| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF011B10 | Sequence | 603 | 013515 (10) | ref|XP_007034402.1| | 1e-47 | Type 1 membrane protein, putative isoform 3 [Theobroma cacao] gb|EOY05328.1| Typ | 802 | 013515 (10) | ref|XP_009601804.1| | 166 | PREDICTED: uncharacterized protein LOC104097012 [Nicotiana tomentosiformis] |
| JMFF048C16 | Sequence | 407 | 013515 (10) | ref|XP_009785971.1| | 113 | PREDICTED: uncharacterized protein LOC104234156 [Nicotiana sylvestris] | |||||
| JMFN009O18 | Sequence | 339 | 013515 (10) | ref|XP_010241117.1| | 116 | PREDICTED: uncharacterized protein LOC104585816 [Nelumbo nucifera] | |||||
| JMSF003H07 | Sequence | 396 | 013515 (10) | ref|XP_009785971.1| | 113 | PREDICTED: uncharacterized protein LOC104234156 [Nicotiana sylvestris] | 789 | 013515 (10) | ref|XP_009601804.1| | 178 | PREDICTED: uncharacterized protein LOC104097012 [Nicotiana tomentosiformis] |
| JMSF019C18 | Sequence | 497 | 013515 (10) | ref|XP_009785971.1| | 133 | PREDICTED: uncharacterized protein LOC104234156 [Nicotiana sylvestris] | 809 | 013515 (10) | ref|XP_009601804.1| | 194 | PREDICTED: uncharacterized protein LOC104097012 [Nicotiana tomentosiformis] |
| JMSF042L19 | Sequence | 762 | 013515 (10) | ref|XP_009785971.1| | 217 | PREDICTED: uncharacterized protein LOC104234156 [Nicotiana sylvestris] | 738 | 013515 (10) | ref|XP_009601804.1| | 163 | PREDICTED: uncharacterized protein LOC104097012 [Nicotiana tomentosiformis] |
This contig is upended
. : . : . : . : . : . :
rJMSF042L19- ATCCATCTCCAATTTT
rJMFF011B10- TTGATTGAAAAAGGTATCCATCCATCTCCAATTTT
____________________________________________________________
consensus TTGATTGAAAAAGGTATCCATCCATCTCCAATTTT
. : . : . : . : . : . :
rJMSF042L19- TAAAAAAATTATTTTGTTTCTAAATTACATTACAAAGACAATATAAATTTAAACCATAAG
rJMFF011B10- TAAAAAAATTATTTTGTTTCTAAATTACATTACAAAGACAATATAAATTTAAACCATAAG
rJMSF003H07- AATTACATTACAAAGACAATATAAATTTAAACCATAAG
rJMSF019C18- AATTACATTACAAAGACAATATAAATTTAAACCATAAG
____________________________________________________________
consensus TAAAAAAATTATTTTGTTTCTAAATTACATTACAAAGACAATATAAATTTAAACCATAAG
. : . : . : . : . : . :
rJMSF042L19- CTAACTAATACGACACAACGGAGAAAAGGAAAACAATTGAGTTTCTCTCCTCTAACCTCT
rJMFF011B10- CTAACTAATACGACACAACGGAGAAAAGGAAAACAATTGAGTTTCTCTCCTCTAACCTCT
rJMSF003H07- CTAACTAATACGACACAACGGAGAAAAGGAAAACAATTGAGTTTCTCTCCTCTAACCTCT
rJMSF019C18- CTAACTAATACGACACAACGGAGAAAAGGAAAACAATTGAGTTTCTCTCCTCTAACCTCT
____________________________________________________________
consensus CTAACTAATACGACACAACGGAGAAAAGGAAAACAATTGAGTTTCTCTCCTCTAACCTCT
. : . : . : . : . : . :
rJMSF042L19- TACCTCTTGCCAGTTGCCACCTACAACCTGATCAGAAACATTTATCACACGCCAACTTCC
rJMFF011B10- TACCTCTTGCCAGTTGCCACCTACAACCTGATCAGAAACATTTATCACACGCCAACTTCC
rJMSF003H07- TACCTCTTGCCAGTTGCCACCTACAACCTGATCAGAAACATTTATCACACGCCAACTTCC
rJMSF019C18- TACCTCTTGCCAGTTGCCACCTACAACCTGATCAGAAACATTTATCACACGCCAACTTCC
____________________________________________________________
consensus TACCTCTTGCCAGTTGCCACCTACAACCTGATCAGAAACATTTATCACACGCCAACTTCC
. : . : . : . : . : . :
rJMSF042L19- CGGAAGTTTACAAGCATAATTAACCAGCCATCATTTTATTTTTAACAGTGATGGACATTT
rJMFF011B10- CGGAAGTTTACAAGCATAATTAACCAGCCATCATTTTATTTTTAACAGTGATGGACATTT
rJMSF003H07- CGGAAGTTTACAAGCATAATTAACCAGCCATCATTTTATTTTTAACAGTGATGGACATTT
rJMSF019C18- CGGAAGTTTACAAGCATAATTAACCAGCCATCATTTTATTTTTAACAGTGATGGACATTT
____________________________________________________________
consensus CGGAAGTTTACAAGCATAATTAACCAGCCATCATTTTATTTTTAACAGTGATGGACATTT
. : . : . : . : . : . :
rJMSF042L19- CAAAGGAGAAATAGGAGTAACAGACGCATCACAAATATCTTATACCAGGGTTCTGACCAC
rJMFF011B10- CAAAGGAGAAATAGGAGTAACAGACGCATCACAAATATCTTATACCAGGGTTCTGACCAC
rJMSF003H07- CAAAGGAGAAATAGGAGTAACAGACGCATCACAAATATCTTATACCAGGGTTCTGACCAC
rJMSF019C18- CAAAGGAGAAATAGGAGTAACAGACGCATCACAAATATCTTATACCAGGGTTCTGACCAC
____________________________________________________________
consensus CAAAGGAGAAATAGGAGTAACAGACGCATCACAAATATCTTATACCAGGGTTCTGACCAC
. : . : . : . : . : . :
rJMSF042L19- ATCTTCAATCTCCCAGTGATTGAATGCAGCACTGGTAAAACCTTAGTCGAGCTTGACATT
rJMFF011B10- ATCTTCAATCTCCCAGTGATTGAATGCAGCACTGGTAAAACCTTAGTCGAGCTTGACATT
rJMSF003H07- ATCTTCAATCTCCCAGTGATTGAATGCAGCACTGGTAAAACCTTAGTCGAGCTTGACATT
rJMSF019C18- ATCTTCAATCTCCCAGTGATTGAATGCAGCACTGGTAAAACCTTAGTCGAGCTTGACATT
____________________________________________________________
consensus ATCTTCAATCTCCCAGTGATTGAATGCAGCACTGGTAAAACCTTAGTCGAGCTTGACATT
. : . : . : . : . : . :
rJMSF042L19- AGAATAGAGAAGTGTGTCCCTTGTGAGAGGCATGTTGAGAAGAAAGTAAATCCCTAAAAG
rJMFF011B10- AGAATAGAGAAGTGTGTCCCTTGTGAGAGGCATGTTGAGAAGAAAGTAAATCCCTAAAAG
rJMSF003H07- AGAATAGAGAAGTGTGTCCCTTGTGAGAGGCATGTTGAGAAGAAAGTAAATCCCTAAAAG
rJMSF019C18- AGAATAGAGAAGTGTGTCCCTTGTGAGAGGCATGTTGAGAAGAAAGTAAATCCCTAAAAG
____________________________________________________________
consensus AGAATAGAGAAGTGTGTCCCTTGTGAGAGGCATGTTGAGAAGAAAGTAAATCCCTAAAAG
. : . : . : . : . : . :
rJMSF042L19- AGTTGCAATTATAAGCATGATTCCCGTGGTCCATGCTACTGTTTTTCTAACCAATTTCTC
rJMFF011B10- AGTTGCAATTATAAGCATGATTCCCGTGGTCCATGCTACTGTTTTTCTAACCAATTTCTC
rJMSF003H07- AGTTGCAATTATAAGCATGATTCCCGTGGTCCATGCTACTGTTTTTCTAACCAATTTCTC
rJMSF019C18- AGTTGCAATTATAAGCATGATTCCCGTGGTCCATGCTACTGTTTTTCTAACCAATTTCTC
____________________________________________________________
consensus AGTTGCAATTATAAGCATGATTCCCGTGGTCCATGCTACTGTTTTTCTAACCAATTTCTC
. : . : . : . : . : . :
rJMSF042L19- AGCTTCTTTAGCAAGAGTGGCATTTTTTAAGGATTTTGTTTCCTCCAGCCAGCGTGCAGA
rJMFF011B10- AGCTTCTTTAGCAAGAGTGGCATTTTTTAAGGATTTTGTTTCCTCCAGCCAGCGTGCAGA
rJMSF003H07- AGCTTCTTTAGCAAGAGTGGCATTTTTTAAGGATTTTGTTTCCTCCAGCCAGCGTGCAGA
rJMSF019C18- AGCTTCTTTAGCAAGAGTGGCATTTTTTAAGGATTTTGTTTCCTCCAGCCAGCGTGCAGA
____________________________________________________________
consensus AGCTTCTTTAGCAAGAGTGGCATTTTTTAAGGATTTTGTTTCCTCCAGCCAGCGTGCAGA
. : . : . : . : . : . :
rJMSF042L19- TGGTCGAGAATCAAAGATTAAGTTCAGCATTGGCTCAGATGCTGGGTTGCAGACAATGAC
rJMFF011B10- TGGTCGAGAATCAAAGATTAAGTTCAGCATTGGCTCAGATGCTGGATTGCAGACAATGAC
rJMSF003H07- TGGTCGAGAATCAAAGATTAAGTTCAGCATTGGCTCAGATGCTGGATTGCAGACAATGAC
rJMSF019C18- TGGTCGAGAATCAAAGATTAAGTTCAGCATTGGCTCAGATGCTGGATTGCAGACAATGAC
____________________________________________________________
consensus TGGTCGAGAATCAAAGATTAAGTTCAGCATTGGCTCAGATGCTGGATTGCAGACAATGAC
. : . : . : . : . : . :
rJMSF042L19- TCCAACAATTTCACCTTTATATGCGCCACGTAATGAATTAAATATCTTCGAAATTACATG
rJMFF011B10- TCCAACAATTTCACCTTTATATGCGTCACGTAATGAATTAAATATCTTCGAAATTACATG
rJMSF003H07- TCCAACAATTTCACCTTTATATGCGTCACGTAATGAATTAAATATCTTCGAAATTACATG
rJMSF019C18- TCCAACAATTTCACCTTTATATGCGTCACGTAATGAATTAAATATCTTCGAAATTACATG
____________________________________________________________
consensus TCCAACAATTTCACCTTTATATGCGTCACGTAATGAATTAAATATCTTCGAAATTACATG
. : . : . : . : . : . :
rJMSF042L19- AACAGACAATCTAACAGCATGTGCAACATTTTCTATTCCATCATTGCTTTTCATTGCCTC
rJMFF011B10- AACAGACAATCTAACAGCATGTGCAACATTTTCTATTCCATCATTGCTTTTCATTGCCTC
rJMSF003H07- AACAGACAATCTAACAGCATGTGCAACATTTTCTATTCCATCATTGCTTTTCATTGCCTC
rJMSF019C18- AACAGACAATCTAACAGCATGTGCAACATTTTCTATTCCATCATTGCTTTTCATTGCCTC
____________________________________________________________
consensus AACAGACAATCTAACAGCATGTGCAACATTTTCTATTCCATCATTGCTTTTCATTGCCTC
. : . : . : . : . : . :
rJMSF042L19- AA
rJMFF011B10- AATGGCATTGGAATCTTCCAGTAATTAGCTCAGCTATACTTTTTTCA
rJMSF003H07- AATGGCATT-GAATCTTCCAGTAATTAGCTCAGCTATACTTTTTTCACTTC
rJMSF019C18- AATGGCATT-GAATCTTCCAGTAATTAGCTCAGCTATACTTTTTTCACTTCCAGACAAAT
JMSF042L19+ CAGTAATTAGCTCAGCTATACTTTTTTCACTTCCAGACAAAT
____________________________________________________________
consensus AATGGCATT-GAATCTTCCAGTAATTAGCTCAGCTATACTTTTTTCACTTCCAGACAAAT
. : . : . : . : . : . :
rJMSF019C18- CATGATGCAGCTCCNTTGCCTTTGGACTAT
JMSF042L19+ CATGATGCAGCTCCTTTGCCTTTTGACTATTGTAGGTGAGTAAGATAAGGCTTCTTATAA
____________________________________________________________
consensus CATGATGCAGCTCCTTTGCCTTTTGACTATTGTAGGTGAGTAAGATAAGGCTTCTTATAA
. : . : . : . : . : . :
JMFF011B10+ CCAAAGGGA
JMSF042L19+ ACTCTTTCACTGCTGTTTTGGACAAGTCAAATTTTAATTCAGCTTCATTCTCCAAAGGGA
____________________________________________________________
consensus ACTCTTTCACTGCTGTTTTGGACAAGTCAAATTTTAATTCAGCTTCATTCTCCAAAGGGA
. : . : . : . : . : . :
JMFF011B10+ TAGTCAGTTCCCCCATCAATGGTTCTCCAGCAACAGTAACATATGAGCCGCCCAGCCACG
JMSF042L19+ TAGTCAGTTCCCCCATCAATGGTTCTCCAGCAACAGTAACATATGAGCCGCCCAGCCACG
____________________________________________________________
consensus TAGTCAGTTCCCCCATCAATGGTTCTCCAGCAACAGTAACATATGAGCCGCCCAGCCACG
. : . : . : . : . : . :
JMFN009O18+ TCTTTCTCCGATAATTCAGCCTCTGAATCCAAATTCAAGGGCT
JMFF011B10+ ATGCAAAATCACTTAGTTCTTTCTCCGATAATTCAGCCTCTGAATCCAAATTCAAGGGCT
JMSF019C18+ TCTGAATCCAAATTCAAGGGCT
JMSF042L19+ ATGCAAAATCACTTAGTTCTTTCTCCGATAATTCAGCCTCTGAATCCAAATTCAAGGGCT
____________________________________________________________
consensus ATGCAAAATCACTTAGTTCTTTCTCCGATAATTCAGCCTCTGAATCCAAATTCAAGGGCT
. : . : . : . : . : . :
JMFN009O18+ CATTCAATGAGAGCACAGATACTTCCTCATCACCTGGAAGTTGAATGTCAGCATTATTTG
JMFF011B10+ CATTCAATGAGAGCACAGATACTTCCTCATCACCTGGAAGTTGAATGTCAGCATTATTTG
JMSF019C18+ CATTCAATGAGAGCACAGATACTTCCTCATCACCTGGAAGTTGAATGTCAGCATTATTTG
JMSF042L19+ CATTCAATGAGAGCACAGATACTTCCTCATCACCTGGAAGTTGAATGTCAGCATTATTTG
____________________________________________________________
consensus CATTCAATGAGAGCACAGATACTTCCTCATCACCTGGAAGTTGAATGTCAGCATTATTTG
. : . : . : . : . : . :
JMFN009O18+ TATTGCCAAGAATGTCTCTCCTATGGGTGCCACTTAAGAACTCCTTTGTGCCATCCAAAA
JMFF011B10+ TATTGCCAAGAATGTCTCTCCTATGGGTGCCACTTAAGAACTCCTTTGTGCCATCCAAAA
JMSF019C18+ TATTGCCAAGAATGTCTCTCCTATGGGTGCCACTTAAGAACTCCTTTGTGCCATCCAAAA
JMFF048C16+ ATGTCTCTCCTATGGGTGCCACTTAAGAACTCCTTTGTGCCATCCAAAA
JMSF003H07+ CCTATGGGTGCCACTTAAGAACTCCTTTGTGCCATCCAAAA
JMSF042L19+ TATTGCCAAGAATGTCTCTCCTATGGGTGCCACTTAAGAACTCCTTTGTGCCATCCAAAA
____________________________________________________________
consensus TATTGCCAAGAATGTCTCTCCTATGGGTGCCACTTAAGAACTCCTTTGTGCCATCCAAAA
. : . : . : . : . : . :
JMFN009O18+ ATTGCGACCCTTCAGCTCTGGTGACTTCTAGCAAAAAAACAGTGCGAGGTCTATCAAAGG
JMFF011B10+ ATTGCGACCCTTCAGCTCTGGTGACTTCTAGCAAAAAAACAGTGCGAGGTCTATCAAAGG
JMSF019C18+ ATTGCGACCCTTCAGCTCTGGTGACTTCTAGCAAAAAAACAGTGCGAGGTCTATCAAAGG
JMFF048C16+ ATTGCGACCCTTCAGCTCTGGTGACTTCTAGCAAAAAAACAGTGCGAGGTCTATCAAAGG
JMSF003H07+ ATTGCGACCCTTCAGCTCTGGTGACTTCTAGCAAAAAAACAGTGCGAGGTCTATCAAAGG
JMSF042L19+ ATTGCGACCCTTCAGCTCTGGTGACTTCTAGCAAAAAAACAGTGCGAGGTCTATCAAAGG
____________________________________________________________
consensus ATTGCGACCCTTCAGCTCTGGTGACTTCTAGCAAAAAAACAGTGCGAGGTCTATCAAAGG
. : . : . : . : . : . :
JMFN009O18+ GATTAGGTGCAAGTACCTCATTTAACTTAAATGAACTCTCAGCTGAAAGGGTAGCTGGAG
JMFF011B10+ GATTAGGTGCAAGTACCTCATTTAACTTAAATGAACTCTCAGCTGAAAGGGTAGCTGGAG
JMSF019C18+ GATTAGGTGCAAGTACCTCATTTAACTTAAATGAACTCTCAGCTGAAAGGGTAGCTGGAG
JMFF048C16+ GATTAGGTGCAAGTACCTCATTTAACTTAAATGAACTCTCAGCTGAAAGGGTAGCTGGAG
JMSF003H07+ GATTAGGTGCAAGTACCTCATTTAACTTAAATGAACTCTCAGCTGAAAGGGTAGCTGGAG
JMSF042L19+ GATTAGGTGCAAGTACCTCATTTAACTTAAATGAACTCTCAGCTGAAAGGGTAGCTGGAG
____________________________________________________________
consensus GATTAGGTGCAAGTACCTCATTTAACTTAAATGAACTCTCAGCTGAAAGGGTAGCTGGAG
. : . : . : . : . : . :
JMFN009O18+ GTGCAAAACCGAGTAAGACTGACACAGCAGCGCCTACTTCTGGAAGCGACAAGGAA
JMFF011B10+ GTGCAAAACCGAGTAAGACTGACACAGCAGCGCCTACTTCTGGAAGCGACAAGGAAGCAG
JMSF019C18+ GTGCAAAACCGAGTAAGACTGACACAGCAGCGCCTACTTCTGGAAGCGACAAGGAAGCAG
JMFF048C16+ GTGCAAAACCGAGTAAGACTGACACAGCAGCGCCTACTTCTGGAAGCGACAAGGAAGCAG
JMSF003H07+ GTGCAAAACCGAGTAAGACTGACACAGCAGCGCCTACTTCTGGAAGCGACAAGGAAGCAG
JMSF042L19+ GTGCAAAACCGAGTAAGACTGACACAGCAGCGCCTACTTCTGGAAGCGACAAGGAAGCAG
____________________________________________________________
consensus GTGCAAAACCGAGTAAGACTGACACAGCAGCGCCTACTTCTGGAAGCGACAAGGAAGCAG
. : . : . : . : . : . :
JMFF011B10+ TCTCATCAGACGAAGACGGACGAACATATTGGTGAGCCGAACCATCGAGGAAGTAAACTC
JMSF019C18+ TCTCATCAGACGAAGACGGACGAACATATTGGTGAGCCGAACCATCGAGGAAGTAAACTC
JMFF048C16+ TCTCATCAGACGAAGACGGACGAACATATTGGTGAGCCGAACCATCGAGGAAGTAAACTC
JMSF003H07+ TCTCATCAGACGAAGACGGACGAACATATTGGTGAGCCGAACCATCGAGGAAGTAAACTC
JMSF042L19+ TCTCATCAGACGAAGACGGACGAACATATTGGTGAGCCGAACCATCGAGGAAGTAAACTC
____________________________________________________________
consensus TCTCATCAGACGAAGACGGACGAACATATTGGTGAGCCGAACCATCGAGGAAGTAAACTC
. : . : . : . : . : . :
JMFF011B10+ CCGGGGCTCCATCGGTAACCGCGTAGTGGAGAGATAGAAGAGAGATGATGATTAGGTAGG
JMSF019C18+ CCGGGGCTCCATCGGTAACCGCGTAGTGGAGAGATAGAAGAGAGATGATGATTAGGTAGG
JMFF048C16+ CCGGGGCTCCATCGGTAACCGCGTAGTGGAGAGATAGAAGAGAGATGATGATTAGGTAGG
JMSF003H07+ CCGGGGCTCCATCGGTAACCGCGTAGTGGAGAGATAGAAGAGAGATGATGATTAGGTAGG
JMSF042L19+ CCGGGGCTCCATCGGTAACCGCGTAGTGGAGAGATAGAAGAGAGATGATGATTAGGTAGG
____________________________________________________________
consensus CCGGGGCTCCATCGGTAACCGCGTAGTGGAGAGATAGAAGAGAGATGATGATTAGGTAGG
. : . : . : . : . : . :
JMFF011B10+ TGACAGAGGAACTTCTGCTCCGATCCATTGTTGAGCCTAGAGAGAGAGAGGG
JMSF019C18+ TGACAGAGGAACTTCTGCTCCGATCCATTGTTGAGCCTAGAGAGAGAGAGGG
JMFF048C16+ TGACAGAGGAACTTCTGCTCCGATCCATTGTTGAGCCTAGAGAGAGAGAGGG
JMSF003H07+ TGACAGAGGAACTTCTGCTCCGATCCATTGTTGAGCCTAGAGAGAGAGAGGG
JMSF042L19+ TGACAGAGGAACTTCTGCTCCGATCCATTGTTGAGCCTAGAGAGAGAGAGGGTTGATTTC
____________________________________________________________
consensus TGACAGAGGAACTTCTGCTCCGATCCATTGTTGAGCCTAGAGAGAGAGAGGGTTGATTTC