
| JMSF048C09 | Sequence | 682 | 013517 (5) | ref|XP_009617749.1| | 3e-71 | PREDICTED: E3 SUMO-protein ligase SIZ1 isoform X3 [Nicotiana tomentosiformis] | 697 | 007197 (2) | |||
This contig is upended
. : . : . : . : . : . :
JMFS014H08+ TCGCACTTAATCATT
JMFS139G10+ CTTAATCATT
____________________________________________________________
consensus TCGCACTTAATCATT
. : . : . : . : . : . :
JMFS014H08+ GACTCGGTTTGTAAGGAGCTTCCACAGGGACAACGAATCTTATCCATCTGGTAAGGTTCT
JMFS139G10+ GACTCGGTNTGTAAGGAGCTTCCACAGGGACAACGAATCTTATCCATCTGGTAAGGTTCT
____________________________________________________________
consensus GACTCGGTTTGTAAGGAGCTTCCACAGGGACAACGAATCTTATCCATCTGGTAAGGTTCT
. : . : . : . : . : . :
JMFS014H08+ TCTACCACCTCTTCTTTTAACTTGACAGTGCTGCTATCTGAAACTCCCTGCGATTTTGAT
JMFS082H10+ GCGATTTTGAT
JMSF048C09+ GCGATTTTGAT
JMFS139G10+ TCTACCACCTCTTCTTTTAACTTGACAGTGCTGCTATCTGAAACTCCCTGCGATTTTGAT
JMSF043C14+ GCGATTTTGAT
____________________________________________________________
consensus TCTACCACCTCTTCTTTTAACTTGACAGTGCTGCTATCTGAAACTCCCTGCGATTTTGAT
. : . : . : . : . : . :
JMFS014H08+ GCCAAGTCAGGTGCTCCAGAAACCTGCATTTTCCTGTAAATGTCATCCACGAGTTTTGCC
JMFS082H10+ GCCAAGTCAGGTGCTCCAGAAACCTGCATTTTCCTGTAAATGTCATCCACGAGTTTTGCC
JMSF048C09+ GCCAAGTCAGGTGCTCCAGAAACCTGCATTTTCCTGTAAATGTCATCCACGAGTTTTGCC
JMFS139G10+ GCCAAGTCAGGTGCTCCAGAAACCTGCATTTTCCTGTAAATGTCATCCACGAGTTTTGCC
JMSF043C14+ GCCAAGTCAGGTGCTCCAGAAACCTGCATTTTCCTGTAAATGTCATCCACGAGTTTTGCC
____________________________________________________________
consensus GCCAAGTCAGGTGCTCCAGAAACCTGCATTTTCCTGTAAATGTCATCCACGAGTTTTGCC
. : . : . : . : . : . :
JMFS014H08+ ACCTCTTCCTTGCCAACAGTATTTTTCTTTGTGCAGGCTCCTGAAACCGGGTCATCAGAC
JMFS082H10+ ACCTCTTCCTTGCCAACAGTATTTTTCTTTGTGCAGGCTCCTGAAACCGGGTCATCAGAC
JMSF048C09+ ACCTCTTCCTTGCCAACAGTATTTTTCTTTGTGCAGGCTCCTGAAACCGGGTCATCAGAC
JMFS139G10+ ACCTCTTCCTTGCCAACAGTATTTTTCTTTGTGCAGGCTCCTGAAACCGGGTCATCAGAC
JMSF043C14+ ACCTCTTCCTTGCCAACAGTATTTTTCTTTGTGCAGGCTCCTGAAACCGGGTCATCAGAC
____________________________________________________________
consensus ACCTCTTCCTTGCCAACAGTATTTTTCTTTGTGCAGGCTCCTGAAACCGGGTCATCAGAC
. : . : . : . : . : . :
JMFS014H08+ AGAATAGCTAGTAGTCGGTCAACGAGGTCCTGCTTCTTTCCTTGCTTTGAAAGACCAAGT
JMFS082H10+ AGAATAGCTAGTAGTCGGTCAACGAGGTCCTGCTTCTTTCCTTGCTTTGAAAGACCAAGT
JMSF048C09+ AGAATAGCTAGTAGTCGGTCAACGAGGTCCTGCTTCTTTCCTTGCTTTGAAAGACCAAGT
JMFS139G10+ AGAATAGCTAGTAGTCGGTCAACGAGGTCCTGCTTCTTTCCTTGCTTTGAAAGACCAAGT
JMSF043C14+ AGAATAGCTAGTAGTCGGTCAACGAGGTCCTGCTTCTTTCCTTGCTTTGAAAGACCAAGT
____________________________________________________________
consensus AGAATAGCTAGTAGTCGGTCAACGAGGTCCTGCTTCTTTCCTTGCTTTGAAAGACCAAGT
. : . : . : . : . : . :
JMFS014H08+ TGAGTGAGAACATCCTTGAGTTCCTTTATCCGGAAATATGCCAGCTTATCCTTGCAGCCA
JMFS082H10+ TGAGTGAGAACATCCTTGAGTTCCTTTATCCGGAAATATGCCAGCTTATCCTTGCAGCCA
JMSF048C09+ TGAGTGAGAACATCCTTGAGTTCCTTTATCCGGAAATATGCCAGCTTATCCTTGCAGCCA
JMFS139G10+ TGAGTGAGAACATCCTTGAGTTCCTTTATCCGGAAATATGCCAGCTTATCCTTGCAGCCA
JMSF043C14+ TGAGTGAGAACATCCTTGAGTTCCTTTATCCGGAAATATGCCAGCTTATCCTTGCAGCCA
____________________________________________________________
consensus TGAGTGAGAACATCCTTGAGTTCCTTTATCCGGAAATATGCCAGCTTATCCTTGCAGCCA
. : . : . : . : . : . :
JMFS014H08+ GCCACCAAATCCATTTCTACACCCCTCTATGACGGTGGAGGCAAGCAAGTATTCCTCGGT
JMFS082H10+ GCCACCAAATCCATTTCTACACCCCTCTATGACGGTGGAGGCAAGCAAGTATTCCTCGGT
JMSF048C09+ GCCACCAAATCCATTTCTACACCCCTCTATGACGGTGGAGGCAAGCAAGTATTCCTCGGT
JMFS139G10+ GCCACCAAATCCATTTCTACACCCCTCTATGACGGTGGAGGCAAGCAAGTATTCCTCGGT
JMSF043C14+ GCCACCAAATCCATTTCTACACCCCTCTATGACGGTGGAGGCAAGCAAGTATTCCTCGGT
____________________________________________________________
consensus GCCACCAAATCCATTTCTACACCCCTCTATGACGGTGGAGGCAAGCAAGTATTCCTCGGT
. : . : . : . : . : . :
JMFS014H08+ TGTCGAATAATCTGGAAACGCGGAATAGATGAAAACCTCTAATTTTGAGGGTTTTTGAGT
JMFS082H10+ TGTCGAATAATCTGGAAACGCGGAATAGATGAAAACCTCTAATTTTGAGGGTTTTTGAGT
JMSF048C09+ TGTCGAATAATCT
JMFS139G10+ TGTCGAATAATCTGGAAACGCGGAATAGATGAAAACCTCTAATTTTGAGGGTTTTTGAGT
JMSF043C14+ TGTCGAATAATCTGGAAACGCGGAATAGATGAAAACCTCTAATTTTGAGGGTTTTTGAGT
____________________________________________________________
consensus TGTCGAATAATCTGGAAACGCGGAATAGATGAAAACCTCTAATTTTGAGGGTTTTTGAGT
. : . : . : . : . : . :
JMFS014H08+ GACCTAAGTCGGACTTGTGGTCACAGACGCACGCCGACTAAACCTACTCTTCTCTCTCTC
JMFS082H10+ GACCTAAGTCGGACTTGTGGTCACAGACGCACGCCGACTAAACCTACTCTTCTCTCTCTC
JMFS139G10+ GACCTAAGTCGGACTTGTGGTCACAGACGCACGCCGACTAAACCTACTCTTCTCTCTCTC
JMSF043C14+ GACCTAAGTCGGACTTGTGGTCACAGACGCACGCCGACTAAACCTACTCTTCTCTCTCTC
____________________________________________________________
consensus GACCTAAGTCGGACTTGTGGTCACAGACGCACGCCGACTAAACCTACTCTTCTCTCTCTC
. : . : . : . : . : . :
JMFS082H10+ TCTC
JMFS139G10+ TCTCTCTTCCTCCACCTCATCAGCAATCGTGTTGCTTTGCTAATTTTGACCCGAATGAAA
JMSF043C14+ TCTCTCTTCCTCCACCTCATCAGCAATCGTGTTGCTTTGCTAATTTTGACCCGAATGAAA
____________________________________________________________
consensus TCTCTCTTCCTCCACCTCATCAGCAATCGTGTTGCTTTGCTAATTTTGACCCGAATGAAA
. : . : . : . : . : . :
JMFS139G10+ GAAGGCGAATCCAGTA
JMSF043C14+ GAAGGCGAATCCAGTATTCTCCTCCGTATTACGGCCGGGACATGCTTCTCTCAAATCTGG
____________________________________________________________
consensus GAAGGCGAATCCAGTATTCTCCTCCGTATTACGGCCGGGACATGCTTCTCTCAAATCTGG
. : . : . : . : . : . :
JMSF043C14+ TTAATTTCGCACAATTAAATCCGGGTTTTGGTTCTCTACTTTCAAGTGTACCTGCTTTTC
____________________________________________________________
consensus TTAATTTCGCACAATTAAATCCGGGTTTTGGTTCTCTACTTTCAAGTGTACCTGCTTTTC